BtaINT0015951 @ bosTau6
Intron Retention
Gene
ENSBTAG00000013191 | AGRN
Description
agrin [Source:HGNC Symbol;Acc:HGNC:329]
Coordinates
chr16:52691474-52710017:-
Coord C1 exon
chr16:52709756-52710017
Coord A exon
chr16:52691522-52709755
Coord C2 exon
chr16:52691474-52691521
Length
18234 bp
Sequences
Splice sites
5' ss Seq
AAGGTGTGT
5' ss Score
6.64
3' ss Seq
GAGATTTGTTTTTTTTCCAGACA
3' ss Score
6.88
Exon sequences
Seq C1 exon
GTTCGGGTCTGGCGGTACCTGAAGGGCAAAGATGTGGTGGCCCAGGAAAGCCTGCTGGACGGAGGCAACAAAGTGGTGATTGGCGGCTTCGGAGACCCCCTCATCTGTGACAACCAGGTGTCCACTGGAGACACCAGGATCTTCTTTGTGAACCCTGCCCCGCCATACCTGTGGCCCGCCCACAAGAATGAGCTGATGCTAAACTCCAGCCTCATGCGCATCACCCTGCGGAACCTGGAGGAGGTCGAGCACTGTGTGGAAG
Seq A exon
GTGTGTGTGGGGCCGAGCAGAGCAGGTGCCTTGGGGGCAGAAGGGAGCTTGTCCTAGGCTAGGGCACATGGCATCTTGTGGTCCGACCTCCTTTTCTGGGTCCTGGCTCCCTGGTTTCCTGGCCACCTCAGCTCCAGACTCTTAACATAAGCAGCACTCCCCACCCTGGCCCTAGTGTTGCCACTATCTGTCATCTTGGAGTCTCAGACCTGCAAAGGGATAGGCCTCCCATTCTTCCCTCCGCCTCCCCAGCTCTGCACGCCCCTTCCTGGAGTTCCCTGTTCTAGGAAAGAGGCTGGAACCAGGTGAACGAACACCAGTTGTTTGTGTTCTGCAGAAGCCCGAACACATGTCTAGACGGGGCCCAGATGTTGAGCCTTTGGGGTGGGGCTTAAAGATTGTGCTGGAGGGGAGGCTACCCTGTTATGTGTTCCCAGAGGCCTGCCATTTCTGGGAAGGGACAGTTATGTGGAGTGAGCTGCTTCTAGGAGTTTGAGGGGTTGTGGGATCCCCTGACAGAGGTGGAGCATCTTTCCTTGTCTGCTGTCCCCATGTGTCTATTCTGAATGGCTCAAGAGCAACCCTCCCTCACATGATGGCTCACCCATCCCCTTCACCCCAGGAGAATCCCAGTTGGGGGCTGAGATCCTTGGCTGAGGAATGTAGCAGGGAGAAGTAGGAACTGCCTGTCGCCCTCACATCCTGTCTGTCCCCTCATGGCTGCCTGGGGAGGGATGTATGGGAGGAGGTGGAGAGATCGCTTCCTCCCAGGGCAGCAGGAAGGGTCCCTGACTTCCTGTCCTGGGAAGGCGACCCTGTCCCTGTGACTTGCTCTGTTGGCCGGTAGGGAAGTTCCATCTTCTACCCAACTTAACTCCTGTGGTGCTGGCTTGCTTTTGTGGGATCCTGGATGGTGGACTCATCTGGCCTGGGGCAGACTGTGTGTGTGTGTGGCGAGGTGTGGAACCTGAAGTGGAGAGCCCTGTAGCATCCTGCTCGGCCTGCAGTCATTTGCTCCTGGGATTGCATCTATGGTCCTGATGCAACATCGCACAGAGATGCCAGCAGGGCTGTGTCCCTGGTCCCTTCCCAGCACTAGCATAGCTGAGGGGTCCCAGCATAGCCCTCCCACCAGGTGAGGACTGGAGACCCTGACTGTGCTTTGGAAGCTTTACTCTAGGGGAAATATGGGAGAGTGGCATGGAGAGGAGGCAGGTTGTAGGGTGTGATCCCCAGTTTTGGAGGATGAGTTGGAGACTAATGAGAGGTGGGAAGAGGGGTCAGGCTGCAGAAAATCTGTTTCTGCAAGATCAAGAAGACAAGTCATTAACTCCATAGCTGGAAGGGTCTAGTTCGAGGGTCTGTGGGGTCAGAGGGCATGTGGCAGGGGGGCCACCCTAGGCAGAAGAGGGTCTGCCATCTTGCCAGGTCCTATTCTACCCAGGCCAGGCCCTGGCTCTGGATATGTCAGCCTGGGCACAGGACCCCTGGAAAGGAGGGTCTGCAGAGAGAGCCCCCAGTGAGACTTCATCTGCTGTCTGCTGGCTACCCCGGATAGGGACCAGTCTAGGCCCCCAGCTCCAGCTGGGCCAGTGTGGGCATGGTGGTGGAGGGGAGGCCCCCAGGGAGGGAGGGACCCAGAATGAGAAGCTTGGGGTCCACTGTAAGGCTCTGGGGAGCCCTGGAAGTTTTGAGCCAGTGACACGGATCCCTTCTTTGGAAGGAAAGCAGTGCCATAAGGGGCAGGGGGCCAGGGAGAGGGTAGATTAGATGGGGTGCCTCCCTCTAAGGATCCCCAAAGCCTGAAGGACAAGGCTCCCAGGAGTTGGTGCCAGGCTTGAGGAAGACACAGCCCTCTTCCCACCTCCCACAGCAGGGAGCAGGCAGGAGAAGGGCCTGCCTCCCATTCTGTAAGCGATACCTCCCATTCTGTAAGAGATAAAGACCTCTGACCCCACCCCAGGCTCTCCAGGGAGCCAAGCCTCACCTTAGCATGGGGGGTAGGGTTAGGGATGGGCCGAGCTTGAGCTACAATGACCTCTCATCTGACCCTGACCCTTTTCTCTTCCTTGGGGCCCCATAGCTGCCCCCGTCCCTCAGGGCCCCGAGTGAAGGCTGTGAAGCTACTGATTGTGGAGGTCACCCCAAGACCTGTGTCTCTATCACAAATGTCCCCTGCCCCTAAAAGGCCCACAGGAGCCAAGGTCAGGGGACACATCCTGGAGGCCCACCCCCCTAGATGCCCCCACCTCATCCCCACCTGGACCCTGCTTCCTGCAGGGGTACCTGTTGCTGGGAGGCATACCTGGTCCCCAGCTCCACTGGGCTCGCCTTCCTCAGTTTCTCCCTTAGGGCCTGCAGGGTCTTCCTGGCTCTGGGCCCCTTCCCCAACCTCCAGTCCCCAGGAAGCTCCTCCCCAATCCTCTGCCTGGGGAGCCACATTCCGAGCATAACTGAGACAGGTATGTGTCCCTCCCTCTGCACCACTTGTGGGTGAAGGAGACTGCGGGTTTGCTCCAGGAAGGAAGGAGACCCTCACGCCCTGCTTTGTCAGGGAAGTGGCCTGGCCTCTTCCAGTGCCAGCTGCCCACGCATCATGAGCTGCCCAGGCTGGCAGCTGAGCGGGCATCTCCTCCAGCCTTTGGCCACTATACCCTGGTCTGGACTTGTACACTTGTACACTCCCACCACCCTCCTCTCCCCCACCTAATAAAGACTGGTCCTTGGGCCCCCCTGAATTCCCTAGGAGGGATGCAGGCTTGGGGTCCTTCCCCAGGCCTTTCCCTCCCGAACTCCGAGCCAAGAGCAGAGAAAGGAAGTGTTGTCTGCCCTCTCCGGGCCTGGCACAGGAACAGGGTCGGAGAGTCTGGCATTAGTCCAGCCCAGCCCTGCCCAGTCCTGAAGCCGGGGGTCCTGGTGGCCACAGCCTAGACTGGCCTGCCTGATTCCAGTGAGCACCCTCCCTTCCTCCCTGCCACGCTAGCCTTTGGGCCTTCACGCCAGTCTTGGGCCTTTGGGGAAGGTAGTCCTAGGCTATATCTCAGGCTAGAGAGATGCTGGGTCCCGGGCCGCCGGCCTTGGCCTTGGTGCAGGCCCTGTGGCCTGGGAGCCGGATGTGGACACAGACACCCCCAGACAGGGACTGGCTCCGCAGAGCAAAGCGGGGCAGGTAGGAGCCCAGGGCAGGTTCCAGGGCTGGCTTCCTCAGGGCTAGAGCTGGCTCCCTCTGCTGTCTGGCATTTAGCTTCTGTACCCCCAAGTCCTGAGCCCGCCCTACTCCCCCACATTCCTCCCTGCCGAGGGGGGAGGTGGCTTCTTCCTGTCCCTGTTTCCCTCTTCCAGACGTAAGTTCTCACCCCACCCCCTCCAGACCCGCCCCAGTGCCGTCCTCAGCCCCTCCCCCAGGCAGGTCCTTGGAGCTGGGGCAGGCCCAGGCTGGAGGCTGCGCGCCTGGGCTTTCTCCTTCCTTCCAGCCACTGGGGGCGGGGCATCTGCTCAGGTGGAGCGTGGCCTGCTCCTGCACTGTCCTCTCTCACCTAGGGTCCCCGGTAGGAAGTCTCCGAGAGCATGGGCTTGTGGGACCACAGCGGGCTGGCTGATACCCTCACTGGGGCGGCCCCAGGAGCTTGGGGCGTGGTGGGGGGTGGGGAGGGGGTTGCTGCTGAAATCAAAGGGCATTGGATCCATCACTTCAAGGCAGTGCGCTCCTTTCCCGCAGGCCTGAGCTGGTGGAAACAGCTCCTGACTTTTTCCAGACCCCACCCCATCACCCTGCTCCCCACCCAGAGAAGAGCCCCCGCCTCCATACTCCCCAGCAGATTGGAAATGGAAAAAAAAAAAAGTTGTTTTGAAACTGTCCTCTCCCCTGCTGTCTGTACCTGCCTTCCGCAGGGCTCTGGACAGAGTAGATTCCAGTGGGGCCTGCCTGTGGAAGGAAGGCAGAGCCATGGAGGTGCTCGCAGCCTCTCTGGGGTGCTGGGAAGAACTGGATCGCCTGGTCAGGGCTAGCTGGTCTGGATCTGGGGCTCTAGCCCCCTGCCCCACCAATCCTTTCAGACTGAGGTAGGGAGAGTGCAGAGGGTGGGATGGGGCTGCCCCAGGTAAGGTTAGCAGGGGCGTGAGCCCAGACTTCAGGGTTGTAGATCTAGCCAACTGTTGCTTGCCCTGCACAGCCTCCTCCAGCCTGTTTTGCTTCCTTCTTAAAGGGTTAATCCCCCAATCCCCTGAGAATCAAAGCCTGCCCCCACCCCATCACCACAGTGGGGTGGAAGACAGCTGCTGAAATTGACCTCTCTCCTGCCCCTGCCCCCCAAGTCCTTTGCCTTCACCAGAAGGCCCAGGCCAGCTGCCCTCCCTCCCAGCCCAGAGGCCTGAACTGCTCTGCTGGCCCCAGCAACCCCCTCAGCATTGGGATAGGGGAACTGTGGCTCCCCACACAGGCCCCTGAGGCCCAGCCCAGCAAGCTGGGGGCTGCAGGCACAATCCCTGAAGTAGCCCCAATAGCACTTAACACTCCAGAGTCCCAGGAAGCGCCCACCTCTCACAAAGAGAAAAAGGGATCTCAGAAATGAGAGTTAGTGACAGCTACCCTGATGAGATTGACCCAGCTCATCAGAGAGTACTGTGTCCCCATAGGCTACAGGGGGCTCAGGAGGGATCTGGGCCCTATTCTAGGCTGTGGCTGGGAACCGGGGAGGGGTGACCTGGCCTCTGGTGGAGCTTCCAATGGGGAGGGAAGCTCCCCTCAAAGGGGCCTCTCCCTCCAGAGCAGATCCTGAGAACTTCCTCTGAGGAAGGCCCCCTGCTAGGGGCTGCTTACAGCTGGACCTGGGAAGGGGAAGATGGTCCCTCCCACCTCCCCTCCCACTGAGGCATGGGAGGGGCAAGCTCTCTTTCCTCACAGGCAGCCGGCTGTTTCCAGCTGTGTGGCCTGCACATGTGTGTGTGTGTACATTTGTATGCACGTGTGCCTGCAACCTCAGGTGTACCAACCACCACACAACAGTTCTGGTTGAAACTCCAGCTGGTGGCCTGTGGTTCCTGCCACCCTTGTATCGCAGGACTCAGCCTGGGGAGGGGACCCTGCAGATGCTCTGCCAATGGGATGGTAGCCGGCAACCTTGGCTTGTGTCCCAGAGTTCTGGGAACAGGGCTGTGGGCCCTCTGTGGGTGCCGTCTCCTGCCTGCTGCCCCAGTGTCCAGCTGTGCTCCCCTCCCACCACCCCATCCCCGGCAGAGAGCTGGGCCCCTGCTCCTGTGGGCTCTGCCGCTGGGTTTCTCAATGCCAGAGATGGAAGGGCTGCATTGAACAGGAAGAGTCCCTGGGATCACTTGGGTTCCCTGTCCCCTCACGCCTGCTGGACCCTGTGTCTGGCTAAGTTAGGGAGCAGGGCAGGTCAGGAGAGGTGGGTCTGCCTTTGATGTGAGGTGGGCCTGAAGCTCCCTACCTCTCCTCTTAGCAACTTCCTCTGCACTGCCCCCTCTGCATACCAGGCCCAGAAGCAGGCAACCTGTTGTGGCTCCCTGAGGCACCTGTCCCTCTGGCAACAGGTACATGATTTCTATGTACATTGGGGAGAAATAAAGGCACAACATCTGGGCCAGATTATGGCCTGTCCTGACCCACAAGTGGGGAAAGGATGTATGTCCACCCCTGTTCCTAGAGGGGGGGAAGTGAAGCTTGCTAGAGTCCACTCGTGAATCCAGCCATCAGTTCCTTCCTCACCCACCCGTCCACGCAGGACCTAGCAGCAGGCCCTCACAGGACCACTAGAAGGGCTGCTGCAGCTACCCACGCGGCTCTCTCCTGTCTGGTCGGTCTTTCTGTCCCTTTGTTCCCAGCTTCTCTTGGTTCCAATGTTGTAGCCATGCGTTCTGGGAAACACACTCACTCAGAAGCACAATGCAAATAACGGAGTGCAGTTTATTACACCGGCGGGCCCAAGGCAGAGTCTCCTCTTAGCCAAGGACCCCGACCAGTTTTTCTGAAAACCTTATATACCCTAAGTGTACGTGCCCAAACCCACCTCCCCAAATTCCCTGAAACTAGTCTGAACAGAGGAAAAGAAAGATACAGTCAAAGTTAACCTGTGATTCATATGCCTTAAGCCTAGGTAGTTAACAGTGGACCATTATTAATAGGCCTGTGATCATACCCCAATAAGCATAATAGAATTTATGATTCTATGCGGTTACACAGATAATTAGGGTATTCTTTAGGTAACAGAGAGTCTAGGAACGAGCCCTGGGGCTCTTCCATCCGGAGGGGTCTGGTTTTCCAGTTGGTGTGTCGTTTCCATAGATACTGGGCATATAGCTCAAAGTCCACAGTCCGGCCCAAGATGGAGTCCTGCTTTCAAGATGGAGCCTGGTCTGTCTGTTTCCTCCTTCATCCCTCCTCTTCATGCTCTTAACTCATAGTATGAGCATCATTCATAGGGATTTATTGCACCCTGACTCTCCGACCTCCAATTTGGGAGAACGACATCAACCTTTGGGTTACAGAGTTCATAATACATTGTAAAATAAAGGGTCCACAAAGCAGAACTATGAAGGCAACTATAACAATGGTAAATATAGTTTTCCACCAATCACCCTTCACCCAACATAGGACCGAAGTCCAAAAAGGAAGATGTATCAGACATAACTTTTACCTGACCTTTCATGTCATCTAGGGTAGCTGATCTATAGCCAGATAAATCAGGAATATACACACAACATTCAACTTTAATTATAGCACAGGTCCCTCTTTGTACTGAAACTGTGGTCAATCTCAAGATGATAGCAGCAAGTCCTTGTAGCAGCAGTTGATTGTAGAGCTTCATCTCTGTTTCTTCTTTAAGATGATCTTGGTTTCATGGGGATCAGAGGGGTCCCTCTGCACAGTCCACTCGGCGTCCTCCGGGTCTGCATGGTATGCTCTCTTCAGCCTCATGTGGAGGATCCAGGGAGTGACACCTGCAACTTTAACTGCAGTAGGGCTGGTTAGAACAACAGCATATGGACCCTTCCAATGTGGGGCCAAGGAGTCGTGTTTCCAGTCCTTGACCACACCCGATCCCTGGGCACAAATTCGTGAATCTGTTCCCCAAGGGGGAACGGCACCTTTTCTTGTACAAACTTAGTTACCTGATTTATTACCTTACCCAGTTGTTCCATCTGCTGTGAAATCTCATCTCCCCTTACCTGAGGCAAATTTGTTGACACCTGTTTTATTATGGGAGGGGGCCTCCCATACACAATTTTGTACAGAGACGATTCATGGGACTGTGGGGTCATCCTGAGTCTGAGCAGACCCGTCAGAAACAAGTCCACCCAGGAACCGTCAGTCTCCAAGATCCACTTGGAGAGTGTCTCTAAGTGTCCGGCTGGTTCCTTCCACCATCCCAGAACTCTGGGGCCTATATGCTGTATGTAATTTCCACTTGATGTTTAAAGTTTTGCTTACTTGGTTATACTAAAACAGCTACAAAAGCCGGGCCATTGTCCGATCCAATGCTGGTAGGAAATCCAAATCTGGGAACTATCTCCCTAAGCAGGCACCGGGCTACTTTTGATGCTCTTTCAGTGAGGGTAGGAAAAGCTTCTACCCATCCTGAGAACGTACATACTGTGACCAGCAGGTAATGGTAGTGTCCGTGAGGTTTCATTTCAGGGAAGTCCACTTCCAGGTGTTCAAAGGGCAGCGTGCCTTTTACCTGAATCCCTGCAGGTTTCTGTCTGTGCCAACAGGCAGCATTGGCCTGTAAGCAGGCAGTGCAGTTCTGAGATTTTGTCCTGCATGGGGAAGAGAGGAGGGGAACAAAGAAATAGTTTCAAATTATCTCTTCCAGTTTATCATGGCATAGATGGGTCGCTTGGTGTGTTTGGCTTACCAGAGTGGGTGCCAGCTCCTCCGGTACCCATAATTTGCCACTTGGCAATTCCCACTATCCCTTTTCAGTCTTGATGGCCCCTTCTGCTTTGGCTAGTTGGTTTTGAGCTTCAGTGTATTTTGGAGAGTCTAGTGTTAGCTCAGGTAGCTCCGCCAATATGAAAGCTTTAACAGGGGCTTCACTTGTCACCCCCAAGCCCTTGGCTGCTTGTTTAGCGGTCTTATCTGCCAGTCTGTTCCCTGAGCCCGGGGAGTATCCTCTTTTTGACGTTCTCAGCAGTGTATGACTGCAATCCTTTCTGGTTCCCAGGCAGCATCTAATAGGGTCTTAATTTCTTCCTTATTTTTTATCTTTTTCACTAGCTGTCAAAGGCCTCTCTCCTTATACAGAGCCCTGTAGTGTGGCAAAAGCATACCTGGAGTCTGTGTCAAGGTTTGTCTTCTTACCTTTTGACAGCTGGAGGGCCTGGATTAGAGCATATAGTTCAGCCTGTTGAATGGAGCAGTGTGGTGGCAGAGAGGGAGCCTCAACAATGGTTTCTTCTGTGACCACTGCATATCCTGACAGTCATTGTCCTTGTTTCACCAGGCTGGTGCTATTGGTGTACACGACCGAATCTGGGTCCGGGATTGGCTGGTCTCTCAAGTCAGGTCTGCTGGCATATTTCCTTGCGATCATGTGAGGGCCCACCTTCTCCCACAGGAAGGAGAGTGGCCAGATTCAGGGCCTGACAAGGCTCAGTAGTAACATGGGGGTTCTCACATAACAGTCCCTGGTACTGAGTAATCTGGGATGTTGACAGCCATTTATGGAGGTCCCCTTGCAGGAGAGTGTTGACCTCATGTGGGACTTTTACAAACAAATCTTGGCCCAAAGTCAGCTTGGTTGCATCCTGGACCAGTAAGGCAACTGCCTGTAAGCATCCCAGCCACCCAGTAGCAACACTGTCCAGCTGATTAGAGGTAAGTCACAGGTCTGTCCCATGTCCCCATAGTCTGGGACAACACTCCTATAGCCACCTTGTCCTTTTCAGTCATGTAAAGAGTAAATGGCTTAGCAAGGTCTGGCAGGCCCAAGGCGGGTGCTGATGTAACTGTACTGGGTTTGAGTTTTATTACCACTGGGACTTGTTTTGCAAGCCTGGGGGGGTTGTCTTCTGCCCAGACCTCAGGGAATTGTTGAGTTAACTCTCTCTCTTGACCATTGAGCCTGTCCGGTTTCCCTTCTGGGAGATCGTGCAATCTCCCTTCATCTTGAGGGGTTACTGAGAGGAAGAGTAAATAGGTGGTTAAGCCCACTCGAACAGTGGGTCTTTCTTGGGGAGACAGTGACTTGTTCCCCCAATTTAGACAGCAAGTCTCTTCCTAACAAAGGTACTGGGCATTCAGGGATGTATAAAAACTCATGAGTCACTTGGTGTCCCCCCATCTGACATTTTCAGGGTAGGCTAGAGACACAAGGCTGCATTTATCACCATCTGAGACCCAGCAGCCTCTGGCTGGGTCTATTGGCGTATAAAGTCTATAGGCCTCGCATAGTCTTTCGCAGAACTCAGGGTGATTCGCTTTCCCTTTGAATCACTTCAGAGGGTTTTGTGATACTTATAGCTTTTCGGGCCCCCCTCTTGAGACCTTGTAAAATAGCCACCCGATAACTCTCCAGGTGGCCCCTCCCTTCCTCTGTGTTACAGTCCCAGTTGGGCCTCTCATCCGGGGTGGCTAGTTCTGCCCACCGCTGCGGGTTTGCGGTACCCTCAGGTGCCATTTCGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGACGGAGGAGCCTGGTGGGCTACAGTCCATGGGGTCGCTAAGAGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGCAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTCTGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGCAGCAGTAGCAGCAGCAGCAGGTGCTATTTTTCTTAACCATTTTCTGGCCTCAGTTAGGATCCTGTGTCTTTCCTCAGTGCTGAAAAGGGAGACTAGTAGTTGGATTATGTCATCCTATGTAGGGCGGTGGGTTCGAAAAATAGTCTCTAATAGCCTAATCACGGCTTGTGCTCCCCGGAGTATGGTGGAGTGTGTCTCTGCCAGTTTAATATATTCGTAGAGGAAAATGGCTAGTAATAATAGGCTACAGGGGCTGATGGTAGTGCCCCATGTGTCCTGAACTGGAGGCTGTTGTAGCTTTCTAAGGGGCATCTGTAGTGGGGTTCTTTCCCCCTGTTCCTTGGTGGAGTGCAGCCTCTGTCTAATTGCTGTGTTTTGTTCCCCCTTCCCATCAGTACTCACCGGGAGAGGTGGATACAATCTAGGAGGTCCAGCTGAGGTGGAATTCTGGGGACATTGACCAGAGGTCTCCATTGCTGGGATTGGAGCCTGCCGAAACGGCAGCTCTACGAACTCCGGGAGAGCTGGTGGAAGAGCAGTGGCTGCTGCAGGAACTTCACCTGGCCCTGGATGGGGCAGTAAGGTGGCCTCCGGTCCTGGTGGAGCACTGGGAGGCAGGCGTGTCATTATCCAGTATGGGGGAGGGGTCAGGTCATTTCCGTCCAAATCCTGTAAAATTTCCTTTTTTATCATCAGTCAATTTTTGTGCCATTAATATTTTCCCCTTTCCCTTCTGGATACAGAACCTTGTCCAAGTAGGAGGGTCTTGAGCTAACCCTAGCCATGAGTCAATATATGGATATTGATCCAGGTGTCCGGGCTCTCCTGTGATTACTGTATAGACGGCTTCCACTATTTTTAAGTTCATGGTGTTCTCTGGTGGCCATCCTACTCCCATAGGGGGCCATTCGACCTCACAGAGTATGTGGAGGCGGTTAGGCTTCATCTTCACCCCGTTCAGTTCAGTTCAGTTGCTCAGTCGTGTCCAACTCTTTGCGACCCCATGAATTGCAGCATGCCAGGCCTCCCTGTCCATCACCAACTCCTGGAGTTCACTCAAACTCACCTCCATCAAGTTGGTGATGCCATCCAGCCATCTCATCCTCTGTCATCCCCTTCTCCTCCTGCCCCCAGTCCCTCCCAGCATCAGAGTCTTTTCCAGTGAGTGAACTCTTTGCATGAGGTGGCCAGTCTCCTCCAAATCCCTTCTTTAAATTTTTAATCATGCACTCCAATACAGTTGCCTTAGATTCACTTCCCCTCATCTTGCTTACCTTCTCGGACCTTCTACTTTTCCTTTCGTTCTGTCTACGAAGTTCTCAGTACCCTATGTACTTCTGATATTTCCACTCAATGACACTTAAATTGCCATTCTGCCACCTTCCTAATAGGGGTGAGAAGAGCCTTACCTGCCAGATCCCAGAGGGAGAAGGGGGATTGGCATGTCTTCACCTGCCGGTCAGCACAACCAAACCAGACCACCACGTGATCCAAGATTGTTTCTCCCTTAACTTTTAAAGTCCATTCTGCCTCGGTGGGCTTGATCAGGTGCGGATGAAAATACAGATGGGTTAAATATCCCATGTCCCAGGCCATCTCTGGAAAAGCCAATTCGTACTCACTTATGTATCCCCCTCCTATCCTGAGAATTCCGAGGGGGTCAAGAATTTCATAGCAGATGGGACATCTCCTTGGGGAGGGCAGAATACGAGCACACAGAAACCAAGTTTCTTCTCCTAAAAATCCCCTGGCAATTGCTTGGTAATAATTTTCCCCAAGATGGCATGGACACCACCTCCTAAATGACCTTCACAAGTTTCCTTCCTAAGCCCTAACACACTCATCAACCTGTGTACCAAGCAATCGTTGCCACCTGCCTATTCCAGGCTCCTGTGGGTCTGTGCCCCTTCTAGTCCCTCCCAGGGCGGTGATCAGGCCCCCTCTTCCACCTTGCTGGGTGGGTTCCTCCTCACCTGAGCACTCAGTTCCCCTGCTGCCATCCACTACCTGCTAACATGAAAGGTCCGGGCATTGAGAAGCAGAATCCTTCCAGAAGGGCGAGGTGCCTTCCCCCCTCTAGAAGATTTGAGCCACAAGGCCTCAGAGTAGTCCCAAATGGGACTTGTCTCCTCAAAGTGAGGAGTTTCCCGGCCAACGCACCAAATGTTGTAGCCACACGTTCTGGGAAACAAACTCACTCAGAAGGACAATGCAGATAGTGGAGTGCAGTTTATTACACCAGCGGGCCCAAGGCAGAGTCTCCTCTTAGCCAAGGACCCCGACCAGTTTTTCTGAAAACCTTATATACCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTACTCTTGCCTGGAGAATTCCATGGAGGGAGGATCCTGGTAGGCTACAGTCCATAGGGTCGCAAAGAGTCAGACACAACTGAGCGACTTCACTATATACCCTAAGTGTATGTGCCCAAACCCACCTCCTCAAATTCCCTGAAACTAGTCTGAACAAAGGAAAAGAAAGATACAATCAAAGTTAACCCTTGATTCATATGCCTTAAGCCTAGGTAGTTAACAGTGGACAATTATCAATAGCCCTGTGGCATACCCCAATAAGCATAATAGAATTTATGATTTTATTTGGTTACACAGATAATTAGGGTATTTTAGGTAACAGAGAGTCTAGGAACGAGCCCTGGGACTCTTCCATCCGGGGGGTCTGGTTTTCCAGTTGGTGTGTCGTTTCCATAGATACTGGGCATATAGCTCAGAGTCCACAGTCCAGCCCAAGATGGAGTCCTGCTTTCAAGATGGAGCCTGGTCTGTCTGTTTCCTCCTTCACCAATAGGTGTCTGTCTGCCACTCCTCTTCATCTTGACATCCAGCTGGTCAATACCTCCAAGAAGCACCGCCCCCCAACTCAGACCTTTGTGCTGGACTGTGCATCTCTCTTGGCCTGGCCATGGCCCTCAGCAGGAATACAGGGTCTCCTGACTCACCGGCACTGACCACACCTGGGTGCCACCCTGGCTCCTCCAGCTTTCTGTTTCCTCCTAGACATGGGCAGGACCTGGCCGAAAGAGATGGATTTGGGGCTGTCCTAGAGGGGAGGGACAGAAGGTATGGATCAGCTAGCTCCACCCCATCCCCTACCTCAGGGGTCCCCAACCCTGAGGCCATGGACCGCTACTGGTCAGTGGCCTGTTAGGATTCAGACCACACAGCAAGAGGTGAGGGGTCGGAGTGCTGGTGAACAAGCGAAATTTCATCTGTGTTTACAGCTGCTCCCCATTTTGGCATTACCAGCTGAGCTTTGCCTCCTGTGAGATCAGTGGCGGCATAATGAACGTAATGCGTCTGAATCATCCCCAAGCCTCTCCCCACCCAACTCCAAATTCGTGGAAAAACTGTCTTCCACAAAACTGGTCTCTGGTACCAAAAAGGTTGGGGACAGCTGCCCTACCTTTGATTTCCCTGGTGGCTCAGACGTATCTGCCTACAATGTGGCAGTCCTGGGTTCGATCCCTGGGTCGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCATTCCAGTACCCTTGCCTGGAGAATCCCATGGATGGAGGAGCCTGGTGGGCTCTACCTTTTCTCCAGGTGTCTACTACCCCCTCCTCTGTTCGGCTGGCGCCCCCTGGTGGCTGAAGCCTGTCTTGGCAGGCGTCCCGGCCCTGGGTTCCCCAGGCCTGCGGGTCTGGCCTTGGCCCTTGTTTCCCTGAGACCTCACCAGGCTGGCTTCTCCTGGTCTCGTGCAGTCTCCTGAGCTTGTTTTTACTGGGCCTCTGTAGTTGGCTCTGCCTGGATGTGCAAATCCCTCGACCCCATCCTTCGGGTCTCTGTACAGTCATCCCCCACGTAGATGCTGCGATCTAGGGCAATCTCTGCTACAGGGTAACCTTCCAGGGGCAAAGAGCTCACCCGACTCGGCACCTGCCTCCTGCACTGAGCCCACCCCCGGAGGAGTTTGGCCGGGGCCGGGCAGGATGAATGCTGAGTAATGAAGGAGGAGGGGTGCCGGGGTCAGCGGCCGCTGCCCTGCGACCCAGCCCCAATTCTTCCACAAGCTCTCACTTAATGCCACCTCCCGACAGCGCGGGCTAACCAGCAGTGTGGGCCCTGCCCGGGGCTCGTGGGTGGGCATACAGCCCGCGGACTCAAGTGGGCCCCTCCCGGCCTTAGCCTCACCTGAGGGGGCGATCGGGGCCGGGCTGCACGCCGCCTCCTTCCCAGCGGTTGGCCCCAGTCCAACAGCGACGTCCCGCTGTGAAACGCCCATTGTCTGCTGAGGCCGAGGGGGAGGGGATGGCCCTGAGACCCGACTCTAGGAGGCTGGGGGAGGGGGCCGCCCTGCCCCATCCTCTTCCCCTCCCCCGCCAGGGCGGCCAGACACCTGTGGCTGGAGGCCGCCTGGCACTCGACTGTTGGATACACTTTACACACTAGCGGGGTACCCTCGAGGGCCCAGGAGTGGAGACTGGCGGAGGTCCCCACAGCAAAGGTGTGTGCGCATGCGTAGAGTGTGTCTGCTGCCGGGAGGGCGGTGCCACCCCACTCCCACCCCATCCTTTTGGAGCGCGCCGGCCCCTCCCCTACAGAGCGAAAGGGATCAGAGGGAGGCCAGTAGGTGGGACTTCATATTCTCTGTGGACTTCGTTCCCGGTCTTCCTCGCAGGGCAAGGGAAGCGTCTGGAGGGGCCCAACCACACGCGTGTATGTGGGGGTACACCCGATGTGTGCTGTGTGGATGAGGGGCAAATTTTGCATTGCATGAAGGTGTGCAGTGTGTATGCACACAGGTGTGTGTGTGACTGCACAGTGCCTGTGCAGACTTGAGTGAGTGGTTGTACGTATGTCCGCATATGGGAGACCTGGAACATGGAGTGTGTGTGTACACGTGAGCAGTAGCATGTTGCTGTGTTTAAGCCTGGAGAGGGTCTGATTCTTGGCTTGGTTTATCCTCTCTTCCCGGGACCTAGCCTGCGTGGGCCGGTCAAGGCTGAATGACTTTGAGTCTGGAGATCCCAAAATAGCCGGAGTAGCCTGAGCCCCCCTCCCCCTCGACTGGATCTGAGGCCTCAATGGCCCTTTGTCTCTCTGAAGGCATCCAACCCCTGTAGGGGCTCAGACTGGAGCTGAAAGGGACCAGGCTGCATGTGGTTGCCTTTACCCCAGGCCAAGCCCGACAGGGCACCCAGCACCACCACCATGGGAGCATCTAAGGCCAGCCCATTTGCGGGCAGATTCCAGGATCTCTGCCTGGGGGAGGCTTCCCCGCTCCCGCCCCCCCATCCCAGGCCTTACCCCTCCCACATTCTGGTTCCCTCCCATGGCCCACCCATGATGCTCCACAGCTGCAGTGGCAGCAGCAAATAGGGCTCCTGTACAGGCATGTGTTCAGTGGGCAAGTCCATGGTTTAACTCGTAGCACTGACTGTGGACCCCTCCCCAAATCAAGGGATCAGATTGCAGTCCTAGGGGGGCTGCAGTGAAAAGTAAACGGGAAATGTGTCACTGCCTGAACTCACCACACCATGTTCTGGGCTCTGGGCCAAGCCCTGCCTGGAGGAGATAAAAAGTCAGACCCTGCCCTGGGTGCTCCCAGTCTGGGGCACCGCCAGTATCAGTGTGGTGTGGGCAGTGCCAGGGTGAGGTGAGAGGGTGGGAGGCCCCTCTGAGGAGAGAGTGAGGACAGCCAAGAGCAGGGTCTCCAAGTAGCCTGACTGATTGCTGCTCTGGGTGCATTGTCGCTCTTTGTGTATTGGCTTTTCCTGCAAGTTTCAGTAGAACCCTAGGTTCCAGGGCTTCTCTGCCGTGGGTGATGGGGGACCCGGACAGGGTGGGCTGACCCCGCTGGGGTTTGGCAGCAGTGTGCCGGGCCGTGGGACGGAAAGGAGTCCAAGGAGATGGACCTGACAGAACTGAGAGCTAGCTGGCAGGTGGTTGTCCCAGCCGAGGATGGTTGGGGGGTGTGAAGACCCCACCTGACGAGGAGGGAGTGAGCGGGGTGTGTGTGGGAGAACTCCAGGGACGTGATCGTGAGGCGACTGGACACGTGGTGGGGAGGACGCGAGTGCCAGGTGGGCTGCGCGCCCTGGCCCGCTGTGACGTCACGGTCCCGACTTTCCTGGACTGCCTCTGGGGGGCGCTCCGGGCCTGGGACCGGGCTTGGAGCCCCGGCTATTTGCATAACGCTTATTTACATGGGACTCATTTGCATGATCCTCTTTCCTTGCGGACTCAAGTTGGGAGTGCGGGGATAATTTGAGGTGCTGATGTCAGTTCCTAGGGTGGGGTGGCCCACCCTCTGAATTGAACCCAGCCCAATTCCCACCTGTGTATATGTACTTGGAGATGCTACCCCCACAGTACCAGGGTGGGGCCAGCAGAAGCAGAGACATTGACACGCACCCGCGGTGACACGCAGCCTGCAGCCCAGAATCGGGTCTTTGGTGCAGGCCGAGCCCCGCTGCGGGGACTCAGACAGACACTCCGCCGCGCCGTCACTCACACGCACAAGACAGCCCAACCGGTTGGGAGCGGGAGGGAACCCGTCCCTGTCCCGCCCCACTCTCGCCCACCTACTCGCACCCTCTCTGCAACCCCCCCACCCCACCCCCACACCTGTGTCTCCAGCTCCAGCCTCCACTCCCTTTCATCTCCCACCCCGACCCCCGGCTCCCCAGCCCGACCCTGCACCCTCCATAGCCTCAGCGCCCCACCTCTGCGCCCTCCCCGGACCCTGCTCCCTTCCAGCTCCGGTCCCCACAGCCGCCCCCCAGCACTCCCAGCCCATGCGTTCCCTTTTGTGCCGCCGCCTTCCAGTCCTCATCCGCCCCATCCTTCTTGCGGCGCAAGCCGCGACTCCCCGCGGACGCTGGGGTCCCCGGAGGCGTCTTCCTTTGTCTCTGCTCCCCGCCCTCGCTCAGCGGCGCCCCTCGCCCCACACTCACCGCCTCAGCCCCGGCCTGGGCGCGGGGAGCGGGCGCGGCCCTCGGCAGCCGGCTCTTTCTTCTCTCCGGACGCGCGCTCGCTCCTCCCGCTCGCTGCCGTCGCCGCTCCCGCCTCTGCTGGGGACTGAGCAGCTGGGACCCGCCGCCCCGCGCCTAGCTGAGTCCTGGGCGAAGGGCCGATCGCCGCTAGTCCCTCTCGGACCAGCCTCTCCCAGGCTGCCGGGCCGGCAGGATCCGGGGCTGTGGGACTACCGAGGCTGGCTCTGGGAAGACTGAGCACAGCTGGAGCCCGGCCGAGAGCTGCCAGAGCCTCTGGCCCAGGCCCTGACCGGTGTGGACAGCAGGGGTGGTGCTGGCCCTTGGTTGTTCCTCCGCCTCCCTCCGAGTCCAATTTTGGGATTCTGCTCCAGGAGAATTCTGCACACCCATTATGAGCCTCAAGGGCTGTGGAGGGGGCTGGTGCTTCCCACTCCCTGGCTGTGACTGGAGCTGAGCTTTGAGAATAGAGCGGCTGTCAACTGCCCCAGGGGTCCAAGAATGGAGAGAGTGGCACGGAAGAGGCCCAAGGGCACCCCGTGAGAAGCCCCACACCTCAAGAGTGGGGGCTGAGGAGCCTGGGTCATGCCTCCACTGCTGCTGGAGCGGGACCGCCGGCAGCGGCACGGGGTCTCCGTCCTGGTGCGGTATTTCATGATCCCGTGTAACGTCTGCTTGATCCTCCTGGCCACGGCCACGCTTGGCTTCGCGGTGCTACTCTTCCTCAACAACTGTATGTGTCTGCGGGTGTGACTGCCTCTTGGACCCAAGTGACCCTGCCTCTGCTGGCTGAGGTCCCCTTCCTCAGCCCAAAGATTAGGGGACAGGCAGGGTTACGGACAGGCCATTAGCTGCATCTTCTTGGAAGACCATGGGTTGTTTTCTGAATGCCTGAGTCCCCAGAAGCCTGTCCATGGGCTAGGGGGATGGGTGGGAGGATGGTGGCCAGCTCTCATCCTGAGCTGCATTGACAACTTTCTTTGGGATCTGGGGAGTTGGGGCAGCTGGTTACACTGGGAATAGGGGCTTTGGAAGGGCTTGGGGCTCATCTAAGGAATAGGTGGCGCCTACACCTCTGCCACTGGGCCTTCCTGACAGGTGTCAGGCCAGGATGATACAGCTGGAGGGGCAGAGAAGAGCCAAGGCCTCTGTCTGTCTACTGCCGGCCTTGGCCAGTCTTCATGACTCTGAGTAGAGCCAGGGGAGGGATGTGTGCAGGCAAAGGTGACAACCACCAGGTTGGACAATGGAACAGGCTAGGGAAGGACTGGCTCAGGGGGAGCTAACTTGAGATTTGTTTTTTTTCCAG
Seq C2 exon
ACAAACCTGGGACCCACTTCACGCCAGTGCCCCCAACACCTCCGGATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000013191:ENSBTAT00000017563:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.471
Domain overlap (PFAM):
C1:
PF0314610=NtA=FE(68.0=100)
A:
NA
C2:
PF0314610=NtA=PD(1.6=11.8)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development