Special

FBgn0264562 @ dm6

Biotype
protein_coding
Gene Symbol
Hr4
Description
The gene Hormone receptor 4 is referred to in FlyBase by the symbol DmelHr4 (CG43934, FBgn0264562). It is a protein_coding_gene from Dmel. It has 10 annotated transcripts and 10 polypeptides (8 unique). Gene sequence location is X:1941940..2007956. Its molecular function is described by: steroid hormone receptor activity; nuclear receptor activity; zinc ion binding; RNA polymerase II cis-regulatory region sequence-specific DNA binding. It is involved in the biological process described with 7 unique terms, many of which group under: cellular response to chemical stimulus; regulation of developmental process; negative regulation of RNA metabolic process; prepupal development; negative regulation of cellular response to alcohol. 73 alleles are reported. The phenotypes of these alleles manifest in: embryo; eye; somatic cell; ommatidium; head. The phenotypic classes of alleles include: size defective; lethal - all die before end of pupal stage; phenotype; some die during P-stage.
Coordinates
chrX:1941940-2007956:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
71.33
38.5
0
Alternative 3'ss
3
chrX:2002232-2002234
+
28.67
38.5
0
Exon Skipping
81
chrX:1942081-1942161
+
9.59
20.93
0
Exon Skipping
190
chrX:1989758-1989947
+
6.31
52.67
0
Exon Skipping
197
chrX:1992539-1992735
+
12.71
53.26
0
Exon Skipping
1175
chrX:1993015-1994189
+
6.79
63.62
0
Exon Skipping
497
chrX:1994402-1994898
+
19.28
93.94
0
Intron Retention
422
chrX:1942005-1942426
+
53.49
95.24
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000148200 NR6A1 1-to-1
Human hg19 ENSG00000148200 NR6A1 1-to-1
Mouse mm10 ENSMUSG00000063972 Nr6a1 1-to-1
Mouse mm9 ENSMUSG00000063972 Nr6a1 1-to-1
Rat rn6 ENSRNOG00000013232 Nr6a1 2-to-1
Cow bosTau6 ENSBTAG00000040585 NR6A1 1-to-1
Chicken galGal4 ENSGALG00000001073 NR6A1 1-to-1
Chicken galGal3 ENSGALG00000001073 F1NVM8_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000014480 nr6a1b 1-to-2
Zebrafish danRer10 ENSDARG00000101508 nr6a1a 1-to-2