HsaEX0074023 @ hg19

Exon Skipping

Gene

ENSG00000196458 | ZNF605

Description

zinc finger protein 605 [Source:HGNC Symbol;Acc:28068]

Coordinates

chr12:133498042-133509741:-

Coord C1 exon

chr12:133509621-133509741

Coord A exon

chr12:133509299-133509391

Coord C2 exon

chr12:133498042-133503748

Length

93 bp

Sequences

Splice sites

3' ss Seq

TCTGTGTTTCCAATCGACAGGTT

3' ss Score

8.17

5' ss Seq

CAGGTGAGG

5' ss Score

10.07

Exon sequences

Seq C1 exon

ATATCATTTGAGGATGTGGCTGTGGATTTCACGCTGGAGGAATGGCAGCTACTTAATCCTACTCAGAAGAACTTGTACAGAGATGTGATGTTGGAGAACTATAGCAATCTGGTTTTCTTGG

Seq A exon

GTTTTCAAATTCTCAAACCTGATGCAATGTTCAAACTGGAACAACAAGATCCATGGATAATAGGTCAAGAAATCCTAAATCAGAACTTTTCAG

Seq C2 exon

AAGTCTGGCTAGATAATCCCAAAATGTGGCTCCGAGATAATCAAGACAACCTTAAAAGTATGGAGAGAGGCCATAAATATGATGTTTTTGGAAAAATATTTAATTCAAGCATAAACATTGTTCATGTAGGACTGCGATCCCATAAATGTGGCACAGGAGAAAAAAGTTTGAAATGTCCTTTTGATTTGCTTATTCCAAAAAATAATTGTGAAAGAAAGAAAATTGATGAACTCAATAAGAAATTATTGTTCTGTATCAAACCTGGCAGAACCCATGGTGGGATAAAATACTGTGATTGCAGTACATGTAGAAAATCCAGCAACGAAGAGCCATGGCTCACTGCTAATCACATAACACACACAGGAGTCTATTTATGCATGGAATGTGGCAGATTTTTTAACAAGAAGTCACAACTTGTTATACACCAGAGAACTCATACAGGAGAGAAGCCCTATCAATGCAGTGAGTGTGGAAAAGCCTTTTCACAGAAGTCACTGCTC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196458_CASSETTE1

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.022

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=100.0)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.2),PF0009621=zf-C2H2=WD(100=3.9),PF0009621=zf-C2H2=WD(100=3.9)

Main Inclusion Isoform:

ENSP00000376135