RnoEX0101543 @ rn6

Exon Skipping

Gene

ENSRNOG00000037428 | Zfp605

Description

zinc finger protein 605 [Source:RGD Symbol;Acc:2318406]

Coordinates

chr12:52606560-52658275:-

Coord C1 exon

chr12:52658126-52658275

Coord A exon

chr12:52649154-52649246

Coord C2 exon

chr12:52606560-52609563

Length

93 bp

Sequences

Splice sites

3' ss Seq

TCTCTGCTTCTAATTTATAGGTA

3' ss Score

9.58

5' ss Seq

TAGGTAAGA

5' ss Score

9.14

Exon sequences

Seq C1 exon

CATCGCTCAGGAGTAAAACAGTTTCTGTGAGAGACAAAAAAAGGTCGATGTGTTCTTAGGTTCCAAAGATTTCTCCCTGGAATCAGGACAGAAAGACATCATGACATATTGAGTTTCTTAATATAGCAGAAGATGATGGAATCATCCAAG

Seq A exon

GTAATCAAACCATCAAACCTGATGTAGCTTTCAAGCTAGACCAAGAAGAGTCACGGATAATGGATGAAGAAATCCTAACTCAAAACTTTTTAG

Seq C2 exon

AAATCTGGCTAAACAGTAATTCTGAGCCATGGCCTCAAGATAAACAAGACAAGCTTAAAAGGATGGAAAGAGGCAATGGAGATAATGTTTTGGAGAAACTGTTTCAGCCAAGCATGAACTCTGTTTATTTAGAAATGAGATTCCATATATGTGGTACAAGTGAAAAGAATGTAAAAAATCCTTTAAATTTTTTTATTCTAAAAAGTAACTGTGGAAGAATAAAAAGTAAAGTGAGTAAGAAATTATTATTTTATCTAAAATTTGACAGATCCTACAGTAAAAGAAAATTCCATGATTGTAATAAGTATAGAAAAGCAAACAGTAATGAGTCACAGCTTGTTACAAACCAAATGACACATTCTGGGATCTATTTATGTATGGAATGTGGTAGGATTTTTAACAAGAAATCACAGCTTACTGTACACCAGAGAAATCATACAGGAGAGAAGCCCTATCAGTGCAATGGATGTGGGAAAACTTTTGCACAAAAGTCCCTGCTT

VastDB Features

Vast-tools module Information

Secondary ID

ENSRNOG00000037428-'0-7,'0-3,3-7

Average complexity

C2

Mappability confidence:

100%=67=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. ATG (>10 exons))

No structure available

Features

Disorder rate (Iupred):

C1=NA A=0.000 C2=0.131

Domain overlap (PFAM):

C1:

NA

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.7),PF0009621=zf-C2H2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.8),PF0009621=zf-C2H2=WD(100=3.4)

Main Inclusion Isoform:

ENSRNOP00000044439