MmuEX6019498 @ mm9

Exon Skipping

Gene

ENSMUSG00000023284 | Zfp605

Description

zinc finger protein 605 [Source:MGI Symbol;Acc:MGI:2444933]

Coordinates

chr5:110552779-110558813:+

Coord C1 exon

chr5:110552779-110552899

Coord A exon

chr5:110553372-110553464

Coord C2 exon

chr5:110556266-110558813

Length

93 bp

Sequences

Splice sites

3' ss Seq

TCTTTGCTTCTAATTTATAGGTA

3' ss Score

8.79

5' ss Seq

TAGGTAAGA

5' ss Score

9.14

Exon sequences

Seq C1 exon

ATATCATTTGAGGATGTGGCTGTAGACTTCTCCTGGGACCAGTGGCAGCTGCTTAGCCCTACTCAAAAGAGTTTATACAGAGATGTGATGTTGGAGAACTGCAGCAGCCTTGTCTTCTTGG

Seq A exon

GTAATCAAACCACCAAACCTGATGTAACTTTCAAGCTAGATCAGCAAGAGTCACGGATAATGGATGAAGAATGCCTAAGTCAAAACTTTTTAG

Seq C2 exon

AGATCTGGCTAGACAGTTATTCTGAACTATGGCTTCAAGATGAACAAGACAAGCCTAAAAGGATGGAGAGAGGCAATGGAGATAATGTTTTGGAGGAAGTATGTCACTCAAGCATGAACTCTGTTTATTTAGAAATGAGATTCCATATATGTGGTACATGTGGAAAGAATCTAAAAAGTCCTTTAAATTTTTTCATTCCAAAAGGTAACCGTGTAAGAAAAAAAAGTAAAGTCAGTAAGAAATTATTATTTTATCTAAAATTTGACAAACCCTACAGTAAGAGAAAATGCCATGATTGTAATAAGTACAGAAAAGCAAACAGTAATGAGTCACAGCTCGTTACAAAGCAAAGGACACATTCAGGAATCTTTTTATGTATGGAATGTGGTAGAATTTTTAACAAGAAATCACAGCTTATTGTACACCAGAGAAATCACACAGAAGAGAAGCCCTGTCAGTGCAATGGGTATGGGAAAACTTTTGCACAAAAGTCCCAGCTT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000023284-'6-9,'6-7,8-9=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.010 C2=0.189

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=100.0)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.0),PF0009621=zf-C2H2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF0009621=zf-C2H2=WD(100=3.7)

Main Inclusion Isoform:

ENSMUSP00000083891