BtaINT0004198 @ bosTau6
Intron Retention
Description
NA
Coordinates
chr12:33759060-33776421:-
Coord C1 exon
chr12:33776343-33776421
Coord A exon
chr12:33759122-33776342
Coord C2 exon
chr12:33759060-33759121
Length
17221 bp
Sequences
Splice sites
5' ss Seq
ATGGTAGGT
5' ss Score
8.6
3' ss Seq
GTAACTTCTTTGTTTTTCAGATA
3' ss Score
10.04
Exon sequences
Seq C1 exon
GTTTTCTGGGGTCACTGCATCAACGCCTTGGTCCACTCACTCATCCTGTTCTGGTTTCCCATGAAAGCGCTGGAGCATG
Seq A exon
GTAGGTAATGGCTTCGTGATTCAACTCTCACCAAGTAGCTTTGCAGCCCCTCCACGCCTGTTGTTCACAACTTTTTCCCCCAGTTCCACAGGCCTAGAGATCACAGGAACAAATTTCAGAAGAAAAACATACGTAACATCTAATGAGAGCTAGTCTCGGCTTTATAGCTTGTAGGTTTCACCCCTTCTGGCTCTAAGAACCCATTTTCTTTCCAGTTGCCTGGAGAGTTTAAATACTAAGAATCTGAAACTTTATTTTTAATAACGATTTGAGTCAAAGATCTTGAAGAAAAGCACTTTACTATAATGAAACATCAATGCCTCTTGCCCTCGAGTTTGAAATTTTCTGTTAATCACTTGGGCTTTCGTTTTCCAAGCCTGACGCACCTCTATGCCAAATAACTCAAATCTCACGAGAGTATAATTTTATACCCTGTTTTCTGAAAGTCTCTTTTCCTTGATGTACACTTATCAAGCAAATGTTTAAAGTTTGTTGGAGGCCGGACTATTCCAGTTGTTTTTAACCTTCGCTGAGCTGGAGGAGGGTGTGCTTGTTCTCATTAATGCATCTAAAATGTGGCTTCTTAAAGAGACATACCTTTTAGCCTCAAAAAATGAAAATGTATTACGAGAATGTCCGTCTATTACTCCTCTCAAATCGTAATAATACCTCCGGGGAAAGTTACTCCAAATGTTGACTAGACAAGGCCTCTGACTGTTCAGAGAACCAAAGGATATAAAGTTTACGAGCTTCTTTGTTTCTTCTTCCCAGTTTCTGTGTCAGTGGTTTTTGTGCTTCAGACGGACATGATTCATTCTCACTGATGTGCTTTAACCTGTCAAATATTGATGGTTAGAGAATATGCACGCACAGCCCATGTGTTATATACCTTATGACTTGTTCTCTATTGCATCGGACCTCCTTTTCTTTCAAGGGCCCCTGAGTCTCTTGCTTACTTGTGTGTGTGCTCAGTCGTGTCTGACGTTTTGCGATCCGTGGGCTGTAGCCTAACAAGTTCCTCTGTCCATGGACTTTCCCAGGCAAGACTACTGGAGTGGATTGCCATTGCCTACTCCACGCCAAAGTCTCTAAATGAGAAAGTAAATTTTTTTGCTTCTAGCCTCACCCCCAAAGGGGCATTCTAGATGAACCATTCTTTGAAACTTTCCTGTGATTCATCTTTATGTGTTGCTGTTGTTTAGGTGTTTCCGTCCTATCCGACTCTTTGCAGCCCCGTGGACTGTAGCCCACCAGCCTCCTCTGTCATGAGATTTCCCAAGCAAGACTACTGGAGTGGTTGCCATTTCCTTTACATGTAGTGGTTTTAATTTATTGGGTTGGCCAAAGAGTTCTTTTAATTTTTTTATAACATCATACAGAAAAACCTGAACAACCTTTTGACCAACCCAATATTTTGAAATGATTTTGTGATTAAGAGCTTACAAATATAAGAGTGTTGACTGTGCTTTGTATTAGAAGCTCTGGCAGTTTGGTGATAAAGTGGCTGTCTTTGTATCAGGCTGGGATGGTGATGGGAGGCAGTTTGTCTGCTGAGCACAAGAGCGGCTTTGGTACGTGTCCTCTGGTCCCCAAGCCCAGCCTTTCTTGAATAGGAAGAGACTCGTACTCGTACTGACTCTGGGTATTATCTCTAGGCTCACCACCCTCTTATGTCTACGGGGACTCTGTAAATACGTGGTGCTTGCTTTGGACTCATAGAAGTTTTCCAAGATGGTCCTTTACTTGCCCGCTTCAGAAGGAGCTAGTGCGGCCCCGTCTGATCAGGTGGTTTTCTGATCCTGAGTCATCATTATGTGCTTTGAGATGGCGGCTTGTATTTTTTGGTGGGATCACTATTGTTTACCTAGATCACATCGTGTAAATCCATCCACTCTCCCAATGTGGTCTGTATTTAAAAGAAGATAGATTCCCCAACAGTTACTAGTTTACCTACGAGGTGTCACCAGGTAGTTTCCACCACATGGCTTCCCTGGTAGCTCAGTTGGTTAAGAATCCCCCTGCAATGCAGGAGACCCCAGTTCAATTCCTGGGTTGGGAAGATCCACTGGAGAAGGGATAGGTTACCCACTCCAGTATTCTTGGGCTTCCCTTGTGGCTCAGCTGGTAAAGAATCCACCTGCAATGTGGGAGACCTGGGTTTGATCGCTGTGTTAGGAAGATCCCCTGGAGAAGGGAAAGGCTACCCACTGCAATATTCTGGCCTGGAGAATTCCATTGACTGTATAGTACATGGGGTCGCAAAGAATCAGACATAGCTGAGTGACTTTCACTTTATCTGCTTCATTCAGGTTAGGAATTTGCCTAGCAACCAAAAGGGTGACTTTTTTCCATTTTTTAATTGCCATGATGGTTAGCATCATTATTTCATATTTATTAAGCCTTCTGCATAGAGGTTTTCATTAGGTTATATTATAAACAGTAACCTTTTGACTGAAACTGTTGAAGGTGAAATGAATACCAAGTGTGAAGTCTATTTGGTAAAGAACAACAGAAGGCTGTGGTGTTCTTGGTCACTAGTTGATGTCCTCTAACAAATGGAATGAAAATTGTAGGATTCATTCCTAAATTCTCACTATTAGTACACCACAAACATGATTACAATGTCCCTCAGCCTTATTCTTTGATGTGATATTTATGTCCAAGGCCCTGTGATAGAGTCTGAGGGTGGTGGGTAAACATGGCAATGTGGGTCTTCCTGTCAAAGCATTTGAAGTCTGGTAAGGGACGTGGATAATTCTAGTGCAGGCAGAAAGTAGCTCTCTCAAGTAAAATCCAGAGGAAGCACTCTCAGATTGCAGGGGGCTGAAAGAGATGTCTTTCATTTAGGATGACTCATGGCTTGTTGAAGGGGATAACGTGTAGGCTTAGCCTGGAAGTCCAGGCAGAGCAAGATGCCAGGGTTGGAGGGAAGAGCTGAATGAAGGGGATGATTCAGGACAGATGCGGAGAGCTTGAGAAGTTCATTCCTTACAGGGAGGAAGGCAGAAGAGTTGGAGAAGGTGGGTGAAATCTGAACTGCAGAGAGCTTGGAATGCAATGTTAAGAAGCCAAGATTCCATTTGGAAGCATTGAACAGTCAGTAGCATTTAGATTGAGCTGAGTATTGCGAGCAGAGCAATTTTGGGAAGTTAAAACCATCATATCTTGTAAGGCTGATAGGAGAAGGAAAACTGATAGCAGGAGTCCTGGTTAGGTCCTCAGCTCTTCCAGGGAGCTTAAGGAGGGTTAAACCTGGGACTAGGGATGTGTTTAGCCAAGGGAGAACTTGTCTTGAGAAGAAGTCCTTCAGCAGAATCATAGCAGACCAATGATGTGCCGGGTGCCAAGGGCGTGGTGGACACTAAAAAACGCAGCTTGTCTTGCTCTCTGGGGGCTTCTGTGAGGTCAGAGCTGATGATCGGGAAGAAGATGTTAGATGATCAGGAATTATGCACGTAATTGCTTAATGGCCAGTGTGCTGTGTTCTACAGGCTGCTGGGGAGCTTGTAATACCGGGACATAACCTAGTCTAGTGGGTCAAGGAAGCATCTTCTCCAAGGAAGTAAGTAGTACTTACGTTCTTAAAAAAGGAGCAGAGAGTGAGCAGGTAGGGCAGGGGAGGTGTAGGGAAAGTAGGGGAGAAAGAGCATTCCTGACAGGGAGCACAAGCACACAGGGCTCGTGCTGCCCGGGAGCTGGGAGAGTCCTTGGGCAGTGGCTCCCAAGGGAATGCAGGGGTGGACTCAGGATCTTGTTCAGCCTTTGGTGAGCACTTCCAGACCCTGAGCTTCCCTGGCCGTGGACAGTGAACCCTCTCCCCACCGCCTTTCCCCCCATCCTTGTGCAGCTGTGAACCAGAACATGACTGCACGCATTTCCAGCATCCCCTCTGCGTCTGCAGCAGCACCCTAGTCGAGAGGGCAGTAGCATAGGAATTTTAGGTTGAGGGTCAGATCACTAAAACCCAGATGAGGGAGAGGTTTGGGGTGGGAGAGTTATACCCCGGACTTGCCTCCGAGGAAGACAAGACAGCCGTGTAGAGAAGTGCCTCAGGTCTGGCAAGAGCACAGGTCTTTGTGTGTTCGGTTTTTTAGTGGAGGGAAGGAAGTCAGAGGAGGAAATCAAAAAGCTTGCAAGTTTGAGAAGAACCAGGATGTGGCAGCTGATTTGATTACTTGGTCATGGGCTGATTGCCCTAAATAACAATGAGCTCCTGTTAACACTTTGAACCATCCCTTAGAAGGAGGCATTCACCCTGCTTCCAAAGAAGTGTTGGAAAATGGCACCAATTTGAGACAAACGAGAGCATCTTCAAACCACGGAGAGCCTGATCTCATAGAACAGTGCCTTGGGTCCCCCACCCCCGCTCCAGCCCCAAGTCCTGCCGGAAGCTGTCAGCCGTGGGCTACACTCAGCCCTGAGGACCTTTACTCGACTGGGGGCTGAGATCCACAGAGCAGCTTGGTTGCAGTGTTTCATGTTCTGTGGGCTGCATCGTCAGTGTGGTGGATTCTACCAGGAAATGTTCTCCAGGCTCCCTCGAGAAAGGCTTAGGTACAGACAGAGCTGGTCACTCCGGCATCATTGTTGGCAAGAAACGTTTCTGAGAGGTGCTAGCCCGTCAATCATTCCTTAAGAAGCATCCAAGAATTTTGCTTTGCTTATTTCTGTGTGGTTTTGGATAGAATTTTCAAAGCAGTGCTCGGCTGATGGAGTTTGTGATGATTCATTTCAAGTTTCAAACTACATTTTTCCACTCCAGCAATTCTGTAGTAAATCAGATTTCTTCCAACCATCACAACCTTACGCTCACGGCCATGGCCAGTCTGCAGCTCCCAGCCTTCAAACTTAAACATGATTCTAGGTTAAAACCCAAGATGTCACCTTTGCAGGGACTGAAATTCACCAAGACTTTGATGTTGGGCCACTCTTGGACTTTCCAGTGGTGTATCCAGTATGCATATTTGAGCAACCCTCCTTGAAGTGGAATGTGGTTATTGGCAAATCCATTTTGATTTTTTAAAAAGGAAATTTTCAGATTTTGTTCTTCTTGATGGAATTTAAGAGGGAAGGGATAGGAATATATTTAGCATCAGAGAAAAATGGCCCCCCAAAAGATTTATTCTTGATTCCTCCCTGTCTACACTCTGGAAACTATCCCTATCTCTTTCCAGAAGAAATGCGATGTAGATATTTATTATATTGGCACTAATTAAGCAGTAGGATCTCTGAACATTTTTGGAGAAGGCTACATTATATTTTCTAATAAATGTGCTGCTGTGAGATTAGACACATTTTATAAACTGAAATGATAGTATACCTGTATAAAATGAGATGTAGGGTACTTCTCTCTGCCTGTGGCAGTACTGGGTCATTTTAGCTTGAATTATTTATGACCCTATACCTGTTACTATAAACTTGGTTATTTTTATGTCACGTAAGTTTCACATTAAGCTAAAGTGGGGTTAGATTGCCCTTGTTCTCTGAGATTGCATCTTCTTAAGATCAATTACTCATTCATTTAAAAAAAAAAAGACAAGTGACTGCGTCCTTTGTGCCAGGTCCCTTTTGGCAGATGTAGTACAAGTCCAGTAGGCAGATTCCCTGCCCTCGTGGAGCTCACACGGGACAAAGCAGGACTGAACAGAAAGTGTAATGAGAGGACGATCGAGGTCAAATGGTGTGCGTTCCAAGGACCACTGATCTGGCCCTGGGTTTGAGGATGTGTTACATAGTCAAAGGATGCGAGGGAGGAGAGAGCTGGGAAGAGAGTAGGGAGGGAAGGGTTTCAGGCTATGGGAATAGCATGGGTAAGAGGCTGTGATTCAGAGTCAGAGAAGACATGTGTGGGTGGAAGACTGAGGAGCGAGGCTGTGAGATCGATTGCCTAAGGATGGTAAAGGATGGAGACCAAGAGATCAGACCTTTCCCAGTCTTGGGGACTAGTGAGCCTTTTGAAGTATAAGTTCAGCGGGAGCCACTGATGGGTTATAAGCAGAGAGCCAAGTAGCTGATGAATTTCAAGGTGACTACACTGGCCAGAACGATTTTTGGCATCCAGCTAGTTGGCTATTGCTTAGGTTGTGTAGTGACAGCATCGGAGAAGTGGACGGATTAGAGGGCTCCTAGAGGGGCAGAACTGGAGGGATCCAATATTGCATTTATGAAAACTTCCTGGGTCTGTCTGACTGTGCGTGCGTGTGTGCCAAGTTGCTTTAGTCGTGTCTGACTCTGTGTGACCCCAGGGACTGTAGCCTGCCAAGCTCCTCTGTCTATGGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCGTGCCTTCCTCCAGTGGGCCTTCCCAACCCAGGAATCAAACCTGCACCTCCTGTAGGGCAGGCAGATTCTTACCACTGAGCCACCTGGGAAGCCAATATTTTCTCAAGAAGATAATAATAAACTGTACAACTTGGACTTCTTCCATGTCCCAAAGTATGATTCATTAGCCGTTTCTATTTTGCACTGTTGACAACTTCTGTAACCTGACTGTGTCACATGTATTTTACACAGTTGGGTTTGATGTAATGCTGTAAAAAGTATGAGCTGGAGTTCTTAGATTTCACCTTTAGAACTCTGTCAAGAAGTTGAATCAAGGTGTATTAGGGTAGGGACAGCTGCTGCAACAAACAACCCCCAAATATCAAGGGCTTAGCCCAGTAAAGGCTTATTCTGCCTCGTGTCATCATCAAATGGAATAGTATATTGTACATGGTATATTGACGCTGTTTTCATTTTCCACATTTGTGATGCCCTGGTATTACACCTTGATCCTGGAAAAGGTCAGTTTTCATCCCAGTCCCAAAGAAAGGCAGTGACAAAGAGTGTTCAAACTATCGCACAATTGCACTCATCTCACACGCTAGCAAAGTAATGCTCAAAATTTTCCAAGCCAGGCTTCAACAGTATGTAAACCATGAACCCTCAGATGTTCAAGCTGGATTTAGAAAAGGCAGAGGAACGAGACATCAAATTGCCAACATCCATTGGATCATTGAAAAAGCAAGAGAATACCAGAAAAGCATCTGCTTTATTGACTACGCCAAAGCCTTTGACTGTGTAGATCATAACAAACTGTGGAAAATTTGGAAAGAAATGGGAATACCAGACCACCTGACCTGCCTCCTGAGAAATCTGTATGCAGGTCAAGAAACAACAGTGAGAACTGGACATGGAACAAAAGACTGGTTCCAAATCGGGAAAGGAGTACGCCAAGGCTGTATATTGTCACCCTGCTTATTTAACTTATATGCAGACACCATGAGAAACACGAGGCTGGGTGAAGCACAAGCTGGAACGAAGATTGCTGGGAGAAATATTAATAACCTCAGATATGCAGATGACACCACCATTATGGCAGAAAGCAAAGAAGAACTAAAGAGTCTCTTGATGAAAGTGAAAGAGGAGAGTGAAAAAGCTGGCTTAAAACTCAGCTTTCAAAAAATGAAGATCATGGCATCCAGTCCCATCACTTCATGGCAAATAGATGGGGAAACAATGGGAACAGTGACAGACTTTATTTTCTTGGGCTCCAAAATCACTGCAGATGGTGACTGCAGCCATGAAATTAAGACACTTGATCCTTGGAAGAAAAGCTATGACCAACCTAGATAGCATTTTAAAAAGCAGAGACATTATTTTGCTAACAAAGGTCCATCTAGTCAAAGCTATGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCCAAAGAATTGGTGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCAAACCAGTCAGTCTGAAAGGACATCAGTCCTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAACTCTAATACTTTGGCCACCTGATGCAAAGAACTGACTCCTTGGAAAAGACCCTGATGCTGGGAAAGATTGAAGGCAGGAGAAGGGGACAACAGAGGATGAGATGGTTGGATGGCATTACCGACTCAGTGGACATGAGTTTGAGCAAGCTTCAGGAGTTGGTGGTGGACAGGGAAGCCTGGTGTGCTGCAGTCCATGGGGTCGCAAAGAGTTGGACACAACTGAGTGACTAAACTGAACTGGTCTTGGAGAGACTGTGTTCCCAGGGTTGGCTGATTCCTAGAGCAGATAGCTCCCCTGCAGGCTTGCCTTTGATATCCAGCCAACAGTTCTGGGGCCCCCAGACATCTCTGTATCTTACTATCTCACACCAGACTAATGTTCTGTACCCTAAATCACCCTGGAGCAGGTATAACATAGCTAGGGGTCAACCCTGAACCCAGAGGCTGTTGAAATTGTTCACACTTATCCAACCCTGAGCTTACACAGTGTATCTACCCTGCCTGGTCCATTTTATCCTGTGAAAACCCAAATAAAAGCTCTGGGTCATGTTTTGTCCTCTCCCCTCCTGCCTGACCCTGCTGTTTCCCCATGTGGCCCAGCCTGACATCCTGTGTGTCCTGTTTTTAGGGATCCTTAAGTATAAACTTTGTCCTTCATGACCATCACATCCATGTCTATTTCTCTTCTAACATCTGGTTAAAACAAGCCCTGGATTCATCTCCATAGTGGTGCTTCATCTGTTCATGGCACCCAAGTTCACCCTTAGCCTCACACAGGGACAAGAGAGGGCCAGGAGGACTGATGGCTCTTAACCTTCTCTGGCAGGACAGGATCCTTCACTTCTGATTGGCGAGAACTAGTCACAGGGCCCTCCTAGGTAGGACGGCCTCAGACTGTCCCTAGATCTGCTCCTGGGAGTCAGAAATGAGCCTGTGCCTACAAGATGGCTGTTTGACATCGACAGGCAGTTGAGTTTACTTTCCATCATTTTCACTTCCCTTTTAAAGTCTATTTTTAGTAAATAAGAATGAAAAAAGAGAAAGGTTGAACTCTGAGTTTCATATCCTTAACTTTATCCAGCAGAAATGTCAGTACAGAGGAGAAAATCCAGAAAAAGGCTTATATAACCAGGAACTTAACCCAGCGCTGGTTCTCAATGTAATTATAATCACTAACACTTGTATAAACTGTACCTTTTAGAAATGCCTTGCAATAGTGTATGGCACTCTTTACAGAGAAAGGAAAAATGAATCTTCTCTTTATGAATACACAGCATCAGAAGCAAAAAGAATCATTTCAGTTGTCATACAGACAGTGCAGACATTTGAGCAGGATGAGTTCTAAGTGCATTTGTAAGTGAGTTCTTTGACACTTGGAAGACATTTTCACTCTTGATATTCATCCAGTAGTAGCTGGTTGGCATTGTACCTCTGAGCCTTTGCCACCTTAAGAGGCCCCAAGAGTGAGATCGGGAGAGGAGAGCCTGTTAATATGCTGGAACAAGGGCTGCTCTGAATTGGTGCTACTGAAGGTTCGAGGCTCAGATGCTAAAGGATCCACGTGCAATACAGGAGACGCAGGTTCGATCCCTGGGTTGGGAAGATCTCCTGGATAAGGGAATGGCAACCCATTCCAGTATTCTTGCCTGGGAAATTCCATGGACAGAGGAGCCTGGTGGGCTGCAAAGAGTCGGATACGCCTGATTGACTAACACACACACTGAATTGGTGCTGCTGAAGGAAAAGGTCAGAAGATGGAGAACAGGAGGGACTTGGCATCTTCTCTCCAGCCAAAATTCTTGACAGATGCCCTGGTGTCTGTTGAGGGAACGGTGCCATCTCCCTAATTCTTCCTCTGGAGTCAGATGTGTGTGCAATGCTGTGATTTTGAATCTAGGCCTCCACAGGTTCTTACTACACCAAAAACACATGTATGCATTCACCCCATCTGTTTTCTTGATTATTGAGCCCTGTCTTCTCTGGCTGCACAGGACTATGCTGTAACTTAGGCTTCAGATTTTGCTTTTCGTCAAAGCCCTCTCTGAATACGTTTTTGTGGTTTAGCCGGGTCATAATGTAATGTGTTTAACGAGCATTTCATTGAAATGGCATCTTTATAAGATGTCATCAGCCTAGCCCCTTGAAAACCTCTGAGGTAAGTTCCCCAATCATTCTGCCTGTTTAGAAAACGAGATGAACTTTCCCCACACATATTCTCAGAGAGCGTTTTGCCTGCAGCGTTTGGGGCTGTCACTAGTCACTGGAGGGTCCATGTGGGTTTGTTGTCATTGTTCACACCAGTCGGTTTAGTGTCTGGGTTTGTCAACCTCATTTGGCTATTCCTACATCATGCCAGTCCCTGACTCCAACCCGACTTTGCAGATGATGTAAGTCTGGACCAACAGGCTGGGCAGCTGCTGAGGGTCTGTGGGTCCTGAAGCCACGGCATCATTTCTGTCCGGAGGAGAATGAGTGGCTCTCAGGACAGGGCTTCAGGCACCCGTAATACCACCTCTGATGCACACGGTCATCCCATCATTGTATCGGATTTTACCCCACGTGAAGCCCCACCAGGTGATTCTATATGTGACCAACAAGTGAGACTAGCATCTTTCCCACTCTTATGGCTTCTTTTACCTTGTGGAGCTCTTTACCTGGACCTCGGGGACAGGGAGCACACACTGCCCCCCCTCATTTCAGCTCTCCTCTCGGGGGTGCTGATCCGCAATCTCGGTCTCGTGGCTGGTCTCACATGGTCCAGTGAGATGCTGAGGAGAGTGCTGATGCAACAGGCAGCCCGCTTCCCTCCTCTTCCCTCGCTCACGCCCCCCTCGCTCCCTTTCCCCCTCCCCCTCCCTCCCCAACGCCGGCCTGGACCTGCTGGACCTTTGTGTGCTAGTGATGATTTCTGCTGGGAGATGCTCAACGTCTTGCTGGTGAATAAAGGTGTGTGGAGATCACCTCTCTCCACCTGCGCATTGGATGAGTTTCTTTACTGGGACCTTCTCAGAACCTGGAATGGCCTGGCTCCCGCTGACATCACTGTCTGATGCAGTGCAAGCATCCACCCCCATGTCTCTAGGCAGACGGATTTCCTTTTGTGCCTGAACTGTCCTTTCCCCTCTCGCTGCCCCCTTCCTCCCTATATCCATCTGTGCCCCCCGTGCTGCTTCATCTGCATAATCTTATCATCACTTACATAGATGGTGGATAAATATGTTCTAAAAGGCTGGCTTGGGAACCCAATGACTTACCTTGGTTTGGGGGTTCTTTATCTCCTATTAAAAAAAGTCACTTGAGTTTTAAATACCCTGCTAAAATGAAAACAGCTAAGCTACAGGAAAGTTGTTTTTCTGAGTACAGTGGTGAATTATAACAGTACTGTTAAGATTAAGCAAAACAGGAAGAAATAATTTGTGAGTAACATGCTGCAGAAATAATAAAGTGGACAGTCCAAATGGACTTTTCCAGCCTTGAATTATAAGCAAGCTGTAGCTTATGAATGTGTTCATCCACGAATGATTGTTTAAAACTTAGTGCCTTTTCTTTCATCAGGAGGATGCTACTGGCAAATTTTTAATAAGAACTGATGCCCACAGGTATTTCCCTCTAAAGCAGTCAAAATATAACCTTTAAGAGAACACGCTATCCTGTGGGAATTTCCCCAACAGGGTGGGCCAAGCAGTGACTTGTGAGTTGTTTAGTGGATGCTGTCTTTTCCAAGGCTGTTGGTATGTACAGAATCACAGTTTGGGAATTTCTCCTTCAAGGAATGAATTATTCCCAGATGGTATTAGTTTCGATTGGGCTGGGAGATGCTCTTTCCTAAGCAGAAACTTAAAATGCAGTGTTGAGTTATCCTTGAAAAATGATGAGTTGGAATAATAGGGTTATCTTGGCATCACTAATCTTAAGTATTCAGACGAACTCAGTTGCAGGCAAGTTATGTAATGCCAGTAGCATTGGACTGTCATGGCAAGGTAGAAATACATGCCTTTTAAAATTCTAGAAGCTACAGTTAGAAGAGGTCCCTGGGTTTCACTACCTGTTTCTTCTGTTTGTGCCAAATTCCCAGCATGGTGGTCCATGGTCTTAAGGGTCTCCATGGAGATGCTCTCTGCATCAGTGAGCTCTCGATCCTGGAAGTGATCACAGGGTTTGCCCCTTTGAAGGCCATCAAGCAATGGCAGTTCCATCTCTTTGTACCAAGGCCTCACCTTGCTTCTCTGCTGATGGTGTGAACTGTGAGGTCCCAACACACTCTGCTCCTCGGCCTGACTACAGACGAGGGGTGTTCCCTTCATTTGCCGCTCTTATTTCAGGGTGTATTCTCTGTATTTATTCCAGCTCCTCTGTTTTCTTTCCTCTAATACTGTGATTCTCAATATGGGGAATTTTCCCCAAGGGACATTGGCAGTGTCCAGAGGCATTTTTTGTTGTCACATCTTGGTGGAGGATACTACTGGCTCACAACCAAGGGGTCGGTGCTGTGCTCATCTTGTGGATAGAGACCTGGCATGCTGCTGAACACACTACCATCCCAGGGACAGCACCCCCCAACTGCGTGAGAGACATGGACCCCAAAGAATAAAAGAAGACAACTTCAAGGGGGAAAATAACTAGATTAAGAAGAAGTCTTTCCAACACCTAATGGGAAGAAACTTTCTAGGAGAGAAATAAGGTGAAGATAAAAGTGAGATTCATGTGACAGAGATTCTGCACCACTTTGGGGTCCATTTGTCTGTTAGTGAAAGCGATGTCTTGTTTCCAGAGTTCACCATTTCTCACTCAGAGTATGGCCTCCCTTGTCATTTAGCTTCTCTTTGCTGCCCTAGTTTCCTCGTCTGAAACATGCAGGTCATAATGCCATTTCATAGCATTGCTGGAGCATCAGAGAAGTATTAGCATTTTAGTGTTGCGTATTAGTAATGCTAATAATAGTCGTCTACTAGTATTACATATACTAGTAAGCATCCTCGTGGAGGTAAAGTGCTTAGAACAGAGCCCATCTTATGCTTAGTAACGTAATTTCTATTTCCAGTGTAGAATTAACAAACGGTTTTCTGTTCATTAAGTGTATATTCCCTTGGTATCTCTAATTTTCTTGAAGAGATCGCTAGACTTTCCCATTCTGTTGTTTTCTTCTATTTCTTTGCATTGGTCGCTGAGGAAGGCTTTCTTATCTCTCCTTGCTATTCTTTGGAACTCTGCATTCAAATGGGTATATCTTTCCTTTTCTCCTTTGCTTTTCGCTTCCCGTCTTTTTACAGCTATGTGTAAGGCCTCCTCAGACAGCCATTTTGCTTTTTTGTATTTCTTTTTCTTGGGGATGGTCTTGATCCTGTCTCCTGTACAATGTCACGAACCTCCATCCATAGTTCATCAGGCACTCTGTCTATCAGATCTAGGCCCTTAAATCTATTTCTCACTTCCACTATAGTCATAAGGGATTTGATTTAGGTCATACCTGAATGGTCTAGTGGTTTTCTCCACTTTCTTCATTTTCAGTCTGAATTTGGCAATAAGGAGTTCATGATCCAAGCCACAGTCAGCTCCCAGTCTTGTTTTTGCTGACTGTATAGAGCTCCTCCATCTTTGGCTGCAAAGAATATAATCAATCTGATTTCGGTGTCAACCATCTGGTGATATCCATGTGTAGAGTCTTCTCTTGTGTTGTTGGAAGAGGGTGTTTGCTATGACCAGTGCATTTTCTTGGCAAAACTCTATTAGCCTTTGTCCTGCTTCATTCTGTACTCCAAGGCCAAATTTGCCTGTTACTCCAGGTGTTTCTTGACTTCCCACTTTTGCATTCCAGTCCCCTATAATGAAAAGGGCATCTTTTTTGGGTGTTAGTTCTAGAAGGTCTTGTAGGTCTTCATAGAACTGTTTAGCTTCAGCTTCTTCAGCGTTACTGGTCTGGGCATAGACTTGAATTACCGTGATATTGAATGGTTTGTCTTGGAGCAGTTGCAGCAATGAAATTAAAAGACGCTTACTCCTTGGAAGGAAAGTTATGACCAACCTAGATAGCATATTCAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCATCTAGTCAAGACTATGGTTTTACCAGTGGTCATGTATGGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCCCAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGACAACTCTTGAGAGTCCCTTGGGCTCCTGCAAGGAGATCCAACCAGTCCATCCTAAAAGAGATCATTCCTGGGTGTTCATTACAAAGACTGATGTTGAGGCTGAAACTCCAGTACTTTGGCCACCTGATGTGAAGAGCTGACTCATTGGAAAAAACCCTCATGCTGGGAAAGATTGAGGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGTTGGATGGCATCATCGACTCGATGGACATGGATTTGGGTGGACTCCGGGAGTTGATGATGGACAGAGAGGCCTGGTGTGCTGTGATTCATAGGGTCGCAAAGAGTCAGACATGACTGAGTGACTGAACTGAACTGAACTGAAGTGTATATTCTTGAAGTATGAAACACATTCTAAGTCCTCCATATGTAGACAAATGCTTTGTATATTTAATTACAACCAGCCTTTGTAATATTACTGTTGAAAGGAAGTTCAGAAGTTGTCAAACCATAATTGTAAACCTGGTTCTCAGCTTAGCCTCCCAGCCCTTCTAAGTCTACCATCTGATCAGCGTTTTCTCCAGACTCCGTCAGGGTTCATTTAGTAGACTCAGACCCTTAGATCACTGCTCATCTCATCAAAGTCTTTTCTTCATTTGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCATATGTAGACAAATGCTTTGTATATTTAATTACAACCAGCCTTTGTAATATTACTGTTGAAAGGAAGTTCAGAAGTTGTCAAACCATAATTGTAAACCTGGTTCTCAGCTTAGCCTCCCAGCCCTTCTAAGTCTACCATCTGATCAGCGTTTTCTCCAGACTCCGTCAGGGTTTCATTTAGGTAGAACTCAGGACCCTTAGATCACTGCTCATCTCAATCAAAAGTCTTTTCTTCATTTGTGAACTCAGAGGGCGAGACTAAAGATAGGAAATCCACCTTGAGCTAAAACGAATAGGAGGTAGTTCGGAAACTCTCAGTTTAGGTCTGAAGCTAACACAACTCGTGATGTCTCTTTGAAGATTCATCTGTCCTTATCCACCAATTTTCTTACCTAGAATCAGGAGAAAGGGAACACCCTGTGGCTGGATCCAGGGTCCCATGACGATCGTATTTTACCTGTGATGTACTTCGTCATTATGGTATTTGACAAAACTAAATAGATCTTGATTCTTTCATGAGTCAGATTCTTCAACAAACAGATGGGTAAATTGATGAGCCCAAATGTATGTGTACATCAGCTACTGGGTTGGAAATTTGAACACAAAAATCCGTATTTACTTGGCCTATAGGCCACAGGTCTAATTTGGGTATAAAGAAAGAATGAAAGGAGATTGGCGGTGTCACTCAAATAAACCATTTCTGAATTTAAAACAGGTTTTCAACCCTCAAGGTAAAAACCAGACTTTTCACAGCAAGCTAGCTGACCTGAACCAGATAATTCTCTTGTGGCTCAGCTGATAAAAAATCCACCTGCAATGCAGGCGATCTGGGTTTGATCCCTGGGTTGGGAAGATCCCCCAGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATTCCAGGGACTGTATAGTCCATGAGGTCACAAAGAATCAGACATGACTGAGGGACTTTCCCTTCACTTCTGTCTTAGTGATCATTATGTACATTGTCATTTCATAGTCATCCTTCAGAAGAAGAAAATGGAAAAGCTGCAAAATTAAGGCTTCACATCCTAGTTATATTGTCTAGGCATCTCGCATTGAATGTTTGCATTTACAGGTCCCAGTAATTCACATAGAAGTCGATGGAGAACATGAGTAGTGAAAGTCCTCCAGAATTCTGAGTGCAGTCGTCATCCACTCATTTTGTGTCACATAGTTATCTCTGCTATTGGCCTATAGTGCCAGTTTAGCAAAAATTAAAGACAAATGGTAAATGAACACGCAGAGACTTTCTAATACTAGCACCCACAGAGATAGATTTTTTTGGTTGTTTAGTCGCTTAGTCGTGTCCAACCCTTTGTGACCAATCCCATGAACTGTACGCCACTCTGTCCATGGGATTCTCCAGGCCAGAATACTGGAGTGGGTGGCCATTTTCTTCTTCAGGACCCAAGGATTGAACCCTCATTTCCTGCATTGGCAGATGGATTCTTTACCACTGAGCCACCAGGGAAACCCAGAGATAGATTAATATGGTTTATTCTATTCCTTCTTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGGAAAAGCTGCAAAATTAAGGCTTCACATCCTAGTTATATTGTCTAGGCATCTCGCATTGAATGTTTGCATTTACAGGTCCCAGTAATTCACATAGAAGTCGATGGAGAACATGAGTAGTGAAAGTCCTCCAGAATTCTGAGTGCAGTCGTCATCCACTCATTTTGTGTCACATAGTTATCTCTGCTATTGGCCTATAGTGCCAGTTTAGCAAAAATTAAAGACAAATGGTAAATGAACACGCAGAGACTTTCTAATACTAGCACCCACAGAGATAGATTTTTTTGGTTGTTTAGTCGCTTAGTCGTGTCCAACCCTTTGTGACCAATCCCATGAACTGTACGCCACTCTGTCCATGGGATTCTCCAGGCCAGAATACTGGAGTGGGTGGCCATTTTCTTCTTCAGGACCCAAGGATTGAACCCTCATTTCCTGCATTGGCAGATGGATTCTTTACCACTGAGCCACCAGGGAAACCCAGAGATAGATTAATATGGTTTTATTCTATTCCTTCTTCTAATAGACAAAGAGAAATTTTAATCTGTATGAAAAGTGGTTGGTTGGTTGTTTGGAAACCTGACTTTGTGTGTTTGCTTCATTTGGAGAAAATATAAGATGAAGAAATTCAGAGTTAGAAAGAGGAGGCATTAGAATCACAGACAAATGTCAATGTCTCTAAAGTTCTCTTTTTACATTCTGAGTAAAACAGACTTCAGGGCTCTACAGGTTAATTGTAACTTCTTTGTTTTTCAG
Seq C2 exon
ATACTGTGTTGGCCAATGGTCATGCCACAGACTATTTATTTGTTGGAAATATCGTTTATACT
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000019529:ENSBTAT00000061132:32
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF038578=Colicin_im=FE(22.4=100)
A:
NA
C2:
PF038578=Colicin_im=FE(17.2=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development