BtaINT0017956 @ bosTau6
Intron Retention
Gene
ENSBTAG00000019052 | ANK3
Description
Bos taurus ankyrin 3, node of Ranvier (ankyrin G) (ANK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001105620]
Coordinates
chr28:15864028-15876878:-
Coord C1 exon
chr28:15876797-15876878
Coord A exon
chr28:15864103-15876796
Coord C2 exon
chr28:15864028-15864102
Length
12694 bp
Sequences
Splice sites
5' ss Seq
TGAGTGAGT
5' ss Score
6.51
3' ss Seq
TAAGAAATTGTAAATCGTAGGTC
3' ss Score
3.04
Exon sequences
Seq C1 exon
ACCGAGAAAACGGATAGACGACAGAGTTTTGCATCGTTAGCTTTACGTAAGCGCTACAGCTACTTGACTGAGCCTGGAATGA
Seq A exon
GTGAGTTTCCTAACACATTTACTAATCTACGTGGATTTTTATAAGAAGAGACATTTTTTCTATACAAACAGAATTTTGGAGTCATGTGAAAGAAAACTCAATGGCAAAAGAAAACTGCCTACAGGAAAATTTTATCATGAGATCTAAGTAATATTTTGTACATAGTTGGAGATACAAGGTACAAACACCCCCAGATCATAGCTTATTAGCTTTTTTTTTTTTTTTAGAATTAGAAACATCTATCACTTGACTTTGAAAACCCTGATTTCACTTTGGTTGCTAACTATGTTAGGAGATAATAGTATACCAAGATTGGTTTATATCCATGCTAAAAAGAGAAAACATTTTCATACATGTCAGATAGTATAAAAGATGATAAAGTAACTCTGGTCATTATTTCATTTGCCTTAATATAGGTAGGTCATTCTAGCTTAGTCCTGATTCTTTTTTTCCCAGTTGGCAGGAATTAGATTTTCCTACCTTCGTGGGGTTGCATTTGTTTACTGATTTCTAATTCCTCCCACTCTCTCTCCCTCCCACCCTCTGCTCTTTATTAAATATCAACTCTAAGGTTGGGCTTTACTAGACCAGTTAAACCCTTTTCTTCTCACAGTAAATGTTCACTGTTAACTAGCTTGTAAGTATCAAGGCATCGATTCATCCAGTCATATTCATTCATTTTCTCCCTTTGTATTCCCTCCCCTCTCCTTCCCTCCTCCTTATGGTTATCACCTCCGGTGACCACAGCCCTCAAGATAACCCTCTCCACCAACAGGAACTAAGAGTGTGTTTGACTGATGTGGCATGGTGCCACTTTAACCATCAGAGGAGGATTTAGGCAAACATTATTTTTAAATTAGTGAATCATTTCTGGCTGCTTCCCATTACTCACAGTTACTTGAGTTCAAGGAGGACTGGAAATTTACCAGTAAGAACCACAACTGTTTTTTCCCAGCTTTCCTGAATTCTTGCTTCTGTGGGCCAACATAACATATTAAATACGCAGCAGGAAACTACTCTACTACTTCATTCAGGTGGTCTTAGCATAATCTTCTGGAATCTATCCCCTGGAGAGCTCTTACATTCAGACACAAAACAGGGAGTATAAGAGAAAGACAGGGAGTATAAGAGAAAGGAAACCCAACCACACTCATGAATGTTCTTCCAGATCTCTTTCTTCCCCTAGTATAACTGTCTAAATCTTTCCAAAACCGTAAGGGCTGAAATTAACTCTCATTATGCTATAAAGCAGGGAAGGTGTGTGTGTTTAACTAGATGTGTGTATAAATTTCCTGGATAGACGTTTTCCTTCAGATACTACTTTGCCTCAAAGCTAGGGCTTTCGTGGCACGGCTGTCTGGGACTCCCAAGCCACACCCTTAAGCTCTGGACAGGCTGCAGGTACTTGAGGTCAGGTACCTCTGGACAAGCTAGCTCCTGTCTGATTTTTGTGCCCTAAGGTGTTTGGGGAATATATGAGTTGTAAGGTCAGGTGCACGTGCTAACATCAATTGAATTTTTCCCACTTCTGAAACGGTTGCTACTTTTCAGTTAGCTTCATGAAGGTATATGTAGTTTGTCTTCCTTGACTTTTGATAGAAGGCAGAGGGTTCTCTCTTCTCTGTTTTATGAGAGGGAGCATATGGTGGACAGAAGAATGGGAAGGAGTAAGAAAGGACTAAAAGAAAAACTAGGGAAATGTTATGGCCCCTAAATTGGTGTTAGAAGAAGAAGTGAATGCAACTTTTCTCATAGTTCCCTGTCCTTTCCACCTACCCAACCCACCCAACCTCTTAAAAAAAAAAGGTTCTGGTATAATTAAGTGCTTGACATCCAGAATTCCCTTTGTTATAAGTGAAGACTGAAAGTCGCTCAGTTGTGTCCAACTCTTTGGACCCCCTGCCAGGCTCCTCTGACCATGGAATTCTCCAGGCCAGAATACTGGAGTGGGTAGCCATTTCCTTCTCTAGAGGATCTTCCCAACCCAGGGATCAAACCCAGGTCTCCCACATTGCAGGCGGATTCTTTACCATCTGAGCCACCAGGGAAGGCCTTTGTTATAAAGGGTATCACAAAATATGTATCATTAAAGCATAAAATATATAACTAATCAATAAATTGGCTGCTTTGTGCAAAGCATAAAACCATAGATGTGGTTCAGAAGACTTCTCTGCTTAGTGGAGCCAGACTTGAGTGGTAAAACAGAGATGCTCTGCCAGTTTCTGGTAGTTATAAAAATAAGTCCTTCCTTGAGACATTGAACTGAGCCCAAATCACTGAATTGAAGGAATCCTTAAACCATCCATTTGCAGTGTGGTATTCCCAAAAGAATTAAACACTACTGAGAATTATGACTAGGAGGGGTAATGAATGGGTGAGTTTTTCCTTAGTTCTTCCACTTCTCTTTAGAATAATATGTAAGCCTAGAAAAGGATATGTTCTGAATGTTTGAATTTAAATGTACACTAGGAATGAAAATCTTCACCCTTGTGGGAGTAGCTGCTAATCCAAGGACTGGATTGTAGTAATGGCACAAGCACAGCATGAAGAGGAACGTAAAGATGAAGCAGATTCTCATTTCCTCTTCGAGTTTCATTCCTAACTCTGAACCAGTGCTTTCTGGGAGCAAGACTGTACTCAACTTTGACATAGAACTTAACCCTTGGCAGGCGTTCCAAACCTCTGTGACCAGCTGGGTTTGTTTCTTAGAACTGTAGAAATAGAGAGGACTCGGTGTGTGCTTGCCATCCCCCAGCGAGTATGTGGACTTCATCTGTATGTTTCTTGTCCCATTGCCAGAAGATGCTGGTATTAAATTCATCTTTCCTAGTGGTAGGTCTGCCTCATGGCTTCTGCAGTGTTTGGGATGTCCTTGAGTTCCATGAATATTCTGGGAAGGCACCAGAATTGGCCCCTCTGTTATTGATTAAACATACATACAGATATATTCTGTATCCCACTATAGATACTTAAATATGGGGTGTTAAAAATATGACTATGCTTTTTAAATTTCCCCCATGATACCTTTTGAGAATTAAAAGTATAATGGATTATGAAAAATATCTGAGTGCTATGTGCTTTTTGTCCATAATAAAGACAAACCAGACATGGATACATTCTGTTGCAGAGGGATGTTTTCATATGCAGTATTAAATATTTTCATAAAAATCTCAAAAGGTACCAAGACTTAACATCTCATGGAAAAAGTGTACTCTTCTTTCTAAATGCTCTTGTGAAAGTATTTTTAAAGTTTGCACATTGTGCATAATATGGCATAAAAACTGTATTACTTCTTTGGCTCGTTTGCCATGATATATCGCGCATGAGAAAATGTTTTCAGTTGCTTTGCTTGCTTATGGTAACCATGAACCATATTTCTGGTTTTTTTCCCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACATGCATTCTAAAATCATTTCATATTATGTTTCTTTTTTTCTTCACCAAAAGGAATATACTGCATGGAAAAGATCAATGCAAACATTCCTTTTCTTTGTTTTTTTTTTTTCTTTTAAAATTCTGACTCAGAAAATTTCTTGCTCTTATTGGCTTTTTATGGGTGTGAAGCATAACCGAATTGTGCATGGAAGATGCAAATTTAAAATCCAGTGGCTTCACAGTTTGCACATCAGTTGCCTGTCACTTAAAAGTTATTTTGGATTCTGCATGAAATAGGCTTGAGTGGTTTTCTAAAATAACAGTTTTAGACATTTAATGTATAGCTATGCACATTGATATGGCTCTGAGTAGGTGGCATCTGTATCGCTGAGAGGTTCAAGGAGACGGAACATTAGAAATTACTGAAATGAGAGTTATATGGTTGTGCAGAACAAATATGTACCTATACAGGCAAAACAGAAAGGCTACTGATATTTCAAAACCAGCACATAAGAAAGTCAATAGGAAGTAAGCGAACAGTTTTCCATTGTGGTTATTTTTCTCATCATTAATTCTTTCCTCATGTTTTTTATTTTTCATCGTTGGCCTCTTGGTTGCAGTGTGCTTTTTCTGTCTTTCATTTCACATTGCTCTGTGTTTTATTTAGTTTTATTTTTAACCTTGGATTAGTTGCGTCTATAGAATTTTTTTTTCCCTCTTAATTGTTCCTTTTGCCTCTTCCATTCTGAATCATGCAAACAATTGTACTTGCTTTTGTAATATTTCAAAGTTTACTGACCAATTTTTTTCTCTGGTCTCTCTGTTTCTCAACCATTTTTGTTGATTTTTGTGTTTGATTTCATTTTAAAATTTAAGAAACAGTTGAACGGAGTGCAGGAGCAACAAGATCCCTCCCCACCACTTACTCATACAAGCCATTCTTTTCTACAAGACCCTACCAGTCCTGGACCACAGCTCCGATGACAGTGCCCGGGCCGGCCAAGTCAGGCTTCACTTCCTTGTCAAGTTCTTCCTCTAATACGCCATCAGCTTCCCCATTAAAATCAATATGGTCTGTTTCGACTCCTTCGCCAATCAAATCCACATTAGGCGCATCAACTACATCTTCGGTTAAATCCATTAGTGACGTGGCATCTCCGATTAGATCCTTTCGGACAATTTCTTCACCAATAAAAACAGTGGTGTCACAGTCTCCATACAATATCCAGGTTTCCTCTGGCACCCTGGTTAGAGCTCCCACAGTCACAGAGGCCTCACCTTTAAAGGGGCTGGCATCCACTTCTACATTTTCCTCTCGAACCTCCCCAGTGACTACCGCAGGATCTCTTTTGGAGAGGTCGTCAATTACTATGACACCCCCTGCTTCCCCCAAATCAAACATTAATATGTATTCTTCGAGTCTGCCATTTAAGTCAATTATCACATCAGCAGCACCGCTAATATCTTCACCTTTAAAGTCAGTGGTGTCTCCAGCTAAAGCAACAGCTGATGTCATTTCATCAGCTAAAGTTACCATGGCCTCTTCTCTTTCATCACCTGTGAAACAGATGCCCGGACATGCAGAGGTAGCATTAGTCAATGGATCTATTTCCCCTCTGAAATATCCATCATCTTCAACGTTAATTAATGGATGCAAAGCCACTGCCACATTACAGGAAAAAATTGCTACAGCCACAAACTCTGTGAGCTCTGTGGTTACCGCGGCCACTGATGCAGTTGAGAAAGTGTTCCCTTCCACTACAGCAATGCCATTTTCCCCACTCAGGTCTTATGTTTCTCCAGCACCATCAGCTTTTCAGTCTCTAAGAACTCCTTCTGCAAGTGCACTCTATACATCCCTTGGGTCATCAATATCTGCAACTACCTCATCTGTAACTTCATCGATAATAACAGTGCCAGTATACTCTGTAGTCAATGTTTTGCCAGAACCAGCATTAAAGAAACTTCCAGACTCTAATTCACTTACAAAATCAGCAGCAGCCTTGCTGTCGCCCATTAAAACATTGACTACGGAGACACGTCCTCAGCCCCATTTCAATCGAACTTCATCTCCAGTTAAATCATCTTTGTTCCTTGCACCATCTGCCCTTAAGCTATCTACACCATCTTCTCTATCTTCCAGTCAGGAGATATTAAAAGATGTGGCTGAAATGAAGGAGGACCTAATGCGGATGACTGCAATACTCCAAACAGATGTGCCTGAGGAGAAGCCATTCCAACCTGAACTCCCCAAAGAAGGGAGAATCGATGATGAAGAACCTTTCAAAATTGTCGAGAAAGTCAAGGAAGACTTAGTGAAAGTTAGTGAAATCCTTAAAAAGGATGTCTGTGTAGATAAAGGACCACTCAAATCACCAAAGAGTGACAAAGGACACTCTCCTGAAGACGACTGGATAGAATTTAGTTCAGAAGAAATAAGAGAGGCAAGACAACAAGCTGGTGTGAGCCATTCTCCATCTCTGCCAGAGAGAGTGCAAGTCAAGGCAAAGGCCGCCTCTGAGAAGGATTACAACCTGACCAAAGTTATCGATTACCTAACAAATGATATCGGGAGTAGTTCCCTGACAAACTTAAAGTACAAGTTTGAGGATGCCAAGAAGGATGGTGAAGAGAGACAGAAACGAATTTTAAAACCAGCAATTGCCCTGCAGGAACACAAACTCAAAATGCCTCCAGCCTCCATGAGGCCTTCCACCTCTGAGAAAGAGTTATGTAAGATGGCCGATTCCTTTTTTGGAACAGATACTATTTTGGAGTCTCCAGATGATTTTTCTCAACATGACCAAGATAAAAGTCCCTTGTCTGACAGTGGCTTTGAAACAAGAAGTGAAAAAACACCTTCGGCCCCACAAAGCGCTGAAAGCACTGGTCCCAAACCACTCTTCCACGAAGTCCCCATCCCTCCAGTCATTACAGAAACAAGAACTGAAGTGGTTCATGTTATCAGGAGCTATGAGCCCTCAGCTGGAGATGCTCCCCCGTCCCAACCAGAGGAGCCCGTGTCACCCAAACCGTCACCTACTTTTATGGAACTGGAACCAAAGCCCACCACGTCTAGCATTAAAGAAAAAGTCAAAGCGTTTCAGATGAAAGCCGGTAGTGAAGATGATGACCACAATCGCGTTCTGGGCAAAGGCATGCGTGTTAAGGAAGAGACTCACATCACCACAACCACCAGAATGGTTTATCATTCTCCACCAGGCGGTGAAGGTACCTCTGAGAGAATTGAAGAAACCATGTCAGTCCATGACATCATGAAAGCCTTTCAGTCCGGTCGGGACCCTTCCAAAGAACTGGCAGGTCTGTTTGAACATAAATCGGCAGTATCTCCAGACGGTCACAAGTCTGCTGCTGAAACCTCAGCCCAGCACACAGAGAAGGACAACCAAATGAAACCCAAACTGGAGCGTATAATAGAAGTCCACATCGAAAAAGGTAACCAGGCTGAGCCCACTGAAGTCATTATTAGAGAAACCAAAAAGCATCCAGAAAAGGAAATGTATGTATATCAGAAAGACTTATCCCGGGGAGATATTAACCTAAAAGATTTTCTGCCAGAAAAACACGATGCTTTTCCTTGTTCAGAGGAACAGGGTCAGCAAGAAGAAGAAGAACTCACTGCTGAAGAGTCATTGCCTTCTTATCTGGAGTCTTCCAGAGTAAACACTCCTGTGTCCCAAGAAGAAGATAGTCGCCCTAGTTCTGCTCAACTCATATCTGATGACTCTTATAAAACACTGAAGCTTTTGAGTCAACACTCGATAGAATACCATGACGATGAGTTGTCAGAACTAAGAGGGGAGTCTTACAGGTTTGCTGAGAAAATGCTTCTGTCAGAAAAGCTAGATGTGTCTCATTCTGATACTGAGGAATCGGTTACAGACCATGCAGGACCCCCTAGCTCAGAGTCTGATAAGCGGGCCAGAGAAAAAGTAGTCACTGCCCCCCAAAAAGAAATTCTCTCCAAAATCTATAAAGATGTGTCTGAAAATGGTGTAGGTAAAGTGTCTAAAGATGAGCATTTTGATAAAGTGACAGTGTTGCACTATTCTGGCGATGTTAGTAGTCCAAAACATGCCATGTGGATGCGCTTTACTGAGGACAGATTAGATAGAGGTAGAGAGAAGTTGATATACGAAGACAGGGTGGACAGGACCGTGAAGGAAGCGGAAGAGAAACTGACTGAAGTGTCACAGTTTTTTCGTGACAAAACTGAAAAGCTCAATGATGAACTGCAGTCCCCAGAGAAAAAGCAACGCCCTAGAAATGGCAAAGAATACTCATCCCAAAGCTCTACCAGTAGCAGCCCTGAGAAGGCACTGCTGACGGAACTGCTGGCCTCCGGTGATGAGTGGGTCAAGGTGAGGCAACATGGCCGCGAGGGACACGGCATCCCCAGAGCCGATGAGAGGAACGCAGCCCATCTGCCCGGCAGCCCAGAGAGGGCTCCTCCCCAGCAGACCAAGGACAGCAAGTCCACAGAGGAAGCCAAAGGAAGTAGTTCTCAGAGCAAAGAACCAGAAGGGCCCCAATCTGGGTTTCAGCTCAAGCAATCTAAACTCAGTTCCATTAGATTAAAATTTGAACAGGGCGCACAGGCCAAAAGTAAGGACGTTTCTCAAGAAGACAGAAAGCCAGATGGCCAATCCAGAATCCCAGTTAAAAAAATCCAGGAAAGCAAGCTACCTGTCTACCAGGCGTTTGCTCGAGAAAAACAGCAGAAGGCCACAGACCCCTCAGATGAAAGTGTCTCTGTGCAAAAAGATCCTACAGTACTAAAAGCTAAAGATGAGCATGCCGAGAGCAATGAGATGGTTGTAAATGATTTTGGTTCTGATGATGTGAAAAAACAGAGGACTGAAATGTCAAGTAAAGCGATGCCTGACTATTTTTCTGAGCAACAGGCTAAAGACTTGTCTTGTCATGTAACTGCAGACTTAGCAACAAAGGGACCATGGGACAAAAAGGTCTTTAGAACGTGGGAAAGTTCTGGAGCTGCTAATAATAAGTCACAGAAAGAGAAACTTTCACATGTACTTGTTCATGATGTAAGAGAAAATCATGTTGGTCACCCTGAGAGTGAAATTGTTGACCACAGGGATGAGTTTTTGTCTGTGACTGAGAGAGAACACAAATTGTTAACTAATGGCTCTCTCTCAGAAATTAAGGAAATGACTGTAAAATCTCCCTCCAAAAAAGTCTTATATAGGGAATATGTTGTTAAAGATGGGGAGCATCCAGGTGGCTCTCTTGACCAGCCTTCCAGGAGAAGTGAGAGCTCGGCGGTGTCGCACATCCCGGTCAGGGTTGCAGAGGAAAGGAGGACACCAGCTCCAGATATTCCCGATGGTTTTTGTGAGCCGTCGACATTTCCAAAACATGAACTGTCGCCAAAATTATCCCAGTCAAGTATGACTAAAGAGACAGTTGAGACACAGCACTTTAATTCTATAGAAGAGGAAAAAGTAACCTATTCAGAAATCAGCAAAGTTTCAAAACACCAGAGTTATGTAGGCTTATGCCCGCCTCTCGATGAAACAGAGCTCTCCCCGACCAAGTCTCCAGATTCTCTAGAGTTTAGCCCAGGAAAGGAATCGCCCTCTAGTGATGTATTCGACCACAGTCCCATTGATGGATTGGAGAAAGTTGTACCACTAGCCCAGACGGAGGGAGGGAAAGAAATAAAAACTTTACCTGTTTATGTCAGCTTTGTGCAGGTGGGAAAGCAGTATGAGAAGGAGATACAACAAGGAGGTGTAAAAAAAATCATAAGTCAGGAATGTAAGACAGTGCAAGAGGCCAGGGGGACCTTTTACACATGTAGACAGCAGAAGCAGCCTCCCTCTCCTCAAGGCAGCCCAGAAGACGACACTCTAGAGCAAGTTTCCTTTCTAGACAGCTCCGGGAAGAGCCCTTTAACCCCAGAGACTCCCAGTTCAGAGGAAGTGAGTTACGAATTTACTTCTAAGACACCAGACTCGCTTATAGCTTATATACCAGGCAAACCCAGCCCAATTCCCGAGGTTTCGGAGGAATCTGAGGAGGAGGAACAGGCCAAATCGGCCTCCTTAAAGCAGCCTGCAGGGGAGCAGATGGCTGCAGTCGAGCATGAAATGCCTAACGTGAGCAAGGACTCTAACCAGAGACCCAAAACTAACAGAGTTGCCTACATTGAATTTCCCCCTCCTCCACCGCTGGATGCAGACCAGATGGAGTCGGATAAGAAACATCCTTATCTTCCTGAAAGGGACGTTGACATGATTGAAGTCAGTCTGCAAGACGAGCATGACAAGTACCAGCTGGCCGAACCGGTCATCAGGGTGCAGCCACCCTCCCCAGTTCCTCCTGGGGCGGACGTCAGTGACTCCAGTGATGACGAATCCCTTTATCAGCCAGCGCCAGTCAAAAAATACACCTTCAAGTTAAAGGAGGTCGACGATGAACAAAAAGAAGTGACCAAATCCAAAGCCTCTGCTGAAAAGGCTTCCACCCAGAAAGAATTAGAAATGAATGGACCTGGAAAAGATACTGAATTCGGCCTTGGCCTTGATTCACCTCAGAATGAAGCTACCCAGAACGGGAACAATGACCAGTCCATCACGGAGTGTTCCATTGCCACCACAGCAGAGTTCTCTCATGATACGGATGCCACAGAGATCGACTCTCTGGATGGCTATGACCTGCAAGACGAAGATGATGGCTTGACTGAGAGTGATTCTAAGCTCCCCAGTCAGACCCTGGAGCTGAAGAAAGATATCTGGAACACGGAGGGCATTCTGAAGCCAGCCGATCGCTCCTTTAGCCAAAGCAAACTCGAAGTTATCGAGGAGGAGGAGGGAAGGTTGGGACCAGATGAAGATAAGCCACCTCCTAAAAGTTCTCCATCTGAAAAGACTCCTGATAAGACTGATCAGAAGTCAGGGGCCCAGTTTTTCACACTAGAAGGCAGACACCCTGACAGATCAGTGTTTCCTGATACTTACTTCAGTTACAAAGTAGATGAAGAATTTGCCACTCCTTTTAAAACGGTAGCTACCAAAGGTCTAGATTTTGACCCCTGGTCTAATAACCGAGGAGATGATGACGTGTATGACGGTAAATCCCGGGAAGACGAAAATAAGCCATTTGGTCTGGCTGTGGAAGACCGCTCTCCAGCAACCACCCCCGATACAACACCAGCCCGCACGCCAACTGATGAAAGTACCCCAACTAGTGAGCCTAACCCCTTCCCATTTCACGAAGGAAAAATGTTTGAGATGACTCGCAGTGGTGCAATTGACATGAGCAAGAGGGATTTTGTTGAAGAGAGGCTCCAATTTTTCCAGATTGGTGAGCATACTTCTGAAGGGAAGTCAGGGGACCCGGGGGAAGGGGATAAAAGCACGATCACTGCCACCCCACAGCCACAGGCAGGGGACACCACTGTAGAAACCAATCTAGAGGGAAATGTAGAGGCACCTCCAGTGGAACCCAACCCCAGCGTCCCGACCAGCGCAGAGTGTCAGGAAGGCACGTCCGCTAGTGGCTCACAGGAGAAAGCAGGAGCAGCCACTAACTCCTCTAAACTTGACCCCAAGTTGCGCACGCCTATAAAAATGGGAATTTCTGCATCCACCATGACCTTGAAGAAAGAAGGCCCTGGAGAAGTGACAGATAAGACAGAAGCTGTGATGACCAGTGGTCAGGGATTAGAGAATGAACCTGTAACGGTGGTTTCAAATACAGCCAATAGCCACATGGGCGTTAGGCCCCAAGAAAAACATGATTTTCAAAAAGATAACTTTAATAACAACAACAATTTGGATTCTTCCACTATACAGACAGATAACATTACAAGTCATGTAGTTCTGACAGAACATTCTGCACCCACTCGTACCACAGAGAAAGCTAATCCAGTGAAAAGCTCATCAGAAAAAAAGACAGGGCTACTTCAAGGACATTGTGTGAGAGAGAAACAGAAAGTTCTTGGAGAGCAGCAAAAGACAAAGGAACCAATAGGGATTAGGCGAAAATCCAAACTTCCCATAAAGGCCACTTCACCAAAAGATCTCTTCCCACCACCAGATCATATGCCAAACATTCATGTGAGTAAAACGAAGCAGGTTAGTCAGTCTGAGAAAACCAAAGGCCTTACTACTTCTTCATGTGTAGATGTGAAGTCCAGAATTCCAGTGAAAAACACACACAGGGATAACTCAGGTTCAGTTAGAAAACCATGTGCCACACAAAAGCAAGGGCAGCCAGAGAAAGGCAAGGCCAAGCAGCTTCCATCCAAGTTGCCAGTAAAGGTAAGATCCACCTGCATCACCACCACCACCAACACCACCACCACCAGCACCACAGTTAAAGTCAGGAAAAGTCAGCTTAAGGAAGTATGTAAACACTCCATTGAATATTTTAAGGGAATTAGTGGTGAGACCTTAAAGCTTGTGGACCGCCTCTCTGAAGAAGACAAAAAGATGCAGTCCGAGTTGTCCGATGAGGAAGACAGTACCTCAAGAAACACGTCGTTGTCCGAGACTTCCCGGGGTGGCCCGCCTTCGGTTACAACGAGGTCTGCTAGAGATAAGAAAACAGAGGCAGCACCTTTAAAATCAAAGAGTGAAAAGGCCGGCAGTGAGAAAAGGAGCAGTAGAAGGACTGGTGAGAATGAAGGCAGTCAGGTCTCTCGAGCACTCTTTGCTCACATCCTGGAGAACGAGCATAGTTTGTAAACACTTTCCAACCTGTAGACCCTAGTGCATGAGCTGTTGTGATTGCCTGTGGAGTGACTTAACTGTAGTTTCTCATTCCGTCATCGTCATCTGTGTGTGCTGTCTATACACTCTTCTCTCCTTCCTTTTAACCCAGCAACACTAGAGGCAGCTAGGGAAGCATGCTGAAGATATCGGTGTCATTCAAGATGAGCAACTTTTTTTTCAGTGTGCTAGTGCATATGATTCTGTCACAGTAAAAGCACAGATGTTGAAATGCCATCGTGGTGTTTTCACCCCCACGACACTTCTGTAGCTACTGTCGAGTAGCTAGCTCGTCAGCATGTTGAATTTCATTACATCGAGCATCCATGTAGTCTGACATTTGGCCTGATGTAGGTGAAAACCAAGTGAGTCATGTAAAAGAGGAGTGTTCATGTAGGTGACTAGGACACATTTCAGTGTACAGTGTTAGCGTCAGTCTCTCTGTAAAATCTGAGTACTGCTGAAAGCAATTTTCCAGTGTCGTGTCTTTCTTGATGATTGTTTTAATTAAGAAATTGTAAATCGTAG
Seq C2 exon
GTCCACAGAGTCCATGTGAACGGACAGATATCAGGATGGCAATAGTAGCCGATCACCTGGGACTCAGTTGGACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000019052:ENSBTAT00000025371:13
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.121 A=NA C2=0.208
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0053117=Death=PU(19.0=61.5)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]