HsaEX6096506 @ hg19

Exon Skipping

Gene

ENSG00000176024 | ZNF613

Description

zinc finger protein 613 [Source:HGNC Symbol;Acc:25827]

Coordinates

chr19:52443462-52449005:+

Coord C1 exon

chr19:52443462-52443588

Coord A exon

chr19:52443870-52443962

Coord C2 exon

chr19:52447372-52449005

Length

93 bp

Sequences

Splice sites

3' ss Seq

GTATCATTTCCTATGAACAGGGT

3' ss Score

6.99

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GAATCACTGACCCTGGAGGATGTGGCTGTGGAGTTCACTTGGGAGGAGTGGCAGCTCCTCGGCCCTGCTCAGAAGGACCTGTACCGAGACGTGATGTTGGAGAACTATAGCAACCTCGTGTCAGTGG

Seq A exon

GGTATCAAGCCAGCAAACCAGATGCACTCTTCAAGTTGGAACAAGGAGAGCCATGGACAGTAGAAAATGAAATCCACAGCCAAATCTGTCCAG

Seq C2 exon

AAATCAAGAAAGTTGACAATCATCTACAGATGCACTCACAAAAGCAAAGATGTCTGAAGAGAGTGGAACAATGCCATAAACATAATGCATTTGGAAACATCATTCATCAGAGGAAAAGTGATTTTCCTTTAAGGCAAAATCATGATACATTTGACTTACATGGGAAAATACTGAAATCAAATTTAAGTTTAGTCAACCAGAACAAAAGGTATGAAATCAAGAATTCTGTGGGGGTTAATGGAGATGGGAAATCCTTCCTTCATGCCAAGCATGAACAATTTCATAATGAAATGAACTTCCCCGAAGGTGGAAATTCTGTGAATACAAATTCACAATTCATTAAGCATCAGCGAACTCAAAACATAGATAAACCCCATGTATGCACTGAGTGTGGGAAGGCTTTCCTCAAGAAGTCTCGCCTCATCTATCATCAGAGAGTTCACACTGGGGAGAAACCTCATGGATGCAGTATATGTGGGAAAGCCTTCTCCAGAAAGTCC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000176024-'5-6,'5-5,6-6=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.140

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=100.0)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6)

Main Inclusion Isoform:

ENSP00000293471