BtaINT0000674 @ bosTau6
Intron Retention
Description
NA
Coordinates
chr22:16415882-16437262:+
Coord C1 exon
chr22:16415882-16416304
Coord A exon
chr22:16416305-16437102
Coord C2 exon
chr22:16437103-16437262
Length
20798 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGC
5' ss Score
8.7
3' ss Seq
TTTTATTTCCTTGTCTCTAGGTT
3' ss Score
11.78
Exon sequences
Seq C1 exon
ATGGCTACCCAAGGCAGGGGAACTTCAGGCCTCTTCCCCAGGGGTGCTGTTCTCCAGAGACAGGAGGGCTGCCTGACCGTGAAACAGGAACCAGGGAGCCCGACCTGGGGGCATGGCTGCAGTCTCCAAAAGAATCACCCTCCTGTCTGTGAAATTTTCCGGCTCCACTTTAGGCAGTTATGTTATCATGAGATGTCTGGGCCACAGGAGGCACTGAGCCGGCTCCGGGAGCTGTGCCGCTGGTGGTTGATGCCAGAGGTGCACACCAAGGAACAGATCCTGGAGCTGCTGGTGCTGGAGCAATTCCTGAGCATCCTGCCTGGGGAACTCCGGACCTGGGTGCAGATGCATCACCCTGAGAGTGGTGAGGAAGCTGTGGCTGTGGTGGAGGACTTCCAGAGATACGTCAGTGGGCCAGGAGAG
Seq A exon
GTGAGCAACTGAATCTAAGTTGGCATCTGGAATTGGTTTTTTTGTAATTGAAATTTATTTATTTTAATTAGAGGCTAATTACTTTACAATATTGTATTGGTTTTGCCATACATCTGGAACTGTTTTCTACTGCTTGGGGTAGCCTAGAAATAGGCGTTCTCCATTCCATAGTCTCTAAACTGGTTTCCCTTTAGGATTCATGAGCCCAGTGCCCACCCCCACTTTTGTTTTTTACAAGGAGTTTTGTGCTCCCAGCCCTAAAAATGCAGGGCCCAGCCAAGTTCTGTGAATTGCTTTGTGAAATACTGTGTTGTAAACCTAGCTTAAGCCTGGAGCACCACACAGTGCTCCTGACACACAGAGGATCTGCACACTGGTTAGAATAGGGAAGCATGTCAGGGAGAAGCAGCCCTGAAGATGTGCTGATAGCATGATCCCTCACTTGAGAAGTTTCTCATTACTTCCTTGGACTTCTCAGAGTTAATGGGCTCTTTGCCTTTCTGGTTCCTTATGAGATGTGACAGGTCTGGGCTTCAGCATCATTTTTTTCCTTTGTAGCTTTCCAAACCCAACTGGCATCTTTCTGCTTCTTTAATTCTAATTTTGATTTTCCCTATTTTTAGAATTCTTTCAAGTTTTAATTCAAGGTAACACAAATGAAAGGAAAACTTGGAGAAGTCACCAGTGTCATAACAGTGTGAACGCTGACTCCTAGGATCATAGAGCTAACTAGCTCAGTGACCATGTGTATCAGTCAGAGTTCAGCCAGAGAAACAAAACCAGTAGGAAATTATATATTGGGTTGGCCAAAAAAGTTTGTTTGGTTTTTACCGTAAGATGTTATGGAAAAACCCAAATGAACTTTTTAGTCAACCCAGTGTATGTCTGTTGCTAGAAAGTGACATGTCACTATGGGACCTTGTGAGTCTAGTCAGGAGTTTGCAAGGCAGGTTGTCAGAAAGTTAGGCTAGAACTGTCACTCACAGGTTGAAGCAGCTGTCCACAGAAAGAATTCCTTCTTCATGGAACTTTCAGTTCTGATTTTAAGACCTTGCTACTGTTTAAATCAAGCCCATCCAGACTGTCTAAGATAACCTCCTTTACTTAAACTGATTATGAGTTTTTATCACTTCTATAAAGTATCATCACAGTAACACCTATATTAGAGCTAATTGACATCAAAAGACGATCACACTGTGGATAATCAGTTCTTCCTGATGAGTCTTCAGTTGCTTCTCTTGTAACTGAGCAGGATGGATTAGCGCATTTCCTCCTTTGTGCTTTACCAGGGAAAACCAGTGTGTGAAATTTCCCAGGTACCCAGTACAGCATTCTATTCAGTGCTTTTTCAAAAATGATTACGTGTCTGGGCCTAGGAAATCAGTTCCAATTGATTGGAGTCCTAGGGTTAGACCTTTTTCCAAAAGTCTAAACGCTTTGACAGTAACAAATCCATTGTTCGATCATTATTTCCTTGGGTATACAAGTAAGTGAAAATCACTCAGTTGTGTTCATCTCTTTGTGTCCCCATGGACTGTAGCCCACCAGGCTTCTCTGTCCTTGGAATTATCCAGGCAAGAATACTGAAATGGGTTTCCATTCTCTCCTCCAGAGGATATTCCCGACCCAGGGATCGAACTCAGGTCTCCTGCTTTGCAGGTGAATTCTTTACTGTCTGAGGAATAAGGAATAAGTTAACTATCAGCAGAGTCTAGAGGGCAACTTGGCCCAACCATAGTCAAGGACAAGTAGCTGTGGAAATGTTTAGAGTGCCATTTAGTGAGGAGTGTAGAAAGAAGATTTCCCTATCTTCTGCCTTTTGCTTAAGCATAAGAGAATGTCCCCTCCATTAAAACTGTCACTTGGGACTTCCCTGGTCATCTAGAGGTTTAGATGCTGTGCTTCCAGTGCAGGGGGCCCAGGTTCAACCCTTGGACAGGGAAATAGATCCCACATGCCGTAACTAAGAATTTGCTTGTCATGACTAAAAGATGCCTCATGCAGCCAGATAAATAATAATTTTTTAATTAAAAAAAGTACTGTCTTTTATCCAGGGAACCTCAGAAGAAAGGTGACTGAGTCACAAACCCAAGAGAATGACTAACAGTTGACAGGGCCACTGAACACTCATCGGGCTCTAACCTAGAAGTGAGATATTTGGACTCCATTTCTTACTCTGCGGCTGTTGTCAGTTTAAGTTTTTCAACATGAGAACAGGGCTGTCTCACCTAGCCTGAATTCAGAAAGTGTTTTTTTGACTAAATGGAAAAAAAAAACCACAGAGGCTTTTTCATGAACGTTTGCCAGGAGGAGATGACAGGATGTCATTTTGATCAGCAGAAGTGAGTGAGCATGGGCATGTGTGTACACTGGGGCCAGAGAGGGTTGTAGGGACATCCCTGCTGGGTTGCAGAATCACGCAGTTTACAAAATGCTTTATATCTGTTTTAATTTGTGTTCCTACCAAGCTTCCAAATAGTAGCCCAAATGGTGATCATCTCCATTTCACAAGCGATGCAAGTACCGAGAGGTTAATTGGCTTATCTAAGATGACAGAGCTAGTGTGTGTAAGATGATAGAGCTAGTGTGTGTGTTTGTATTAATTGCTCAGTCGTGTCTGACTCTTTAAACATTCCATTGGTCCATGTGTATGAGACCAGGATTTTCCAGTTCTTATATTCTAAGCCACTACCTTCCCCCTAATGTGTTGCTGTGGAATGCTGTCGGGATGAAAATTGGAATGGGGTTTTCATGGCCTGCAAGAAAAGGACTCCTGTGAGTCCTAGTGAATGAATAGGAACTTTATTAGGATTTAATTATCACTGAGTTACAAGGTTGTGTTATCACAATGCAGTTAAGTTCTGTTTTCTGCCAGTACCCACAGCTGACTAGACAGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATGTGCTGTCTAGGTTGGTCATAACTTTCCTTCCAAGGAGCAAGTGTCTTTTAATTCATGGTTGCAGTCACCATCTGCAGTGATTTGGAGCCCCCCAAAATAAGGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAAAGGAGTACATCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTCTTTTTTTTTTTTTCTTATTTAACTTCTATGCAGAGCACATCATGTGAAATGCTAGGCCAGATGAAGTACAAGTTGAAATCAAGACTGCCAGGAGAAATATCAATAACCTCAGATACACAGATGACACCACCCTTATGGCAGAAAGCAAGAACTAAAGAGCCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAACTGGCTTAAAACTCAACATTCAAAAACAAAGTTCATGGAATCCAGTCCCATCACTTCATGGCAAATAGATGGGGAAATAATGGAAACAGTGAGAGACTTTATCTTCTTGGGCTCCAGAATCACTACATATGGTGACTGCAGCCATGAAATTAAAAGACACTTGCTCCTTGGAAGAAAAGCTATGGCCAACCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCGTCTAGTCAACACTACGGCTTTTCCAGTAGTCGTGTATGGATGTGAGAGTTGGACTATAAAGAAAGTTGAGCGCCGAATCATTGATGTTGGAGAAGCCTCTTGAGAGTCCTTTAGACTGCAAGGAGATCCAATCAGTACATCCTAAAGGAGATCAGTTCTGGGTGTTCATCGATAGGACTGATGTTGAAGCTGAAATTCCAATACTTGGCCACCTGATGTGAAGAGCTGACTCATTTGAAAAGACCTTGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGAATGGCATCACCGACTTGATAGACATGAGTTTGATCAAGCTCTGGGAGTTGGTGATGGATAGAGAAGCCTGGTATGCTGCAGTCCATGGGGTCGCAAAGAGTCAGACATGACTGAGCTACTGAATTGAACTGATAATCCCCTGTGCTGGCTTCCCAGATGGTAAAGAATCCGTCTGCTAATGCAGGAGACTCAGGAGACACAGGTTTGATACCTGGATCAGGAAGATCCCCTAGAGGAGAAAATGGCCACCCACTTCAGTATTCTGTGAAGGACAGGGAAGCCTGGCATGCTGCAGTCCTTGGGGTCACAATGAGTTAGACATGACTGATCAACTGAACAACAACCAGTATTCTTGCCTGGAAAATCCCATGGAAAGGTGATCCTGGCAGGCTACATTCAATGGGGTCGCCAAGAGTTGGACAGAGCTGAGTGACTGCAAATGCATGCATAATCCCCTGAGTAGTTTCTCAATTAAGTGCAAAACTGTGGGTGGGGCCTAGGTTTTCCTATTTCTTTTTAACTACCCAGATGGTCCAAAGTGTAGCTAGGGTTGACAACCTGAGGATGAAGGGTCCTTCCTTTTACACAGATTCCCTGCAGCGTTGCTGAAGGGTTTTATTCATTTGCTTGTTCTCAAATTTATAACACATTAGCTTTTGACTTTGAAAAAGGAGGAAAGTTTTACCTCCCCTGTTTTTTTACCTCTTATTTTGTTTGTTTGATTTTGGCCTTGCCACAGGGTTTTTGGAGCTCTTAGTTCTCTGACCAGGGACAGAACACAGGCCCCAGCAGTGGAAGCGTGGGGTCCTAACCACTGGACCACCAGGGAATTTCCTTTACCTCCTATTTGGAAATGTGAAGAGATAAGTCTTGGTATATTGAGGCGGGGGTGAGAGTTGTGGGGGGGCTCTGGACTGTGGCCAAAGAAAGATCAGAGTGTACAACTGAGAATTAGCTGTGGCCAAGTGACAGAAAGAAAACTGTCCTGATGGGTGAAGGAAAGTTACCTGGCTCAAAATAGCCTGGAGTTAAAACCCTCCTCCAGGTCCTCCCCACCATTCTATGCAAAACAAAGAACTGTCTCACCCGGAAAAAAAAAATGGACATTAAGGCTGATTACGCCCAGCTCCCAGCGGGTCCAGCCTCTGGCTGATCTCCAAAATTCCTTGCCCCAGCCGTTAAAGAGATAACTACTCCAAACCACCTTGGAGGACAGGCCCCCTTAATACAGTAGCTTTCCACATATATGCCTATATATACTTACTCTTTTCTTGGGTTAGTGCAGCAGCTCACTAATCTCCCTGCTGCCCCTTCTCGCCTCATTAAAGGTGATCTGTTCCTGTAAAATGCTGGTCTCGTTCTTTTTTCGAACCTCGTCTTCTCTAACTCCCTTACCCTACAATGGGATTTTCCACTCCTGGTCACAAACTCAGCCCTGCTTCGTGGGGGAAAACAAGGAATCAAAAAATGTGTTCTCTTTTACAAAGATGATGTTTGAATTTTTAAAGTACTTTCTAACATAGCAAAGAAATACTGATACTTTAAGTAGTACTAAAAAGATTTTAAAGTGGAATTCAGCCTCTCCTCCCTTGCCAGGAACTCACACACATCCTTCCTCCATCCCTAACATTCTAAAAGCCCTCCTCTGTCTTCCTCCAAAAAGATGATGGTATGCCTTTGGATCCAGGGATAAAGACAGTATCAGGAAGGCTCTCCTGGAGAGCTGAATCTCTATTGGTAATGGGTAGGGGATCCATCTTTGGGTCAGGAAATAGGAATGGGAAAGAGAGACTATAAAATCTGTTTTTATTTATTGCTGTATCCCAAGTGTTGTTGGATGGCAGGGATACTGAATGGTAACTGTCAAGGGGTGTGGTGATGGGCCAGCACCTGGTAAAAGGATTTACTGAGTCAGAAGTGAGGGTACCAAGTGAGATTTACTGAGTACACTGCAAGGGAGCAGCAAGAGAGACCCAGAAGTGTCTGCCTCCGGTAGGGGAGAGAAACTGGGCTTCTTTTATGGTCCATTCTGGTCACCCTTGGGTTAATGTTCCACCCGTATCGTGGTTAGGGCTGGGTGTGTCATTGCTCAATCTTCCTGGACCACTAACTGCTTGTAACTGCTGGTGATTTTTCCTTGGGGGAGGGTATGACTGTCTTGAAATGACTTCCCAAGCCTAAGATGACTGTTCTATTGTTAAGTTCCACAATAACCTCTGGACTGAGAAGGAAGTTTGAGACCCAAAAAATGAAGCAGGCAACTCTATAGAGAGCAATTATGAAATATGTTGTGGGTAATTTGCCTACAGGAAGGATCAGGCAGGCGACCACCCAGAGGCATTAGCAGCTATACTCAGTGTTGCTGAAAGAGGTAAAGATTCACACTGAATTGGTTGAACCCAGGATGCTTTGTCCCAAAATGTGAAAACTAAGAAAAGATGCAAACACAAACCATACCATCAACTGGAACATCTCTGACCCATGCATTGCACTTCACTAAGGGTGTGGTGAGAGCGCTCTCTGCAGGCTGTTCAGTCCTTTCCGGAAAGGCAGCTGCTTCACGGAGTTGGCCCACCCCTGGAATCCCACTGAGGCTTGATATGGGATGTAATATTAATGATAGCACTTTGTTAATCCTGTCCTATTTTATTAATAAGATAAGTGAGTACTCATGTGAGGATGGGCAACTTGGGTCTTAAGGTCACATACAGGGCTTTGGTAGTCAGGAGCTCTGTTTTCATTAGGGCCAAAAGCCAACTAGGAGTTGCCATTTGAAGGGGGTGTTTCTGGCAGCTGCCTTTAGTATTCACATGTCCCAAACTCAAGAGGCCTATGTATCCAAATAGCAGTCTCTTGTTCCTGTAGGCTCCAATTATCACGTAAGTCTCTACGATACATAGCTCCAGAGCTGGCAAGCATCATTGGTCCCAATGACAGGGCCCATGCCAACGCATCTAGCACAACCTCTAGAGTCTGCTGCTTTTAGGAGTCCCATTCATAGATGGCTGTCTTGCAGGTAACCTTGCCATAAAGGACATTTGGTACCTGTTGCTTCCGATAGCCAAACAGGCCTAACAGTTAGCTTCTTTCTTGTTGGTGGAAGCTGCCAAGGACAGCAGCTTTTGGTTGACTTTATCAGGGATACTCCTCTGATGACTCGCCCAGGTGGCTCATAGAAGCTGCACTTTTGAGCAGGTCTTGCATCTCATCAGGGTTGTCAACCCTTCTTGCGTGTCATAAAATCCGTGACCTCATGTAGAGACTGGTCAAGGCCAGCTTGTTGGTCAGGTCAGTAATGAGGATGTCAACACAGTGGATGAAAAGTAATTCTTTTATCTTTTTTTTTTTTTTGAAAAGTAATTCTTGAGAGGGACTTCCCTGCTGGTCCAGTGATTGGGAGTCCTCCTTACAATGCAGGGGACGCAAGTTCAAGCCCTGGTCGGAGAACTAGGAACCCACATGCTGAGGAGCAACTAAGCTCACACACTGCATCTACTAAGCCTACACGACAGAACTATTGAGCTCTCAAAATAATTTTTTAAAACAAGTAATTCTGAGGATAACTGGGTTGTTGCAGATCGAGGCTTACCACTGGTGGCATATTGCAGGGGAATGGAGGTATTGCTAGGACTGAATTGTGTCCCCCCTAAATTAACAGGCTGAAGCCCTAACCTCCAGTATGACTGCATCTGAAGTTGTAAAATGAGAAATGAAGACAGAGTGTGAAAGTGTGCTTCTTCAAGACAAAGGAAGAATAACCCTTAGAATGATTGAGATCATCAGGGTTACCACTTCAGTTTCAGACAGACCAGACAACTCCCACAGAATCCACGAGGGCAGAGCCACTTAGAGGTTTGAGAGCAAGACTCCCCTAGAGCTCTGATAAGCCGGTGGATCCAGAAGGCGGGACTATCACCCCTAATCCTGGAGAGCAGAGAACTGAGCCAGAATAACTAAGTTTTGAACAAGCACACTTTTTCCCTTCAGATTTCTCCTTTTTGGAATTGAAATGTGAGATAATACACATTGGTCTCTGCCCCTAGTTCCTAGCACAGAGTCCCTTAAGTCCTTGTAATTTTCTAAGTGGTAAGAGCACCAGGAGCACCTTTTGTTCTAATATTTGGGTCTTTGATCCTGGTTCCTGACATAGGGTTCCTGAAATCTTTGTAATTTACTAAGTGATAGGAAAATTGCTTTCTTTATTTATTTTTGGTCACACTGTGTGGCTTGTGGGATCTTAAGTTCCCCAACCAAGGATTGAACCTGACCCATGCCTCCTGCATTGGGAGCACATAGTCTTAACCACTGGACCACCAAGGAAGTCTCATCTTTCATTCTAATAAAGTAACTCTGTGTAGGCTCCTGGATGAGGGCTGGTCACAGGAAAGAAAAAACCATGGTTAAAGCTTGAGATTTTCAGCTCCTTCTGCCCCCACCCTGTTCTCTTGATAATGGAGATGCCTGCATGATGAAGCCTGCATAAAAACCCAATAATACCAGGTTCAGAGAGCTCCTCAGAGGGTGACACATCCTGACTCCATAGAGACAGCAGCTCTTGTGCTGGGACCCTCTCAGATCTTACTCTATGTATCCATCCTCATACGCTTTTATAAGAAAAAACAAAAATCAGAAAATATAAGTAAACTGTTTTCCTGAGTTCTGTGAACCACTCTAGCAAATTAAACCCGAGGTGGTTGTTGGAACCTCTGATCTACGCTGGTTAGTCAATAGCGCAGGTGATAACCTGGGCTTGGAACTAGTATCTAAAGTTGGTGTGTGTGTGTGTAAATTTTGTGAGACCAATCCCTTAAACTGTGCAGTTTGACACTGTCTCCAGAGTGTCAGAACTGGGCTAAATTGTGGGACACCCAGCTGGTGTTCCAGAGAATTAGTGTGGGGAAAATTACCCACATTTGGTGACCCCAAATGTCAGAAGGTTAATGTTCTGTATGAATAGTAACAAAGACACAGGAGAGAAACACAGGAGGGAAGGACTGTGGGTTTTATTGACATCAAATGTCTACCCTATAAACACTCAGAACTTTATTTGGGAAGCATATAACCTGTCTGGTTTTACAGGTTCACAGCTGAAGAATTGCCTCAGCTTGAATTTGACCCCTATCTGATTTAGATAATGTTTAGATGAGACTTGTGGACTTCAGACTTTAAAGCTAATGCTGAATTAAGACTTTGGGGCTGCTAGGATGGAATTAATTTATTTTGCAAATGAAAAGGACCTGAATTTCGGGAAGCCAGAGGCAGAATGTATGGACTGAATGTCTGTGTTTTTGAAATTCATGTGTTAAAGCCCTAATCACCATAATCCACCTAAGGGTGATCCTATGTAGAGTTGGGCTTTGAGGAAGTAACTCAAAATAGGTTAGTTTATGTGGGTAGGGCACTCATGATGGAGTTAATGAAGTTCTTATTAGAAGAGGAAAGGACTTCGCTGTCCAGTAGCTAAGACTATATGATCCCAATGCAGAGGGCCCGGGTTCCATACTGGGTCAGGGAGCTATATCCCACATGCTGCAACTAAAGATCCCGCACGCTACAACAAGGATCAAAGATCCCACATGCCGCAACTAAGACCCGAGAAAGCAAATAAATAAAAACAAACACTGAAAGAAAAAAAGAAGAGGAAGAGACAGCTGTTCTCTTTCTCTGCAATATGAGGATATAGCAAGGAAGCAGCTGGCTGCAGCCAGGACTCAAAGGATTCGTACCAGAACCTAACCATGCTGGCAACTTGATCTTGGATTTCCCAGCCTCTGAGGAATAAATGTTTGGTAAGCCACCACTCTACGGCATTTTGTTACAGCAATTCCAACTAAGACAGCTGCTCAAGGTATGTCCCTCCCAATCCCCTTCCTCCCAAAAAGGGATCAGGCCCAGTTATCTGTACTCTGCAAAGAATATCTCCCTTACTATGCAAACTCTTCCAGGTAACAAAAGAGAAACAAAACTCCCAAATTAATTTTGCTAAGCAAACTGAATCTAGTTCTGTACTTCAAAAATAAGATACAATCACCATGAAAAAACAGATTTTATTCCAGGAACACAAGAAAATTTCAATTATTTGGAAACCTGCCAACAAAATTGATACAAAAAGAGTAAAGCATAAGACCCATGAAATTTTACCAACAGATTTTTAAAGTTTTTGATAGAACTTAGCATCCGTTCATAATAAAAACTTTAGTATGATAACTTCCTACAGTATGTGTACACTACATGTCAAGTACTGTTTCAAGTTCCTTATACTTATAAATGAATTTTATCCTCAAGGCCCTATGAGGTAGCTCCATTTTACACATGAAAGACAAAAGGAAGGGCACTCATGATGGAGTGGTGGCCCAGTGGCTTGTCCAAGATTACACACCTAAGGAAAGTGATGGAGGCAGGATTTGAACCTAGGTTTCCAGGCACAAAATCTGTGCTCTTTACCACTATAACATATTGCTGCTTCTAAAAACAGGAATAGAAGAAAACTTCCTTAACACAGTACTTATCAGAAACAATGAGGGTGAACCACAGGTACAACTGTGACATGCTTAAAAACCTTTCTGAAAATTAGAAACAAGACATGGAATATGCCTGTTATTCACTGTTCAACTTTTTTTTTAATGCTGATGTTTGACATAAGTGGCATACAGATTGGAAATTAAGAGAACACTAATCGTTACTGTTTTATTGTATATCTAGAAAAGCTAGGAAATGAAACTAAAAAATTCTTCAGACCAAAATTAATTAAACGAGGTAACTGGATCCAGGTAAAATTTTTTAAAAATCAGTTAACTTTTAAAATACTAGCAATAGCCAATAGAAATTGAGGTGTAGCGTTCAAATGTAGCTCCTTTTTCTCCAACCAAGAGCCTGAGTGCTTTCCTAGGAAGCGAGGACATTCATTTCTGGTGCTGCTGGTGGTCAGCTCACAGAGTTATGAGCAGTGCTGGATCTGTCCCCCAGAGACTCAGTGTGGTAGGGTATGAGCAGAACCAGAAGATAATAAACTAAAATATTCAACAGACAAGAGTTTCTACATAAGATATGACCAGCCACATTTAAATTAGAGTTGAGGGCTGGACCTGTGTGTTCATATGGGGTCTCCCCTGGAACCTGGGAGTTTCCAAAGTAAAACACTTAAAAAAAAATAAAGTCCTGGATCTTAAAGGTTCAAGGGACACAGACTGGCAAACCGGAAGAAAAGCTTTTCTTCCTAGAGAACACAAGTGGTGAGGGTCTAGATTAAACCAAGCTTTAAAAGGGCCACACTCAAGAGGTAGGAAGAATGACTCAGTCTTAGAGGATGACTTTATATAAACGGTAAAATGGAGGAGGTCCAGTGGTTCAAGCAGTCCAGGACTTCGTGCCTTCATTTCTGAGGGCACAGGTTCTATCCCTGGTTGGGGAACCAAGATCCTGCAAGCTGCCTCATGCAGCCAAAAAAAGAAGAAGGAAACCTATAAGCACATGAAACATGTAGTCCTTATTTCCCCAAGAGGAGGAGGAAGATTCCACTGTTACTCCAACTCTCCCACCTTTGTGACCAGCAGCGAGCATTTGGAGATGGTCCATATTTTTTTTTCTAATTTTTTTTCTTTATGTTAGCCATGCTGTGTGGCATGTGGAATCGTCATTCCCAAACCAGGAATCAAAACTCATGCCCCCCATTTTGGGAGCTCAGAGCCTTAACTACTGGACCACGAGGAAAGTCCTGGGATGGTACACATGGAACAGGTGGTTCCAAGTAGAGATCAGGATGAACATACTTATACAGAAACCTTAACCTAAAGTTTCTTGCTGTCTTAGAGAATCGTGTCTTAACAAACAGACCGAGCCAGACCTGAGTGCTTCTCTCTAGTGTGAGTTCGCTGGTGGTGATTGAAAGTAGAACGCTGACTAAAGGCTTTGCCACACTCAATACATTCATAGGGTTTCTCTCCAGTATGAACTCTTTGGTGCACGGTGAGTTGTGAGCTATCACGAAAGGCTTTCTCACAATCTTTACATTTATAAGGCTTCTCCCCAGTATGGGTTCTCTGATGTACCATAAGGCTAGAATTATGAGTGAAGACCTTTCCACATTTATTACATTCATAAGGTTTCTCACCAGTGTGAATTCGCTGATGAATAATGAGGTACGAGTTTTGATTGAAGGATTTTCCACAATCATTGCATTTATAGGGCTTTTCACCAGTGTGAAGTCGCTGATGTCGAGTGAGACATTTACTCAGACTGAATGCCTTACCACACTCATTACATTCAAAAGGTTTTTCTCCAGTATGAATTCGCTCATGGTCAGCAAGTTGAGAGATCTGATTGAAGGCTTTCACACATTTGCTACACTTGTATGGTTTTTTCCCGGTGTGGAGACTCTGATGTCGAGTAAGACATTTACTCCGACTGAAGGCCTTGCCACATTCATTACACTCATAAGGCTTCTCCCCAGTGTGGATTCTCTGATGGTCAATAAGATTTCTGTTAGAACAGAAAGCTTTCCCACACTCCTCACACTTGTAAGGTTTCTTACCAGTGTGAAGTACCTGATGGCGGATAAGGCTTTTACTCCGACTAAAGAGTGCTCCACACTCATTGCATCCATATGGTTTCTCCCCAGTATGAGTTCTCTGGTGGTCAAAGAGTTTGGAACTTTCGTTGAAAGCTTTTCCGCATTCATTACATTTATATGGTTTCTCCCCAGTATGAAGTCTCTGGTGTTGAATGAGATGGGAGCTGTGGCGATAGGTCTTTCCACAATCACTGCATTCATAAGGTTTTTCCCCTGTATGGATTCTGAGGTGGACAACGAGCTGAGAAGTCTGCCTGAAGGTCTTGCCACACTCAGTACACTCATATGGTTTCTCTCCAGTGTGGATTCTCTGATGTCCAATGAGGTGTGAACTCCAATTAAAAACTTTGCCACATTCATCACATCGATATAATTTCTGTCCCTTCAGAACTCCCTGATGTTTTGAGAGAGTGGAGGACAGATCTGGATGTCCCCCAAGTTCCTTATACTCATCACATCGATCCTTTGTAGATTTCTTTTTATCCTCCTGTGTTATTTCTAAGAAATCACTTTCCCGTCTGGTTCCTTCTTCATCTGAGGGTTGAACTTTTAGTTTCTCTAAAGCTTCTTCACAGGAAGCCCCAGCTTCTGGTCCTCTAAGAATCAGTCCACAGAGTATGCCTGAGGTCCTGTCAGCTGACTTTGACTCTTCAGAAATGTCCTGCTTCGGAGACAACTGTGAACTTGCCATCCTGTTTTCACCTGCTGCCAAAAGACAGAAGAAAACAACTTTCACTCACTTCTTGTCCTATTGAGGAAATGAACTGTCAGGAGTCTATGTAGCTTAAAAAAAAATCCACATTGAGGATAAGGAATAAGGAGACACATTGAGAACAGGAGGGAAAAAGCAGAGCTATCAGGACAGAGGGATGTGGAGCCAGCACAGCCAGGTGAGCAGGCCAATTGAAAGGCAAGAGACCAAACTGTAAAGCACAGTGTGATCTCCCAGAAGTCACTTAGATGTGGTGTCTCCTTAGTAAAATGATGAACTCTCGGATTCACTCCAACCATGACACTGTACAGCTCTACAGTTCACAGCAAAGATGTCAAGGAGAGTGATGGCAAATACTTTAAACTAAATATGAGAAACATGTAGGCAAACATGAGAGTTGAAGGGAAATGTGTATTACGAGGGCGTGATCAGGAAAAAGTGCACAAAAAGGAGTGATTCTGGTATGAAAGAATAGTAATGATATTTGGAGAAGCTATGGGTTCAAAAAGGCTGGGAAAATGTACTGAAAGAGAGAGTAGAGCTCTAAAATTGGCAACATCCTAGTCTCTGGAGCATTGGACTAGGAGGTGCCAGTAGGCACTTCTATGAAAATTAACAAAGGCAATAATTTGAAATACAAATCCAAGTACATGTTTTGTAGCTTGATAACCTGTAAACATAATAAGACTGAAGAGCTGAGTATTTGCTTTTAAATTCTGGAATTAAATATAAAAGCTGGGAAAGGCAGAGCATCCATGGTCATAGGTAAACACAAAAATATTGGTTCCTTTCAATCACATCTTAACCAGACCACAAGCTATCATACCATCTCAGCATATGGAAAATGAAAGGTATCTGGCCCTTTAATTCTAAGCCCACCCTCTCCAGAGTAGGCTACTGTCCTAGACCGGTCAACCCCAGAAACTCCTCTGACAACAGCCCCTTTCAGGAAGCAGCCCTGCCCTAGTCTTTCTGAAGGGGAAGCTGAGAAAACGATGTTTTGTGCAAAGCAACCTGGATCATCCCAGGATGGACAAGGACCAGGACTAGGTGACTGGATCACGGCCAAGCACCAGACCCAAGTGCGGCTTATAGAGTAGTCATCAGCTCTGGGTGACCTGGAACAAAGTTCTGCCCAAAGAAATATGATACTTAATGGCTGAACCACCAATGGAATCCCTTTCTACATAAATTCTGAACTGAAAGTAGGACAAAATGAAGGAAATTACAAGTAGTAGCTCAAGTTGAAATGATGCATGGAGAGAAGAAATCCATCAGGAACCACAGCAAACAGAACATATGAGGAAATAGGAAGTCTAATTAAGAAAGAGCTTGAAGGGGGACAAAAGATTCAGAGTAAAGAGAATGGCCATCAGTGGGAATAGAAAAACAGATACACAGGACACAGCTGTCTTACAACACTGCCGTAAAAATCCTTTCACTTCTGCTGCTGGGTTGGAAAGATCCCTTGGCGCAGGGAAAAGCTACCCACTCCAGTATTCTGGCCTACAGAATTCCATGGACTATATAGTCCATGGGGTCACAAAGAGTTGGACACGATTGAGTGACTTTCACTGTCACTTTTCTGCTGCTGAGGCTCACAAAGCTTTGTTTCCCAAAGCCTGGTCTAGCTGGTGAGTCTGTTCAGGGTTTCCAATCCTTCAATCTTACTCTAAGTAACTTAGCTCATGACTTATAGTAACTGAATGGCTCTCTATTCCTTCCAACTACAAACTCTTAACTAAACCAGCTCACTTCAATTAATAAGGAAGTACAGAGAACCGTCTGAGCCACCAGGGAAGTCACAGAGAATGTTAATGACTATCAAAGTGAGTGATGATGTAGAGAGATTTATTATACTATTCTCTCCATTCTCTTTATATTTTCATAATTAAAAGAATAAGAACATAGCAAAGAAAATGTAAAGAAGGCAGACTCTAAGTTACTAGGGAGCAGAGTCATTACCCAATGGGGCCAGGCTGCAGCAATTTTCCAGCATGATGTTCCAGTACAGGGCTCTCTGGCTGAGGGCTGTACCTTTCCAGTTCTTTAGAGTATAGTTCACAGACAGAAACTCCAACTCTGCAGCCTCCTGGAATGACAAGCTTCTACTGCTCAGGGACATTTGCAGCTCAGGGACTTTCACAGCCTAAGGGGCAGAGTCAACAAGGGTACCAAGACAGGGTTGAGACCCTGGGGCCAAAGGGGTGGGGGTACAGAAAGAAGCTGGGAGGACACATTAATAAAAGGACACGTTCAGGGTAAGATAACAGTCCATGAACTCAGTGGATGGGACCAAGTCCAGGGGAGGCAGTTAGGAAGAGAAGTCACAGGAGCAGCCTCTGAATGGGCCAGAGCCCTGGAGATGAGGTCCTGCCATTCCCGGGCCACAGACTTGGAACCCAGGAAGCTCACCTGGGGCCTGACCATCTGGAAAATTCACTGGAAATTCAAGGATTCCAACAAAATGAAAAAAAAAAAAAAAAAAAAAACCTTGAAAAATAAAATTAAGTTGAAGAACTCACACTTCACAATTTCAAAACTTATTTGACAAAACAGCACTGATCAGGACTGTGTAATACACACACAGATCAGTGAAATAGGTAAGAGTCCAGAAGTAAACATCTACAGTTAACTTTTTTTTTTTTTTCCAGCTGCACTGCGTAGCATGTGGAATCTTAGTTCCCCAACAGGGATTGAACCTGTGTCCTCTGCATTGGAAGGACAGAGTCTTAACCACTAGACCACTAGGGAAGTCTCCTAAGGTCAACTTACTTTTTAAATATATTTTAGATTTATGTATGTATTTTATTTGGCTGCAGTGGGTCTTAGTTGCAGTGTGTAGGACCCAGTTCCCTGACTAGGGATCAAACCCGGGCCCCCTGTACTGGGGGCATGGAGTCCCAGACATTGGACCACCAGCAAAATGCCCATCAACTTATTTTTTATGGAAGTCCCAAGAGCACTCAAAGGGGAAAGAAGACACTTTTCAACAAACGGTGCTGGAACAACTGGATATACACATACAAAAAAATGAGGTTACACCTCTACCTCAGTCCATATATAAAAATAATATGGACAGTAGGCTTTGGCACCTGTTGCAAATTAGCCCCACTACTCTGTGTAACAAATCATACATGACAGCTAGCTTCCCCTGAGAACATGGAACTCTTCAACTCCCACCACTTTAAAGCAAATTTTTAAAAAAATCACTATCCTCATCCATGATTAAAACAGAGACCATCATCTCCTACATTTGCTACAAACCAATACCTAGTCAATGTCTCCTGGACTCAGTGAGTGCTGGGAGGACTGATAAGAGATGACTGTTAACTGAAATGGGAAGAAAGCTCACACCGGAATGCTTGTCACCACCCAGATTAAAGAAAACGCAGTATTGTTACAGGGTCATGGAGAGTCAAGTGAAGAACTACTTTAGGATTACGTATGATGAGGAAGTTGAAGTTTTGGCAGAGAAATGAAGCTTTGCTGTGAAAGAAAAAGGCAGGGCCTTTGCCAGACAAATTTGCACAACAGACTGGGGAAGAGAAAGATGCTCAGGTGAAGAGAAATACAGGAGTAAGACTGAAGACAATGAACTGGAGACCAGAGAAAAGTATTATGAAGAAACGTACCAGCAGGAAATATAGAGCACTGACATATCTGAGTGAAATAAGCACCAAACGTAAGCCTCCAAGTCGACCTGTTGTGAAGCAGCTGCTACAGAAATGTCCAAGGAGGTCAATGAAGTATTTGTAAAGAGATGATGTGAAGGACAGCAGAAAAATGACGGCAACTGCCCGTGAATATGGCAAAAGAATACAGTTCTTTGAGCCCAGTCTCTGCAACCATGAACGTGGATAAAAGCTAATGACCACTTCTGCCATGAGAGGACAAAGCAAGAAGGCCATCTATGAACCAGGAAGCAGGTTCTCACTGGATACCTAATCTGCCAGCACCTTGAGAGTGGACTTTCCAGTCTCTAGAACTATGAGAAATAAATTTCCGTTGTTCATAAGGCATCCAGTCTATGGCATTCTGTTACAGCAGCCCAACCAGATTAAGACTTTGAGAAAGAGCTTTCTTTAAATTTCTATTTATCAAAGTCCCAGAGTTAAGCCTGGTCTGGCTAACACATCTCTTTGTGAACCAATCACTGTGACGAGGTGATAAAATGCTCTGATGGGTCACATCTGAGTCACTATCTGCCACTGGAATATCCTGGAAGGGGAACTGAATGCATCAAAACCTCAGGAGCACATGGACTGAGAGTGGGGACAGTAGTTCTCCCCAAGTTAAGGAGTTATAATCAAAAGAAAGGGGCCTGTGTACCAGACAGACAGAAAAAAAACAGACATTGCTACCGAACCAACTTGGGTCCACTTGCTCTGATGCAGTAAAGCCAATGTACTGAAGCAGCATTAAAAAAAAAAAAAAAAGCTAATGACCTCCTGGGCCTTTCAAAGTCTGAATGAAAGCCTCACAGCACAGTAAATAAAGATGGAGGCCAGTGAGCTGAAACTGCCCAATTAAATTCAGGTATTCTAATGCCTCTGGGTTCCTCCCAGATCCCAATCAGTTTTTGAGGACAGAAGAAAACATCAACTTGTTAAGACGACACCATAAATGTGAGCCCCCAGACTCGGGGGCAACCTGAGATGGATCAGGCCTCTTCTCCCCAGCTTCATCCCTTCACTCAGTTTCATTCCTAAATGAAAATGGCCTGGAAAAGAACCAGGGAAATTCCTGGGCAGTTTTTAGGAATATTTTCTTCTTTCTGTCATTTTGCTTTCATACAAAGTAATTCTGACTTCCTTTTAAAATCCTCTTAAATAAATAGTCTCTTACTCTTGTGTTTTTACTGCTAGTGAGAGGGTGTGTGCTGTTTAGTCGCTCAGTCAGGTCCAACTCTTCGCGATCCCATGGACTGCAGCCTGCCAGGTTCCTCTGTCCATGGGCATTCTCCAGGCAAGAATACTGGAATGGGTTGCCATTCCCTTCTCCAGGGGCTCTTCCCAACCCAAGGATCAAACTCAGGTCTCCTGCATTACAGGCAGATTCTTTACCAACTGAGCCACCAGGGAAGCCCCCAATGAGAAGGTACATAAGGTTTATTTTATACACTGATAATATGCAAACTAGTTTCTAAGACAATTAGAAACTAAAGCTAGATTGCTTCTAGTACACATTTAAATGTTAAAATTTTAGTTATACCAATTTATAAATGAACTCAATCTAGTGCCCAAAATTTGATTTCTCAATACCACTTCTACAAAAAAGTGAAACCAAGAATCCTTGCAGAAATGATTGATTCCAGGGCTGGAGAGGTGAAAATATAAGATGAGTATCTTGTGGTGCCTGAAAATCAGAGAAAGACACAAAAAAGGATGGGAACATGTAAGGTGAAACAGGAGCCAACTTGAAAGACACCCAACAGCTAAAGCTAGAATAATTTATGCCACAAAATAAATAACAACACACCTCACTACACTCCCCAAATAAACACCCAACATCACACACTGATGTAATTGATATAATTAAGTAAATAAACAAGTGGGAGAGAAGGCACAACTCTTCCTCACAAAGGATTCCAGTTAATAAATGTAGTCAAAAAACACAAAAAATGAAAAGTTCCTAGGAGAACATCACAATAACAACTACTGTAGGCAAGATTCACCAAGAAATGCTAACTAGTAGGAAAAGCATATTTCTATGCAAAGTCTCAAAGTATCTACCTCAAAATAATTGCTAATTACAAAGGACAGACAGTAACTTTACAATCATTAATCCTTGGCAGAAATACTGGATCAAGAGTAATATCACCAGGAAAAAGACATACGAACATCAATCTCAGTCTAAGCAGGAGAACATCTGACAAAACCAAATCGAGAGGGTCAGTCTAAAATTACAAATATAAAATACTTTAAAAGTGTCAAGTAAAACTGAGGAGCTGTCACAGACTGAAAGGGAGTGAGGAGACATAACAATTAAATGCAATGAGGGATTCTAGACTGGATTCTCAAAATCCAGGAAAAGAACATTCGCTAGCCAGTCAGGAGCTCTAGATAAATCAGTAGTTTAATTACTAGTACTGCCACCACTGGAAATGTCTCAAATTTGATGACTGTCCAATGGTTATGCATGACATTGCCTTTAGGTATACCAGGTAAAGATACAAGGGAAGTCTACAAAATTCTGACAGTCTCTGTGAGTCTACAATTATTCAAAATAAAAAGGTTTTCAAACTGAAGTTTGAGTTGTTACTGTGTTTATTTCTATCTAGAAATAGTAATGTCTATATACTAAGGATTAACTTGGCAGTAAGGTGTTGAATAGGGGCTACCCAGGTGGCACAGTGGTAAAGATCCACCTACCACTGCAGTAGATGTGGGTGATCCCTGGGTCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAAAGGTCCGTCTAGTCAAAGCTATGGTTTTTCCAGTAGGCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCTGAAGAATTGATGCTTTTGAATTGTGGTGTTGAAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAATCAGTCTATCCTAAAGGAAATCAGTCCTGAATATTCACTGGAAGGACTGATGCTGAAGCTGAAACTCCCAATACTTTGGCCACTTGATGCGAAGAACTGACTCACTAGAAAAAAACCCTGATGCTGGAAAAGATTGAAGGCGGGAGGAGAAGGGGACGATGGCAAAATATTGAGAGGAAGGCTTTCAGCATAATGCCACCATTGGGCTAAGCATTGTTCTAGGAACACGTGATGAAGACAGAGTTCTCACCCCCAGAAAGCTTATATTTCACTGGCAGAGAAATAGACAATAAAGTAATAAATAAGGTAATTAAAAATTAATATGTGCCATAGAAAATATTATCAGGTAGTTTGAGAGAGAGAATGACTATCCTTGCTTTGTCAGCATGGTCCAGGATGGTCTCTCTGAAGACAACATACTTTTGCTGAGAGAAGTTGGAAAAGCTAAGGTTTGTCAGCTGCTGTATTGGAATATTGCTCCAGGTGTCAGCCTTGGTAGCATAATTCGTGCACATACAGGTACACACACCTATCACTTTTTACTTCCTTGGTACTTGTGATTGATCTGTTCTGTAGGTTAAGGCCCTTGGGAGCGTACAGAGTTACTGTCCTGACTCCTTTTTCTAGGTGGTTCTTCACGAGCACGTGTGTGTCTGAAGCACTAGCCCAGAGTGGAAATAGTTCTGTAATCTGGTCTTGAAGCTCCTGCCAAGATGGGCAACAGAGGAATGGCAAGTAGGACTGCAAGCTGTAGATCCTGCTTGGACAGTATTCTCCCACTTGGCTAACCTGGTAGGGCTAGAGGGACCCTCTGGCTCTTCTTTTCCTGGCTTCCTCTCTTGGGGGTGCTTCCTAGAGGTCTTGGGTTTTCTACCTTCATGAATGCTGTTTTGGACCCAATTTTATTTCCTTGTCTCTAG
Seq C2 exon
GTTTCCACTCCAGGGCAGGAACAGGAGATACATTCTGAAGAGAAGACAGCCTTGGGTGCAACACATGAATCTCCTTCTACCTCACCCCACAGTGAGGGTTCAGCCCCTGGAGCCCACCTGGAGCCTCCTCGTGATCCTGGGGCACACCACCACCTCTCCA
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000003622:ENSBTAT00000023585:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.106 A=NA C2=1.000
Domain overlap (PFAM):
C1:
PF0202312=SCAN=PU(96.9=66.0)
A:
NA
C2:
PF0202312=SCAN=PD(1.0=1.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]