BtaINT0005186 @ bosTau6
Intron Retention
Description
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F1N6N4]
Coordinates
chr26:16270542-16286920:+
Coord C1 exon
chr26:16270542-16270729
Coord A exon
chr26:16270730-16286778
Coord C2 exon
chr26:16286779-16286920
Length
16049 bp
Sequences
Splice sites
5' ss Seq
AAGGTTAGA
5' ss Score
6.12
3' ss Seq
TCTTCATCTTTTCTTCCCAGGGC
3' ss Score
10.31
Exon sequences
Seq C1 exon
CTAAGGTCCAGGAAGAGATTGACCGTGTGATTGGAAGACACCGGAGCCCCTGCATGCAGGACAGAAGCCACATGCCCTACACGGATGCTGTGGTCCACGAGATCCAGAGATACATTGACCTGGTCCCTTCCAGTCTGCCCCATATGGTGACCCATGACATTGAACTCAGAAACTATATCATCCCCAAG
Seq A exon
GTTAGATTGGTTTCTCTTACAGTGACTTCAGTGGTCTTGACATTCCCATTTCATGGTATTGAAAGGTTGTTGTTGAATCACACGAAGACACCGGGATTCTTGGCCCCCAGAGGAGAACTCAATCTGGGGCCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAGGCATCAGAAGGGGGCAGAAAGAGTACCCACTTGCTAGTGTTAGCAATGAAGTTATATACTTGCCAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCACCAGACCTACTCCCATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATCCAGAGATTGTCCTCAGGCAGGACACATTATTGTTATATAATCCTAAGGAATGTAGAGAAGGAAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCAGTATGGGTGCAATCCTTAATGAACACAGATGAGAGAAGCACAAAAATCATATGTGTAGCAATTCAATGGTTTGTGTATTGTTTCCAGGTTAGTCTAGAAAGTTTATAACAGATTTTGACAGGTAGCAGTGTAAGTCTTCCAAATTTGTTCTGCTTTGTTAATATTGTTTTCCTGATCTTAGCTGTTTACTTTTCCAAACAATGTTAGTACTGGTTTGTCAATTTATCAAAGCTCCCTGCTGGGATTTTTATCAGTGTTATATTTGATCTATTTAGAAAGGTTTAACATCATGACTCATTTTATCTTTGTGTTAATAAACATGGTATATACTTCCAGTTTTGGGGGGTTTATAGTTCTCTCAAATTTTTTCAGTGTACTGATTGGCTTGCAAATCTTTTGTTGTTTTGTTTCCCCCCTAGGTGCTTAATATCATTCTTGCTTTTATAAACTTTTTAGTCTTTTCTATTTCTTTTATCTGGAATATGGGAATATAATCAGCTTTTATCATTTGATGATTTTAATGGTAAGAAACTTGATAATTTTAAAATCATTACTAATAATCTTTCTCTAAATTAATTGCAATTTCTATATACATTGCCCTGTAATCTGGGTTAATATCCGTGTTTCATCTTTGTTTCATTTCTGATCTATGGGAGAGTGGAGGTTAACCTCTCACTACTGAGCATGTTTTATGTACATTTTGGTAGATTTTAAAACTTAGATTAGGAAAATTTACCCTCTTTATTTTTTATGATTTATAGGTTATAATTGCTATATAATTTTTTCATATTGATTTCTACAACTATTGCTATGATTGTATGGCCCCAATTTCCCACTAAATATACATACTATAAATATACACACAGCTGAATTTGGTTTGCTACATTTTGTTCAGAACTTTGCTGTTTAGAGTAAAGAATTTTGGTCTATATTTCTTCCTCAAAATTTTCTTGTCAGATTTCTGATATTGAGATAATGTTGTCCTTATAAAGTGAGATGAGAAATGTTCCCTATGGTGGACATATTTTATAAGTTTTCCCCTCTTCTACTTGTGGTCACCTAGCTGTGCCTTTGAAGTGCCCAATAACTTTTTGTTGAGTATCAATTGTTATAAATGAGAAAATGCTGAGTTTCAGACGATGTTTATATTCTTCCACAAAAAGTTCATCCTTCTCCTAGTGGATATTTGGAATGATATAACACCTCCCTTTTAAATAAAATGTGGGCATTGATATAAACTAAAATTATTAATAACTTTAGATGTTAAGGCGGTGGAAGCATGAGTCTTAACCATTGGACCACCAGGGAGGTCCCCCCAGCCTGTATTTCAAATTTTCCCACTTTTACTGGAATATCCTTTATGGTCTTTTTTTCCCTTTTTAATTCAATATCCAGCCAAAGAACAAGCATGAAATCTGGCTATCTTCACTTTTTAGTCTTCCATTATGAGTTCTCTTTGCCCTCTTTATTTTCTTTTAGTACATTTCACTTTGTGAAGTGTCCAGGCCAATACTCATGTAAAATATTCTTCAAGCTGGTTCTCTAGAAATTAGATTCCAGTTATGATTCGGCAAGAGAACTACATAGGTGCTTTGTGTTTCCCACTGAAATTCGTTGGGAAGGTGGGAGGCCACATTATGTCATTTATCTCGTTATCAGTTATGCACTGTTGTTCACATAATAAAATAGTATCTGTCAGGTTTTTCCATGGCCTATATTCTGGCTTTTTTTTACACTTAATTAATAAAAATCTATGGCATAGTACTAGAACTTGGTAAATTTCATGCTTATCATTCACCCTACATTTTTAGCATTAATAGGTAAATGTTGCTTAAGTCGGTGACCCTAAGCTGAATTGTTATAAAATGATTTTTCTATTTTTTCATCCTTTCTGTATGTTTCTTTTTTAATTTTATTTTTTAATTAATTAATTTATTGATTTAACTTTACAATATTGTATTGGTTTTGCCATACATTGACTTGGATCTGCCATGAGTGTACATGTGTTTCCCATCCTGAACCCCCCCTCCCACCTCCTTCCCCATCCCATCCCTCTGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTCCACATTATGCATTAGTATACTATATTGGTGTTTTTCTTTCTGGCTTACTTCACTCTGTACAATAGACTCCAGTTTCATCCATCTCATTAGAACTGATTCAAATGTATTCTTTTTAATGGCTGAGTGATATTCCATTGTGTGTATATACCACAGCTTTCTTATCCATTCATCTGTTGATGGATATCTAGCTTGCTTCCATGTCCTGGCTATTATAAACAGTCCTGCGATGGACATTGGGGTACATGTGTCTCTTTTGACTCTGGTTTCCTCAGTGTGTATGCCCAGCAGTGGGATTGCTGGGTCATAAGACAGTTCTATTTACAGTTTTTTAAGGAATATCCACACTGTTCTCCATAGAGGCTGTACTAGTTTGTATTCCCACCAACAGTATAAGAGGGTTCCCTTTTCTCCACACCTTCTCCAGCATTTATTGCTTGTAGACTTTTGGATAGCAGCCATTCTGACAGGCATGAAATGGTACCTCATAGTGGTTTTGATTTGCATTTCTCTGATAATGAGTGATGTTGAGCATCTTTTCATGTGTTTGTTAGCCATCTGTATGTCTTCTTTGGAGAAATGTGTTTAGTTCTTTGGCCCATTTTTTGATTGGGTTGTTTATTTTTCTGGAATTGAGCTGCAGGAGTTGCTTGTATATTTCTGAGATTAATTCTTTGTCAGTTGCTTCATTTGCTATTATTTTCTCCCATCTGAAGGCTGTCTTTTCACCTTGCTTATAGTTTCCTTTGTTGTGCAGAAGCTTTTAAATTTAATTAGGTCCCATTTGTTTATTTTTGCTTTTATTTCCAATATTCTAGGAGGTGAGTCATAGAGGATCCTGCTGTGGTTTATATCGGAGAGTGTTTTGCCTATGTTTTCTTCTAGGAGTTTAACAGTTTCTGGTCTTATGTTTAGCTCTTTAATCCATTTTGAGTTTATTTTAGTGTATGGTGTTAGAAAGTGTTCTAGTTTCATTCTTTTACAAGTGGTTGACCAGTTTTCCCAGCACCACTTGTTAAAGAGACTGTCTTTTCTCCATTGTATATTCTTGGCTCCTTTGCCAAAGATAAGGTGTCCACAGGTGTGTGGATTTATCTCTGGGCTTTCTATTTTGTTCCATTGATCTATATTTCTGTCTTTGTGCCAGTACCATACTGTCTTGATGACTGTGGCTTTGTAGTAGAGCCTGAAGTCAGGTAGGTTGATTCCTCCAGTTCCATTCTTCTTTCTCAAGATTGCTTTGGCTATTCGAGGTTTTTTGTATTTGCATACAAATTGTGAAATTATTTGTTCTAGTTCTCTGAAAAATACCATTGGTAGCTTGATAGGGATTGCACTGAATCTATAGATTGCTTTGGGTAATGTACTCATTTTCACTATATTGATACTTCCAATCCATGAACACAGTATATTTTTCCATTTATTTGTGTTCTCTTTGATTTCCTTCACCAGTGTTTTATAGTTTTCTATATATAGTTCTTTTGTTTCTCTAGGTCAATATATTCCTAAGTATTTTATTATTTTCGTTGCAAAGGTGAATGGAATTGTTTCCTTAATTTCTCTTTCTTTTCTTTTTTTTTTTTAATTTTATTTTATTTTTAAACTTTACAATATTGTATTAGTTTTGCCAAATATCGAAATGAATCTGCCACAGGTATACCCGCGTTCCCCATCCTGACCCCTCCTCCCTCCTCCCTCCCCTACCCTCCCTCTGGGTCGTCCCAGTGCACCAGCCCCAAGCATCCAGTACCGTGCATCGAACCTGGACCGGCGACTCGTTTCATACATGATATTATACATGTTTCAATGCTATTCTCCCAAATCTCCCCACCCTCTCCCTCTCCCACAGAGTCCATAAGACTGATCTATACATCGGTGTCTCTTTTGCAGTCTCGTACACAGGGTTATTGTTACCATCTTTCTAAATTCCATATATATGCGTTAGTATACTGTATTGGTGTTTTTCTTTCTGGCTTACTTCACTCTGTATAATAGGTTCCAGTTTCATCCATCTCATTAGAACTGATTCAAATGTATTCTTTTTAATGGCTGAGTAATACTCCATTGTGTATATGTACCACAGCTTTCTTATCCATTCATCTGCTGATGGACATCTAGGTTGCTTCCATGTCCTGGCTATTATAAACAGTGCTGTGATGAACATTGGGGTACACGTGTCTCTTTCCCTTCTGGTTTAACTGCAGTGTGTATGCCCAGCAGTGGGATTGCTGGATCATAAGGCAGTTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTACCCTCCCTCTGGGTCGTCCCAGTGCACCAGCCCCAAGCATCCAGTACCGTGCATCGAACCTGGACCGGCGACTCGTTTCATACATGATATTATACATGTTTCAATGCTATTCTCCCAAATCTCCCCACCCTCTCCCTCTCCCACAGAGTCCATAAGACTGATCTATACATCGGTGTCTCTTTTGCAGTCTCGTACACAGGGTTATTGTTACCATCTTTCTAAATTCCATATATATGCGTTAGTATACTGTATTGGTGTTTTTCTTTCTGGCTTACTTCACTCTGTATAATAGGTTCCAGTTTCATCCATCTCATTAGAACTGATTCAAATGTATTCTTTTTAATGGCTGAGTAATACTCCATTGTGTATATGTACCACAGCTTTCTTATCCATTCATCTGCTGATGGACATCTAGGTTGCTTCCATGTCCTGGCTATTATAAACAGTGCTGTGATGAACATTGGGGTACACGTGTCTCTTTCCCTTCTGGTTTCCTCAGTGTGTATGCCCAGCAGTGGGATTGCTGGATCATAAGGCAGTTCTATTTCCAGTTTTTTAAGGAATCTCCACACTGTTCTCCATAGTGGCTGTACTAGTTTGCATTCCCACCAACAGTGTAAGAGGGTTCCCTTTTCTCCACACCCTCTCCAGCATTTATTGCTTGTAGACTTTTGGATCGCAGCCATTCTGACTGGCGTGAAATGGTACCTCATAGTGGTTTTGATTTGCATTTCTCTGATAATGAGTGATGTTGAGCATCTTTTCATGTGTTTGTTAGCCATCTGTATGTCTTCTTTGGAGAAATGTCTATTTAATTCTTTGGCCCATTTTTTGATTGGGTCATTTATTTTTCTGGAGTTGAGCTGTAGGAGTTGCTTGTATATTTTTGAGATTAGTTGTTTGTCCGTTGCTTCATTTGCTATTATTTTCTCCCATTCTGAAGGCTGCCTTTTCACCTTGCTAATAGTTTCCTTTGTTGTGCAGAAGCTTTTAAGTTTAATTAGGACAGAAATATTGATCAATGGAACAAAATAGAAAGCCCAGAGATAAATCCACGCACCTATGGACACCTTATCTTTGACAAAGGAGGCAAGAATATACAATGGATTAAAGACAATCTCTTTAACAAGTGGTGCTGGGAAAACTGGTCAACCACTTGTAAAAGAATGAAACTAGAACACTTTCTAATACCTTACACAAAAATAAACTCAAAATGGATTAAAGATCTAACTGTAAGACCAGAAACTATAAAACTCCTAGAGGAGAACATAGGCAAAACACTCTCCGACATACATCACAGCAGGATCCTCTATGACCCACCTCCCAGAATATTGGAAATAAAAGCAAAAATAAACTAATGGGACCTAATTAAACCTAATTTCTCTTTCTGTTTTCTCTTTGTTAGTGTATATGAATGCAAGGGATGGCTGTGTGTTAATTTTATATCCTGCAACTTTACTATATTCATTGATTAGCTCTAGTAATTTTTTGGTGGAGTCTTTAGGGTTTTCTATGTAGAGGATCATGTCATCTATATACAGTCAGAGTTTTACTTCTTCTTTTCCAATCTGGATTCCTTTTCATTTTCTGCTCTGATGGCTGTGGTCAGAACTTCCAAAACTATGTTGAATAGCAGTGGTGACAGTGGGCACCCTCGTCTTGTTCCTGACTTTAAGGGAAATGCTTTCAAATTTTCACCATTGAGGATAATGTTTGCTGTGGGTTTGTCATATATAGTTTTTATTATGTTGAGGTATGTTCCTTCTATACCTGATTTCTGCAGGTTTTTTGTCATAAACGGATGTTGAATTTTGTCAAAGGTTTTCTCTGCATCTATTGAGATAATCATATGGTTTTTATCTTTCAATTTGTTAATGTGGTGTATTACATTGATTGATTTGCAGATATTGTATAATCCTTGCATCCCTGTGATAAAGCCCACTTGGTCATGATGTATGATCTTTTTAATGTGTTATTGGATTCTGTTTGCTAGAATTTTGTTAAGGATTTTTGCTTCTATGTTCGTCAGTGATATTGGCCTGTAGTTTTCTTTTTTTTGTGACATCTTTGTCAGGTTTTGGTATTAGGGTGATGGTGGCCTCATAGAATGAGTTTGGAAGCTTACCTTCCTCTGCGATTTTCTGGTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATCCCATGGAGGGTGGAGCCTGGTAGACTATAGTCCACGGGGCCGCAAAGAGTCACACACGACTTCTGGAATTTTCTGGAAGAGTTTGAGTAGGATAGGTGTTAGTTCTTCTCTAAATTTTTGGTAGAATTCAGCTGTGAAGCCGTCTGTTCTGGGCTTTTGTTTGTTGGAAGATTTCTGATTACAGTTTCAATTTCCGTGCTTGTGATGGGTCTGTTAAGATTTTCTATTTCTTCCTGGTTTAATTTTGGAAAGTTGTAATTCTCTAAGAATTTGTCCATATTTTCCAAGTTGTCCACTTTATTTACATATCAGATCAGATCAGTCGCTCAGTCGTGTCCGACTCTTTGCAACCCCATGAATTGCAGCACGTCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTCACTCAGACTCACGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATTCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAGTCCGTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTTGCATGAGGTGGCCAAAGTATTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTTCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTCCAAAAGCATCAATTCTTTGATGCTCAGCCTTCTTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGATGAACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGTGTCTTTTAATTTCATGGCTGCAGTCAACATCTGTAGTGATTTTGGAGCCCCCCAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTCCCATGAAGTGGTGGGACCGGATGCCATGATCTTTGTTTTCTGAATGTCGAGCTTTAAGCCAACTTTTTCACTCTCCACTTTCACTTTCATCAAGAGGCTTTTTAGTTCTTATTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTCCCGTCAATATTGAGTCCAGCTTGTGTTTCTTCCAGTCCAGTGTTTCTCTTGATGTACTCTGCATAGAAGTTCAATAAGCAGGGTGACAATATAAAGCCTTGACAAACTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTCCAGTCCTAACTGTTGCTTCCTGACCTGCATACAAATTTCTCAAGAGGCAGATCAGGTGGTCTGGTATTCCCATCTCTTTCAGAATTTTCCACCGTTTATTGTGATCCACAGAGTCAAAGGCTTTGACATAGTCAATAAAGCAGAAATTGATGTTTTTCTGGAACTCTCTTGCTTTTTCGATGATCCAGCGGATGTTGGCAATTTGATCTCTGGTTCCTCTGCCTTTTCCAAATCCAGCTTGAACATCAGGAAGTTCACGGTTCACATATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCTTGTGAGATGATAATAGTCTCTTATGATCGTTTGTATTTCTGTGTTGTCTGTTATGATCTTTCCATTTTCATTTCTAATTTTGTTGATTTGATTTTTCTCCCTTTGATGATGATTTTTCTCCCTTTCTTGATGAGTCTGGTTAATGGTTTGTCAATTTTATTTATCTTCTCAAAGAACCATCTTTTGGTTTTGTTGATTTTAGCTATAGTCTCTTTTGTTTCTTTTGCATTTATTTCTCCCCTAATTTTTAAGATTTCTTTCCTTCTACTAACGCTGGGGTTCATAATTTCTTCATTTTCAAGTTGCTTTAGGTGTAGAGTTAGGTTATTTATTTGACTTTTTTCTTGTTTCTTGAGGTATGCCTGTATTGCTATGAACCTTCCCCTTAGCACTGCTTTTACACTGTCCCATACGTTTGGAGTTGTTGTGTTTTCATTTTCATTCATTTCTATGCATATTTTGATTTCTTTTTTAATTTATTCTGTGATTTTTTTGGTTATTCAGCAGCATGTTTTTCAGCCTCCGTATGTTTTGATTTTTAATAGTTTTTCTCCTGTAATTAAGATCTAATCTTACTGCATTGTGGCCAGAAAAGGTGCTTGGAATGATTTCAATTTTTTTGAATTTACCAAGGCTAGATTTATGGCCCAGGATGTGATCTATCCTGGAGAAGCTTCCGTGTGTGCTTGAGAAAAAGGTGAAATTCATTGTTTTGGGGTAAAATGTCCTATACATATCAATTAGGTCTAACTGGTCTATTTTGTCATTTAAAGTTTGTGTTTCCTTGTTAATTTTGTTTAGTTGATCTATCCATAGGTGTGAGTGGGGTATTAAAGTCTCCCACTGTTATTGTATTATTGTTAATTCTCCCTTTCATACTTGTTAGCATTTGTCTTACATATTGTGGTGCTCCTATGTTGGGTGCATATATATTTATCATGGTTATATCTTCTTTGATCATTATGTAGTGTCCTTCTTTGTCTCTTTTCACATCCTTTGTTTTAGTCTATTTTATCTGATATGAGTATTGCTACTCCTGCTTTCCTTTGTTCTCTATTTGTGTGGAATATCTTTTTCCAGCCCTTCACTTTCAGTCTGTATGTGTCCCTTGTTTCTAGGTTTGTCTCTTGTAGACAACATATATAGGGGTCCTGTTTTTGTATCCATTCAGCCAGTCTTTGTCTTTTGGTTGGGGCATTCAACCCACTTACATTTAAGGTAATTCTTGATAAGTATGATCCCATTGCCATTTACTTTATTGTTTTGGGTTCGAGTTTATACACCCTGTCTGTGTTTCCTGTCTAGAGAAGATCCTTTAGCATTTGTTGGAGAGCTGGTTTGGTGGTGCTGAATTCTCTCAGCTTTTGCTTGTCTGTAAAGCTTTTGATTTCTGCTTCATATTTGAATGAGATCCTTGCTGGGTACAGAAATCTGGGCTGTAGGTTATTTTCTTTCATCACTTTAAGTATGCCCTGCCATTCCCTTCTGGCCTGAAGTGTTTTTATTGAAAGATCAGCTGTTATCCTTATGGGAATCCTCTTGTGTGTTATTTGTTTTTTTCCCTTGCTGCTTTTAATATTTGTTCTTCGTGTTTTATCTTTGTTAATTTGATTAATATGTGTCTTGGGTTGTTTCATCTTGGGTTTATCCTGTTTGGGAATCTCTGGGTTTCCTGGACTTGGGTGATTATTTCCTTCCCCCATTTTTGGGAAGTTTTCAATCTCTGGGTTTCCTGGACTTGGGTGATTATTTCCTTCCCCTATTTTTGGAAAGTTTTCAACTATTATCTTTTCAAGTATTTTCTCATGGTCTTTCTTTTTGTCTTCTTCTTCTGGGACTCCTATGATTTGAATGTTGGGGTGTTTAACATTGTCCCAGAGGTCTCTGAGATTGTCCTCATTTCTTTTAATTCTTTTTTCCTCTATGTTTCATTTATTTCTACCATTCTATCTACTACCTCACTTATCCTATCTTCTGCCTCCCTTATTCTACTTTTGTTTCCCTCCAGAGTGTTTTTTATCTCATTTATTGCATTATTCAGTATATATTAACTCTTTTTTATTTCTTCTAGGTCCTTGTTAAACCTTTCTTGCATCTTCTTGATCCTTGTCTCCAGTCTATTTATCTATATCTCCAACTTTTTTTCAAGATTTTGGATCATTTTCACTATCATTATTTGGAATTCTTTATCAGGTAGATTCCCTATCTCTTTCTCTTTTGTTTGGTTTGCTGGGCATTTATCCTGTTCCTTTACCTGCTGGGTATTTTTCTGCCTTTTCATCTTGTTTATATTGCTGCATTTGGGGTGGTGTTTCTGTATTCTGCCGTTTGGTGGTTCCTGTTTATTGTGGAAGTTCCTCACTGTTGGTGGGGTTGGATGGGTGGCTTGTCAAGGTTTCTGGTTAAGGAAGCTTGTGTCAGTGTACTGGTGGGTGGAGCTGGATTTTTTCTTTCTGGAGTGCAATGAAGTGTTCAGTAAAGTTTTGAGATGTCAATGGGCTTGGTGTGACTTTGGTCAGCCTGTATATTGCGGCTCAGAGTTATGTTCCTATGTTTCTGGAGAATTTGAGTGTTATGTCTTGCTCTGGAGCTTGTTGGCCCTTGGGTGGTGCTTGGTTTCAGTGTAGGTATGGAAGCATTTGATGAGCTCCTATCGATTAATGTTCCCTGGGTTCAGGAGTTCTCTGGTGTTCTCAGGATTTGGCCTTAAGCCTCCTGCCTCTGGTTTTCAGTCTTATTCTTACATTAGCCTCAAGACTTCACCTTCTATACAGCACCAGTGATAAAACATTGATGTAAATGATGAAAAGTTTCTCCACAGTGATGGGCACCTGGAGAGGTACACAGAGTTACGTGGACAAGAGAAGAGGGAGGAGGGAGATAGACGTGACCAGGAGGAGAAGAGGGGGAATCAAAAGGGAAGAGAGCAAGCTAGCCAGTAATCACTTCCCTATGTGCTCTCCACAGTCTGGATCCCCCAGAGATGTTCATGGAGTTGCACATAGAAGAGAAGAGGGAGGAAGGAGACAGAGGTGACTAGGAGGATAAAAGGGGGAATCAAAAGGAGAGCAACAGATCCAGCCAGTAATCAGTTCCCTGAGTGTTCTCCACAGCCCAGAACACACAAAGAGATTCACTGATTTGGGTAGAGAAGAAAAGGGGAAGGGGTGAAATAGAGGCGACCTGTTGGAGAAAAAGGAGAGTAAAAAGGGGGGAGAGAGCAATCAGGCCAGTGATCTCACTCCCAAGTAAAAATGGGTCCTGTAGATTGGGTTCTTAAAGGTACAAAGTTGATAACAAATATCAATAAGCAAAGATTAAAAATCTTGAATAAAGGTTAGATTCTCAAAAATACAATATTAAAAAACAAAAACAAAAACCCCCAAAAAACAAAAAACAAACAAAAAAACACAAAGTCACAGAAATTATAAAATATATATATATGAAGTTTGCTTTAAAAATAGAGTCTTTCTTTTTTATTTTTGCAAGGTAATAGTAGGTTATAAAAATGAAAATTAAAGGAGTAATGGGGACTTAAAAATAACCAAAAAAATAAAATAAAATAAAAATTTTTTAATTAAAAAAATAATACTAGTAAAAATATATCTAAGAATTTCTCTGGAGCCATTGCGGACAGTGTGGGGTTAGTTCATTTTCAGATAGTTCCTCGGTCTGGCTTGTACTTCTTGCAGTCTATAGGCCCCTTCCTATGTAATCGGTGCTAACTACAGTTTTAATCTATTGCACCTGAACCAAAGCAGTTCCCTCTGTTTATTTTAGCTTCCTCTGTTTACTGATCTCTTCAGTGTCTAATTTCTGCCCTGACACAAGGGGCGCGGTGGTGGTCACTTTTTTTTAGGCTCACTTGTTCAGTCGTGCTTTGGGGAGGGAGGAACACTGCAAACAAATATCACTGGTGTGTGTTCACAGTGATTCAGCCACAGTGAATCACAGCGTGTGTGCTTTCCCCGTCTACACTGCTCAGACTCCATGTTGCTCTGCTGGGAACTGTCTGATGTGGGCCCTGGTTTGCATGCACGTCCCACGTCTAAGCCGCTCAGGTTCATGTTCTTGGGTACTCCACAAAGGCGGACTTTGTTGGGCCTGCATTTTGCACCCATCCCAGGTCCGAGCAACTCAGGTGGCCAGGTCCTTGACACGCGTAGTCACCCTCAGTTGAAGGTTGCGACTTATCTCCTCCCCCGTCCCAGCCACTTGGTTTTCTGGGTGTACAACAGGCACACTTTCTCAGGTGTGCCGTGTGTCTCTTCTGGGAAGCTGATCTCTGGCTGCCACCCTGCCAGTGGATGTCGACCGTCCAGAATCCCAGAAAGTCTTGGTTATCAAGGAAGTCTGCTTGCAGTTTGGTGTAGGATGCCTCCTTGGGGCCACGATTGCCCCCTTCCAGCTCTGGCTGCCCTCACCTGCCTGTCTCTGACAGGGGATAGACTGGGTCCACAGCCAGCTAGCTCTGCTCAGTCCTTTGTTCTGTAAGCATGCCTGGCGGTGGTTAGGGCTTTTCCCAGGATCACAGGATAGCTATTCCACAGTCTGGGTTGCTATCTCAAGCTAGTTTCCTCAGATTGCCCTCAGGGGATTCAGGCCAGGTCCTTATCTTAAGCAGTGCAGCCTGCTCCTCCCTGTTCCTCCCCCGCTTGCTAGTGGGGGATGCGAGCCTCTGGGCTGTTGCACAGCTGGAAGTTGCTGTTATGCAGGTAATCTGTGAGTTTTAATTATTTATTTATTTTTCCTCCTGATTATTTTGCCCTCTGAGATTCCAAGGCTCGCCACAGACCCGCCTGGAGAGAGTGTTTCCTGGTGTTTGGAAACTTCTCTTTTTTTAAGACTCCCTTCCCAGGATGGATCTCAGTCCCTACATCTTTTGTCTCTCTTTTTACCTTTTATATTTTGTCCTACCTCCTTTCAAAGACAATGGGCTGCTTTTCTGGGTGCCTGATATCCTCTGCCAGCATTCAGAAGTTGTTCTGTGGAATCTGCTCAGGGCTCAAGTGTTCTTTCGATGAATTTGTGGGGGAGAAAGTGGTCTCCCCGTCCTATTCCTCTGCCATCTTAGGACCGCCCCCCCGCCCTTTCTATATGTTTTTAAGCTAGCATCCATCTCTAATGAACCCTGCCATATACTTTAAGACAAACAATCTGCATGGCAATGATAAATACTAGCAGTTGTTATTATACTTATTGTTATTATCACAGAATTTATTATTAATTAGATGAGAAATCTGTTTATAAAAGCCTTATGAACTTATAATCCAGACATCCCAAACTCTAAGAGTCTCCCCGTTTTAAACCATAATCCACATATTAGATGAGTGAAAACTAAAGTAGTGAAATAAGGCAGCTGATGGGGACAGACACCAGTATGATAAGCAGAATGGATTCAGAAGGTCTAACACACTAGGATCCATGAACTCACCACTTCAAATACCACTGTCACTTGCCTTAAGCTTATTCCTTATTTATTACTTCTTTGTCTGGCTCAAAATGCCATTGTCTTTCTTTGGACCTAGAATTCCTCACCTGTAGGTCATAATATTGGAATGAATAATTTATAACATTTCTTCCAGTTCCATGACTTCTTTATAATTCAGTTTATCTTCATCTTTTCTTCCCAG
Seq C2 exon
GGCACAGGTGTATTAGTATCACTGACTTCTGTGCTGTATGATGACAAAGTATTTCCTAACCCAGAAATGTTTGACCCTGGCCACTTCCTGGATGACAGTGGTAACTTTAAAAAGAGTGACCACTTCATGCCTTTCTCAGCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000023955:ENSBTAT00000007005:7
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.032 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0006717=p450=FE(13.5=100)
A:
NA
C2:
PF0006717=p450=FE(10.3=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]