Special

ENSMUSG00000044308 @ mm10

Biotype
protein_coding
Gene Symbol
Ubr3
Description
ubiquitin protein ligase E3 component n-recognin 3 [Source:MGI Symbol;Acc:MGI:1861100]
Coordinates
chr2:69897246-70024013:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
24.08
100
0
Alternative 3'ss
3
chr2:69917077-69917079
+
75.92
100
0
Alternative 3'ss
0
NA
+
48.83
72.64
0
Alternative 3'ss
2
chr2:69955965-69955966
+
51.17
72.64
0
Alternative 5'ss
0
NA
+
51.8
72.64
0
Alternative 5'ss
2
chr2:69954362-69954363
+
48.2
72.64
0
Alternative 5'ss
0
NA
+
48.44
91.63
0
Alternative 5'ss
12
chr2:69991626-69991637
+
51.56
91.63
0
Alternative 5'ss
0
NA
+
98.48
70.8
0
Alternative 5'ss
4
chr2:69993813-69993816
+
1.52
70.8
0
Exon Skipping
136
chr2:69947169-69947304
+
2.7
28.41
0
Exon Skipping
97
chr2:69959567-69959663
+
97.32
65.82
0
Exon Skipping
33
chr2:69971402-69971434
+
5.22
96.76
0
Exon Skipping
134
chr2:69999085-69999218
+
5.07
25.37
0
Exon Skipping
106
chr2:70003354-70003459
+
98.65
52.1
0
Intron Retention
91
chr2:69951409-69951499
+
2.97
100
0
Intron Retention
1151
chr2:69951590-69952740
+
1.98
100
0
Intron Retention
102
chr2:69953541-69953642
+
2.42
88.57
0
Intron Retention
1603
chr2:69954362-69955964
+
2.48
66.67
0
Intron Retention
495
chr2:69922389-69922883
+
1.62
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000144357 UBR3 1-to-1
Human hg19 ENSG00000144357 UBR3 1-to-1
Rat rn6 ENSRNOG00000008616 Ubr3 1-to-1
Cow bosTau6 ENSBTAG00000020296 UBR3 1-to-1
Chicken galGal4 ENSGALG00000009608 UBR3 1-to-1
Chicken galGal3 ENSGALG00000009608 1-to-1
Zebrafish danRer10 ENSDARG00000042508 ubr3 1-to-1
Fruitfly dm6 FBgn0260970 CG42593 1-to-1