Difference between revisions of "Main Page"

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<strong>MediaWiki has been installed.</strong>
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__NOTOC__
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<div class="row">
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[[File:vastdb_test_logo.png|center|200px]]
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Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.
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<h1>''VastDB''</h1>
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<h3>An atlas of alternative splicing profiles in vertebrate cell and tissue types</h3>
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</div>
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== Getting started ==
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* [//www.mediawiki.org/wiki/Special:MyLanguage/Manual:Configuration_settings Configuration settings list]
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* [//www.mediawiki.org/wiki/Special:MyLanguage/Manual:FAQ MediaWiki FAQ]
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<div class="landing-header"><h3>Search</h3></div>
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* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
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* [//www.mediawiki.org/wiki/Special:MyLanguage/Localisation#Translation_resources Localise MediaWiki for your language]
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* [//www.mediawiki.org/wiki/Special:MyLanguage/Manual:Combating_spam Learn how to combat spam on your wiki]
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<h4>By gene</h4>
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<div id="form-genes">
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{{#aform:action=Genes|method=get|data-source={{#getCouchDBinstance:}}}}
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{{#ainput:type=text|size=20|name=query|class=inputtext}}
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{{#aselect:width=50|name=genome|names=All species,Human (hg38),Human (hg19),Mouse (mm10),Mouse (mm9), Rat (rn6), Cow (bosTau6), Chicken (galGal4), Chicken (galGal3), Zebrafish (danRer10), Fruitfly (dm6), Arabidopsis (araTha10)|values=,hg38,hg19,mm10,mm9,rn6,bosTau6,galGal4,galGal3,danRer10,dm6,araTha10|selected=hg38}}
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{{#ainput:type=submit|value=Search}}
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{{#aformend:}}
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</div>
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<h4>By events</h4>
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<div id="form-events">
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{{#aform:action=Events|method=get|data-source={{#getCouchDBinstance:}}}}
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{{#ainput:type=text|size=20|name=query|class=inputtext}}
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{{#aselect:width=50|name=genome|names=All species,Human (hg38),Human (hg19),Mouse (mm10),Mouse (mm9), Rat (rn6), Cow (bosTau6), Chicken (galGal4), Chicken (galGal3), Zebrafish (danRer10), Fruitfly (dm6), Arabidopsis (araTha10)|values=,hg38,hg19,mm10,mm9,rn6,bosTau6,galGal4,galGal3,danRer10,dm6,araTha10|selected=hg38}}
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{{#ainput:type=submit|value=Search}}
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{{#aformend:}}
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</div>
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<h4>By coordinates</h4>
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<div id="form-coords">
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{{#aform:action=Coordinates|method=get|data-source={{#getCouchDBinstance:}}}}
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{{#ainput:type=text|size=20|name=coords|class=inputtext}}
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{{#aselect:name=genome|names=Human (hg38),Human (hg19),Mouse (mm10),Mouse (mm9), Rat (rn6), Cow (bosTau6), Chicken (galGal4), Chicken (galGal3), Zebrafish (danRer10), Fruitfly (dm6), Arabidopsis (araTha10)|values=hg38,hg19,mm10,mm9,rn6,bosTau6,galGal4,galGal3,danRer10,dm6,araTha10|selected=hg38}}
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{{#ainput:type=submit|value=Search}}
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{{#aformend:}}
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</div>
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</div>
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</div>
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</div>
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{{GenomeLanding}}
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<hr />
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<h4>News</h4>
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<div class="front_news container-fluid" >
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{{#ask:[[Category:News]][[Post Approval::true]]
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|?Post_Title
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|?Post_Publication_date=
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|template=Front_News
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|order=desc
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|limit=4
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|searchlabel= <br />All the news &hellip;
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}}
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</div>
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{{#ifingroup:sysop|<div id="button_news">{{#formlink:form=Post|link text=Write a new post|button|query string=}}</div>}}
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<hr />
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<h4>[https://bsky.app/profile/vastdb.bsky.social Bluesky]</h4>
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{{Widgets:Bluesky}}
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</div>
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</div>

Latest revision as of 12:13, 23 October 2025

Vastdb test logo.png

VastDB

An atlas of alternative splicing profiles in vertebrate cell and tissue types

Search


By gene

By events

By coordinates

Available genomes

  • Human (hg38)
  • Human (hg19)
  • Mouse (mm10)
  • Mouse (mm9)
  • Rat (rn6)
  • Cow (bosTau6)
  • Chicken (galGal4)
  • Chicken (galGal3)
  • Zebrafish (danRer10)
  • Fruitfly (dm6)

News

2025/07/28: Update of protein disorder rates
2021/12/23: New release of event annotations (v11)
2021/03/25: New release of event annotations (v10)
2020/12/21: Major VastDB release and update

All the news …

Bluesky

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