Special

ENSRNOG00000008616 @ rn6

Biotype
protein_coding
Gene Symbol
Ubr3
Description
ubiquitin protein ligase E3 component n-recognin 3 [Source:RGD Symbol;Acc:1565257]
Coordinates
chr3:56125924-56281055:+
Assembly
rn6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]


EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
19.14
40.7
0
Alternative 3'ss
3
chr3:56152547-56152549
+
80.86
40.7
0
Alternative 5'ss
0
NA
+
57.1
53.58
0
Alternative 5'ss
12
chr3:56240198-56240209
+
42.9
53.58
0
Alternative 5'ss
0
NA
+
33.63
97.22
0
Alternative 5'ss
4
chr3:56242494-56242497
+
66.37
97.22
0
Exon Skipping
33
chr3:56213798-56213830
+
4.57
70.77
0
Exon Skipping
134
chr3:56247646-56247779
+
5.52
19.57
0
Exon Skipping
140
chr3:56196298-56196437
+
98.25
70.81
0
Intron Retention
3205
chr3:56189019-56192223
+
2.72
54.45
0
Intron Retention
900
chr3:56212550-56213449
+
2.26
63.16
0
Intron Retention
1952
chr3:56213624-56215575
+
8.16
67.79
0
Intron Retention
6486
chr3:56242494-56248979
+
6.01
42.88
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000144357 UBR3 1-to-1
Human hg19 ENSG00000144357 UBR3 1-to-1
Mouse mm10 ENSMUSG00000044308 Ubr3 1-to-1
Mouse mm9 ENSMUSG00000044308 Ubr3 1-to-1
Cow bosTau6 ENSBTAG00000020296 UBR3 1-to-1
Chicken galGal4 ENSGALG00000009608 UBR3 1-to-3
Chicken galGal3 ENSGALG00000009608 1-to-3
Zebrafish danRer10 ENSDARG00000042508 ubr3 1-to-1
Fruitfly dm6 FBgn0260970 CG42593 1-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"