BtaEX6071808 @ bosTau6

Exon Skipping

Gene

ENSBTAG00000005240 | ZNF605

Description

zinc finger protein 605 [Source:HGNC Symbol;Acc:HGNC:28068]

Coordinates

chr17:44966897-44972563:-

Coord C1 exon

chr17:44972443-44972563

Coord A exon

chr17:44972113-44972205

Coord C2 exon

chr17:44966897-44968692

Length

93 bp

Sequences

Splice sites

3' ss Seq

TCTGTGTTTCCAATTGACAGGTT

3' ss Score

8.13

5' ss Seq

CAGGTGAGA

5' ss Score

9.22

Exon sequences

Seq C1 exon

ATATCGTTTGAAGATGTGGCTGTGAATTTCACATTGGAGGAGTGGCAGCTGCTTAATCCTACTCAGAAGACCTTGTACAGAGACGTGATGTTGGAGAACTATAGCAATCTAGTTTTATTGG

Seq A exon

GTTATCAAGTTATCAAACCTGAGATGATCTTCAAGCTGGAGCAAGAAAACCCATGGTTATTAGATGAAGAAATCCTAAGTCAAAACTTCTCAG

Seq C2 exon

AAAAAGTCTGGCTAGATAATAATCTCAAAATGTGGCATCAGGATAATCAAGACAAGCTTAAAAGTTTGGAGAGAGGCCATGAATATGACATCTTTGAGAGAATGTTTCATTTAGGCATTAACTTTGATCATTTAGGAATGAGATCCCATAAATGTGGCACAGGTGAAAAAAGTCTGAAGGATCCTTTTGATTTTCTTATTCCAAAAAGTAACTGTGAAAGAAAGAAACTTGATGAGCTTAATAGGAAATTATTATTTTGTATTAAACCTGCCAGAACTTATGGTGGAATAAAATACTCTGATGGCAATACATGTAGAAAAGTCAGCAGTAAAGAGCCAGGACTCATTATGAGCCATATACCACACACAGGAGTCTGTTTGTGCATGGAATGTGGCAAGGTTTTTAATAAAAAGTCACAGCTCATTATACATCAAAGAACTCATACAGGAGAGAAGCCCTATGGATGCCGGGACTGTGGGAAAGCTTTCTCCCAGAAGTCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000005240-'2-2,'2-1,3-2=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.017

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=100.0)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=4.0),PF0009621=zf-C2H2=WD(100=3.8),PF0009621=zf-C2H2=WD(100=3.8),PF0009621=zf-C2H2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3)

Main Inclusion Isoform:

ENSBTAP00000006896