BtaEX6083950 @ bosTau6

Exon Skipping

Gene

ENSBTAG00000038487 | ZNF613

Description

zinc finger protein 613 [Source:HGNC Symbol;Acc:HGNC:25827]

Coordinates

chr18:58134973-58141877:+

Coord C1 exon

chr18:58134973-58135099

Coord A exon

chr18:58135382-58135474

Coord C2 exon

chr18:58140187-58141877

Length

93 bp

Sequences

Splice sites

3' ss Seq

GTCTCATTTCCCATGAACAGGGT

3' ss Score

7.76

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

CGATCACTGACACTGGAGGATGTGGCCGTGGACTTCACGTGGGAGGAGTGGCAGCTCCTGGCTCCTCCTCAGAAGGCCCTGTACCGGGACGTGATGCTGGAGAACTATAGCAACCTGGTGTCTGTGG

Seq A exon

GGTATCAAGCCAGCAAGCCAGCTGCTCTCTCCAGATTGGAACGAGGAGAACTGTGGCCCGTGGAAGACAAAGTCCACAGTCGAATCTGTCCAG

Seq C2 exon

AAATGAGGAAAGATGACTGTCTTCTACAGGAGAACTTGCAAAATCAAAGCTGTCCAAAAAGAATGGAACGATGTCATGAACATAATGCACTTGGAAATGTTTATCAGAGCAAAAATCATTGTCCTTTATGGCAAAATCATGATGTACTTTACTTACATGGGAAAACACTGAAGTCAAACTTAAGTTCAATCAGCCAGAACAGAAACTATGAAGTAAAGAACCCCGTTAAGGCTAATGTAAATGGGAAATTCTTCCTCCATGCAAAGCATGAGGAATTTCACAGTGAAAGTAAGCTTCCTGAGTGTGGAATTCCCATGAACACAAATTCACAGATCATTACATGTCTAGGAACTCAACAGATAAATAAACCTCATGTTTGCACTGAATGTGGGAAAGCCTTCATCAAGAAGTCCCGCCTCATCGATCATCAGAGAGTTCACACAGGAGAAAAACCCCACAGATGCAGTGTATGTGGGAAAGCTTTCTCTAGAAAGTCTAGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000038487-'7-11,'7-7,8-11=AN

Average complexity

A_C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.192

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4)

Main Inclusion Isoform:

ENSBTAP00000047664