BtaINT0072298 @ bosTau6
Intron Retention
Gene
ENSBTAG00000012380 | HK1
Description
Bos taurus hexokinase 1 (HK1), mRNA. [Source:RefSeq mRNA;Acc:NM_001012668]
Coordinates
chr28:25872744-25885344:+
Coord C1 exon
chr28:25872744-25872906
Coord A exon
chr28:25872907-25885195
Coord C2 exon
chr28:25885196-25885344
Length
12289 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGT
5' ss Score
10.67
3' ss Seq
TGTTATTGTCTCCCTAACAGAAA
3' ss Score
9.54
Exon sequences
Seq C1 exon
ATTGACAAGTATCTCTATGCCATGCGGCTCTCTGATGAAACTCTGTTAGATATCATGAATCGTTTCAAAAAGGAGATGAAGAATGGCCTCTCCCGGGATTTTAATCCGACAGCCACAGTCAAGATGTTGCCAACGTTTGTAAGGTCTATTCCCGATGGCTCAG
Seq A exon
GTGAGTCTCACACCCAGAGACTGGGCTCTCAGGGCTGAATGCTCTGTGAAACCATCTTTCCAACTTCCATCATTTGTTCATTTATTCATTTACTTACCCACTCATCCAGTTATTCATCCATTCACTGTTCCATCCGTCTGTTCTCCCATCCATCCATTCACCTATCCATCCATCCATCCAATTTATGTTTGTTGAGATTCTGTCTTGTGATAGGGGACACCATGTTTGGACCAGGCTGACCTCCCCTGATCGTCCTGACTGTCCAGTGACTTGTGGAAAGAGAGCATAGTGTTCACGGATCTTCCAGATGCTGTGTGAATAACTCTTACATCTCCAGGACAGGAAAGGTTCCAGAACAAGCCAAGAGTTCATGTTAGGAGAATCTCTCCATCAGGGCACCAGGGCCTCCCTGTACTATCCCAGATAAGCAGCAATCCTAATGGCCAGGTGGATCTCAGACCCAGAGGGGAGATTCAGGTCCCCATTTGAACAAATTTCATAGATGCTAAGTCAGGGTAGCCCCTCAAGCAGAGCAATGGTGAGGGGAGTAGGATTGGAAAAGGGAAATTACCCTCTTGGTCTGCATCATGTGGCTCATGTCCCGCAGTGGGCATTTGGGGGCTTCCTGAGAATTGTCATTGCCCCCGCCCTAGGGGAGTGGCCTCAGTCCCTCCACTTGGCAGAGTGGAAGCTGAGAGGGCATAGCCTGGCCTTGGCCTGCTCAGTGGAGGTCGTTCTGTCTGGCTGACCCAGTGGTGGGTGTTGTGCCTACCCCAGCTTAGCACATGCCCAGGAATCCCGCCTTGAGCTGGGTTCTGTACTCTAGGCTGGGGTTCACCTGCCATGTGCAAGGGAGGGAGAAAGATTATGAAAGTCAGATTTCTCTTGGGGTTGTGAGTACGCACTCCGAGAGTGTGGCCCTTACACTCTCTTCCTATTTCCCCTCTGCTCTTGGGACTCATTTAAAGCTGGGATTTGAGGCATCTGATATGCAGCCTTCAAAATGGCCATCGGGAAAACTGCAGCTGTTTCAGCTGATGTTTATGAAAGATGGGCAGGTGCACCGTGTGTTGGAGCGACTGGCTGCAGTGGGAAGGTCCTCTTGTGCCAGCAGCCGGCCTTTAAAGTCCTAAACGAGATTGGGACACCGTGGAAGAGCGGGTGCTCTTGTGTGCGCTGTGGCCACAGGTGGGGTTTACTTCACGCACACGCACTGGTACTTGTATCTCTCATGTTTCCTGACTTTTTAAAATCTCCACTTTTATCCTTTTGTTTTCCTTGAGGTCTTGCTCACCAGCAGTTTAGGCTCTTTTATGACTACCGAAGAGACTCTGACCATCAGAGTGACCAGACCACAGTGTCCCCTGGGTTTTTTTTCTCATGTCTCTGGCTTTGTAGTTTGCTCCTACTTTTCCCAACCCCGAATGGCACCCGTGTCCAGAAGCATTTGTGTTTTTACCAGGTTCATTGAATTCTGTAGGAGAGATGTGGCTCTGCATGCTGTCAGCTGAGAGACGGGGGAAAGGGAGATAAGATAGAGGCGCGCCCCCCCAGGGCCCCCACTCTGGCTTTGCTTAGATAACTCAGAAGGATGCCTGATGCTTGGGGGACCCCCGATCCTGTGTGACTGGCCCCGGGCTGGCCTGTCCCATGAGACGTTTCTTCCCTTTCCTCCTAAATGCTGCCTGCAAGCCAGCTTCCCTTCCGTGGCCCGTGTGTCAGCAGGGGATGCCCTACCTCATACCTTCACACACCATTTTTAGGGCTGAGGGACTCAAAGTGTGATCCAGATACACTAGTAATCTAGCCATTTGAAAACAGGGCTCCAAATGCATTCTTATTTGGGAAAAACAACATTTCCAAAGATCCCTCTTAGAGATCCAAAGCAGGGACTTGGTAGTCCCGAGGTTAGGACCCTGCACTTCCAGTGCAGGGGGCATGGATTTGATCCCTGATCGGAACGAAGATCCCATATGTTACGTGGCATGGACAAATCAAAACGAAAACAAAAGAAATTGGAAGCAGATACCAGGGTGCTAAAGGCCCTGAGCAGTCCTACAGGAGAGAAACCTGTTAAACTCGGCTACCTGCCTTTTCCCCAAACCTGTTTGCTCTTTCCCCCAATATTTACTACTATATTTCATCTATTTTGAGACCCTATTTTTGTCTTCGTTGTTGAGTCCTCTGAAATCAGCAGTGCATTGTGCAGCAGTTGCCTCTTTAAATTACTGTGAGCAGAATTTTTTTTCTCTCTTCGCATTACATAAAATAACGATGTGTCCACATTCAGTGCTGTCTTAAATGTGATGATGTAGGTGGTGATCACGCCCATGTTGGGAAATGCTGTCCTAGGGTTTGTGGAACTGGAGCCAGCAGCCTGGGCCCCATGCCTCCTTCTGAGCCTCTCTCATGTCCAGTGTGAAGGGAAGTGAATGGGCCCGAATGTTCAGGGCCCCTCGGGAGCACAGAGCAGTGCTGAGAGCAGGAGAGGAGGAAGGGGAGACGCCAAAGCCCTGAGCCCCTGGCCTGCACGGCTAGGCCTTCCCCAGCTCCGCCTCCCTCTGCCCTCCCTGGGGACTGTTTCTTCTGCTCTGTGTTAGTTTCCAAGGCTGCTGTAATGAAGTACCATGAACTGGGTGGCTTTAAACGAGAGTGATTGTCTCACAGTTCTGGAAGCTTGAAGTCCAAAGTCATGGTGTCACTGGGGCCGTGCTCCTTCTGAGACACTGGACTAAGTCTTTTCTTGCCTTTTCCTGGCTTCTGGTGGAGGCTGTCAGTCCCTGACATTCCTTGGCGTGTAGCTGCATCTCTCTACTCTCAGCTTCTGATGTCGTGTGGCATTTTCCTCTAATAAGTATACCAGTCAGATTAGAACCCACACTCACGACCTCCTCTTCATCCGATTACATCATCTAAAAAGACCCTTTTCCAAATAAGACCACATTTACAGGTACCCAGGGTTAGGACTTCTACAGAAATACCTTTTGCGGGGGATACTGTGCAACCATAATATACTGTATAGCTCTTCTCTCTATGACTGTTCCTAATATTCACGGGTGGGTTCAAGTCAGGTGTCCAGGGGCCCACACTCCTCCAGGAATGGTCCCTCCAGCCCCACATAGACACTGACATTGATGCCAAGGCCCTGGACACCAGTCCAGTCCCTGCCACTTTTTGATGGAAGTGCCTCCAACCACGAGGTCCCTTGGAGGAGCCAGAATGTGGGTCTCCTTCATAGTAAACCATGGTGCTAGTCTCTTTTCGAGATGTTAATTACTGCTTCACCTGTATAATTAGTCAGTGACAAAATTAGTGGTAATCCCAAACCACCAAAGGATAAATTGGAGTCACTGCAGTGGAGAGGTGCCCCTGCCTGTCAAGCGGTGATGTGACTTCCAAGTCAGAGGGAGAAACAAACCTTTCCTTTCCTGCTGACCTCGACCTTGATGACTGGATTACTGGAAACTGTTGGCTTTTGAAACTGTATTGATTTTTTTGAAAATGTCATCAGCCCATTTTTGCTAATTTCCCCCCTTTTGACAATTTTAATGGGCAGTGCTTTTTCTTTAATTGTTCTCAAGTAATCTATACATTAGGTTAAAAAAAGATGCAAAACCCTAAAGTGGCTTTTAGCTGCTGCATATCCTTTTTGCAATGGGAAAGATATGAATAATACATAAAGGAGGAAGATACTGAAGCCTTTTTATGCTGGTGACTTGGCTAAACAGAAACCCTTGTTCAAAGGTGCCCAGTTTCTGGGGATAGCTGCCCACCTGGATCCAGCTTCTGTCAGAAGGCCTGCCCGACTTTGGTTCTCACTTGGGAAACTTCCCCTTTTTTTCTCATCTTGTCATTTATCACTCAGGATATTGTAAATATCAATTAGACTGTAAGCTTCTTGAGGGTAAATTGAGTTGAAGATTTCCTTGTTTCTGCTTTGTGGTTCCTTAGTGTGCTCTTCACCCAGAGGATAAGTTTAGAATGTTTGATTTGCGATGTGGTCCTGGGCTTCCCTGGTGGCAATACGGGAGACCTGGCTTTGATCCCTGGGTCAGGAAGAACCCCTGGAGAAGGGAATGGTAACCCACTCCAGTATTCTTGCCTGGGAAATCCCATGGATAGAGGAGCCTGGAAGGCTACAGTCCATGGGGTCGCAGGGTCAGACACGACTGGATGACTAACACGCTTCTTCCTGGACTTCCCAGGTGGCGCTAGTGGTAAAGATCACACCTGCCAATGCAGGAGATGTAAGATCCCTGGGTCAGAAAGATCCCCTGGAGGGAGGGCATGGCAACCCACTCCAGTAATCTTGCCTGGAGAATCCTCATGGACAGAGGAGTCTGGCGGGCTACAGTCCCTAGGGTCGCAGAGTCAGACATGACTGAGCACCTTAGCACACTCACAGTTAAATTGGTGGGGCTTAAGATATACTGCCTTCCAGCCAAAGGAAGGAAAACATTTCCTTTTCTCACTGCATTTGGGCTGTTCACTTACCTTTCTCTGTCCTTATGTGGGAAGATGGTTGGATTATCTCAGAAATTCTCTCATTTGATGAAATCTCCTAAATGCCTAGCATTCCAGTTGGGTTTCTGATGAAGGTGTAAACTCTCATTGGCTAGCAGGATTGCAGACAGGAGGCTTTGTGTCTTGTGTACAGGATTAATTCATGGAGCAGGCAACGGGAGGCATTTCATGAACGCTGAGTTCTGTTTGCGCTGTATTCCAGCACAGGTCTGGACTCGAGAGAGACATCTGTTTCGGTGTTTGTTTTCCATTATTTGCTGGTAATAATGACTGTCATTAGAAAGTGGAGAGTTGCCAGGGGCCCTTCAGATGCTTTGTTTAATGAGGCTTCTATAGAAGAGCAGTTCTTCTTGGCTTCAGTGGAAATGGGAAATGTAGGATGAAGTCTCGGCAGTGGCAGGCAGGAAGGTTGAAGCCAAAGATTTGAAGAGGAGAGGAAGTAAGAAGGAAGCCGACTGCTGCAAGGAGACTGAACTTGAAACTGAAGGGGAAAATAGAGTTTCAGACCACTGGATTAATCTCTGGCTCTGCTGCGTATTATCTGTGTGATCTTGGAGAAGTCCCTCAACTGCTATAAGCCTCCATTTCCTCATCTGTAAAATGGGCGTGGCAGTCCTGCTGTGCCTGCCTCACAAAGCTGTCAAAAGGATCAAAGTGCTTTGGAAACTGCAAACCACCATGAGAGTCACAGAGAGTCATTGTTCTGCTGGTCATCAGTATAACTTAATAAATGACTTTCTAAGAATTCTTAATGAGCTTCCCTGGTGGCTCAGTGGTAAAGAATCTGCCTGCCAATGCAGGAGATGTGGGTTCGTTCTGAGGGTTGGGAAGATCCCCTGGAGAAGGAAATGGCAACCCATTCCAGTATTCTTGCCTGGGAAATCCCATGGAAGGAGGAGCCTGGCGGGCTATAGTCCATGGGGTCACAAAGAGTCAGGCACAGCTTAGCAACTAAACAACAATGAAGAATTCTTTGGAAGAATTTCCCAACTTTGGAAGGCCCTTCTCATCTGATGCGGCCAAAGGACCCCTACCCATCAGACCTAAATGTAGAGGTCTAGCCCTGGAGGAAAATGTCAGAGCTTTTCAGAATTCACCAGCATCCCTGTGATGTTATGGGAGGGAGGAGACAAAAAAAGGGGGGAAGCAAAGGCAGGCTGTCTCCCCACCACCCCAAAACCCCTCATAATGTGGATGAGCCTACAGACTACAGCTCTGGTTCCTCTGCAGCTGGGTGATTGAACACCACGACTCTGAATGGGGGGACCAACTGAGATAAAGGGGAGGATACCTCCTTTATGGAGGGCAAGTTGGTATTTGGAGCGCCCATTGCCTATAAAGAATGTTGAACCCAGCAGCCTCTGCTTGTAACTGAAAGAAATCTAACTCAAAGTTGTATAAGCAAGAAAGGGAATTCTAGGTTCACATAATGGAAAATGTAGTTGTAAGTTGGCTCCTGTAACCAAGGCCTCATCTGTCTCTTAACCAAGGCTTCATTCGTAGGCTACTGCTGCTGCTGCTAAGTCGCTTCAGTTATGTCCGACTGTGTGAGACCCCATAGATGGCAGCCCACTAGGCTCCTCTGTCCCTGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATTTCCTTCTCCAACGCATGAAAATGAAAAGTGAAAGTGAAGTCGCTCAGTCGTGTCTGACTCTTTGCGACCCCATGGACTGCAGCCTACCAGGCTCTTCCGTCCATGGGATTTTCCAGGCAAGAGTACGAGAGTGGGGTGCCATCGCCTTCTCTGCATTCGTAGGCTGCCTGTCCCTTATGGGGGCAGAGAGAGCCCCAGCGGCCGTAGCTGACACATCTCCAAACTAGAGGTCCCAAGGTTGTCTTGGAGAAGGTGGTGATTGGCTGATGTGGGTCACGTGCCCACCCTGAACCAATCACGTTGGCCAAAGTTGGGGACTCTGGATGCTCTTGGGTCACATGGAACAGGCTATCAACCCCAACCCCAATTCAGATGACAAAACAGGAAGGGTGATTATCTAAAGAGACGCCAGACAGCAAACAAAGCTTTTTTCCGGACACCTTGCTGTCCTTGCCAGAAGTCATTCCTTGATGCCCGTTGCCTGGCAGAGGTTAGGGCTGAACAGACCATGCATTTAACCCAGGTGTTCTAACTGAACTAGCTGCAAACACTTTCTGATTTGTCTACTGTATATGGGACTCAGTACTGGGAAAAAGGAAGTAAGCCTGCTAAATTACCCTTGCCTTCAAATTGCTCATCACCCGGATGAGGAAGATAAAACTTTTATGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTAATGAGCATCCCGGTATTTGCAAGTATATGAGTGACTAAGGAAAGGGAAGGGCCCTGGCCTTACCACAGGCGTGACCATGAGCAAGTCATTCAGCAGGTTTGGTTGGAGCTACCTTATCCATAGATGGAGTAGGTGAGTTAATATTTGTCCCATATTTCCTGTGCTGCAAATGTGATTTACAGAAGAGATGCCAACTGCCATTTCTTTCAGCAAGCACAAACACACCCTGGAATCAGGGTCACTGCTCAGGAAGGGATCAGGGGCTGCATTGGGCTTAACAGTGTCTGCTTGTAAAATGCCTTCAGGGAAAGGCCCCTTCACAGATCATCTCAAGACTAACTTTTCTGGTCTCCTTCTCTGCCCCTAACTCCCTGAAACCCTATTGACCTGTGTTTGTTGAAAAAAAAAAAGAAGTGAGATGGACAGACTGTGGTGGGAGGCTGGGACGGGGCAGGGGTCTTACAGAGCTGCAGAAGTGTGGGCCGGCCCCATGCACCCTAAGGCCAGGTTCTTCCCTGACCTAGAGACAGATGAGATCATTTAAACTTATCCTGCTTGAAAACTTGAGACCTGGGACTTCAGAGGTGCTGCCTGAAACCTGATTCCTTCCTGCACAAAGGGCTAAAAACTCTTACCTGTTGTGTGTTGACAATGACACCAATAAGCAAGAGATCCCCCATCACGTGGAACTTGAGCACAAGAACCTGCTTTTACCTAGTCCCTTGATTCAACTGAAGATGAGACTTTTGACCTGACTGATTTATCAAGATTTCTCAAGCTATTTTTTTAAGTTATGATGAAAGCCAGTGCAAAACGTGAAATAAATAACTGTTTTTATTTTTTAAATTAAAACAGTAAATAAATTAATTAAATAAAAATGTTAGAAAGGAAAAGCACCCATATTTTCATCCTAACACAGTGTCCGCTTTTGCGTGTGTTGTTTCCCTGTATACAAGTGGTTTATAGAGAGATGTAGCCATTCCTGACATGCTGACATCTCACGCTAATGCTGTCCCTGGGGATCCTTGTTCCTGAGGTCTGTCCAAGAGGCAGTTGTATCCGATGGCTATGTATTTGGGCTTTGGATTCAAATTCTGGCTCTGGCAATTACTGGCTATGTGCTTGGGCAAGTTCCCTAACCCCTCCTAGACTTTACTTGCTCATCTGCAGAGTGGGGATCATAATAGTACCTACTTCACAGAGTGGAGAGGGGTTAAAAGTAAAATGAGACAGAAGTACTTAGCAACTGGAGAACAGAAGGGCTCAATGAATGATAGTAACTTAAGTGTTTCTGATGTTCTAGTAATTCATTCTCCTGGGAAGGGACCCTCTCATATCCCATTTACTTTTTTACCCAGTAGTAGTGTAAGCACTATAGGGATTAGGATTCTGATGGGAACTCAGGGAAAACCCAAAACTCATTTGAGTGACCTGTGACATCAGGGTCAGAATTTCTCACAAAGCTGAGACACCTTCTTCCTAGCAGCCTCACTTGGTCTCTTTCCTTTGGACTATCGGCTCAGATGCTAAGTTGTGTCCAACTCTGAGACTGATGGACTGCAGCACGCCAGACTTCCCTGTCCTTCACCGTCTCCCAGAGATTGCTCAAACTCATGTCATTGAGTCGCTGATGCCATCCAACCATCTCGCCCCTTCTCCTCCTGCCCTCAGTCTTCCCCAGCATCAGGGTCTTTTCCAATGCGTTGGCTCTTCACATCAAGTGGCCAAAATGTTGGCGCTTCAGCTTCAGCATCAGTCCTTCCTGAACATTCGGGGTTGGTTTCCTTTAGGACTGACTGGCTTGATCTCCGTGATGTCCAAGGGATCAAAGAGTCTTCTCCAGCACCACAGTTCGAAAGCAGCATTTCTTCAGTGCTCAGCCTTCCTTATGGTCCAGCTCTCACATCTTGTACATGAGTACTGTAAAAACCATAGCTTGAACTATACAGACCTTTGTTGGCAAAGCGATGTCTCTGCTTTTTAATATACTGTCTAGGTTTGTCATAGCTTTTCTTCCAAGGAGCTAGCCTCTTAATTTCCTGGGTGCAGTCACCATCTGCAGTGATTTTGAAACCCAAGAAAATAAAGTCTGTCATGGTTTCCATTTTTTCTGTATCTATTTGCCATGAAGTGTTGGGGCTGGATGCTGTCATCTTAGTTTTTTGAATGTTGGGTTTTAAGCCAACTTTTTCACTCTCCTCTTTCACCTTCATCAAGAGGCTTTTTAGTTCTTCTTTGCTTTGTGTCATTTAGGGTGGTATCATCTGCATATCTGAGGTTATTAACATTTCTCCTGGCAATCTTGTTTCCAGCTTGTGATTCATCCAGCCTGGCATTTTGCTTGATGTACTCTGCATTCAAGTTAAATAAGCAGGGTGACAAGTAACCTTGACATACTCCTTTCCCAATTTTGAACCAGTCCATTGTTCCATGCCTGGTTCTAACTGTTGCTTCTTGACTTGCATACAGGTTTTTCAGGAGGCAGATAAGATGGTCTGATATTCCAATCTCTTTAAGAATCAGCAACATCATGTGGTATATCCATAGTGTGGAATATAACTTGTCACAGAAAGGAATGAGGTACTGGTATATGCTTCAGTGCAGGTGAACCTTGAAAGCATTATGGAACATGAGAGAAGTCAGCCACAGGGGACCACATATTGTATGTGTCCATTGTAATGAAATGTCCAGAATAGGGAAATCTCGGAAACAGACAGTGGATTAGTGGCTGGTAGTGGATGAGGCAGTTTGGGAGGAAATGGGGAGTGACTGCTAATGGGTATAGAGTTTCTTTTGTGGATGATGAAAAATTTCTGTATAGTAGTGGTGATGTAAATATACTAAAACTCACCAAACTGTACACTTTAAAATGTGATAGATGGAGACTTCCTTGGTAGGCCACTGTTGCAGTTAGGACTTCACTCTTTTATTGAAGGGGGCATGGGTTTGATGCCCATGCCCCCTTGAGCCATGTAGCATGGCCAAATAATAAAAATAAAATCAAATGTGATATTTTAATTATTTCTCAGTAAAGCTGTTACTAAGAAAACAACCAACCAGTCAGTGGTATGACTGCTTCCTGTTTAATGAACAAGAAGCCAAACTTCCTTGAATGAATGAATGGGCCACCAACCCTTGTGATCAAGCAGCTACCAAGCACTTATTGAACTACTCTGGGTACCAAGGGCAGATATAAAGAATCCTAACTTGTGATTTTTCCCTCAAAGAGCTTGTGAGGATAAGAAGAGAAATTCAGTTGTAAATGTCTTTGGTTTATTCCTCGATTCCTTTGCCACCCTCATTAATTCAAGTATTAATATTGGTTGTGTTCATACTATATGCCAAACAACCATTCTAAGTTCCAGAAATAGAGCAGTGTGTCAGAGCCTAAAGTTTGTTGGAATCAAATACAAAGAGGGTGTCAGTTTATAAAACAGAAGTTTAAAAAAACCCAACAATCCATTACTTAAAAAAAAAATAAAAACTTCAAGGGGCTCAAAATAGTGAAAACAATGTTGCAAAAGAAGAGCAGAGTTGGAGGACTTTCACTTCCCGGTTTCAAATTTTCATAAGCAGTCAGGTCAGTGTGGTACTGCTGTTAGGATAGATATACAGATCAATGAATCAGAATTGAGTGTTCACTGTGTCAATTACATCTTAAAACAGGGGGAAAAAAAGAATTGAGAGTTCAGAAATAAATCCATACATTTATGGTCACTTGATTTTTCACAAGGGTGTTAAGACTTTTCAGTGAGGGCAAGAATAGTCTGTTTAGCAAATGGTATTGCTATTTGACAGTGCCTGCCTGGTAGCTCAGTGGTGAAGAATCTGCCTGCCAGCGCAGGAGATTCAGAGGAGACATGGGTTTGATCCCTGGGTTGGGAAGATCCTCTGGAGAAGGAAATGGCAACCTACTCCAGTATTCTTGCCTGGGAAATCCATGGACAGAGGAACCTGGTGGGTTATAGTCCGTTGGATCACAAAAAACATGACTCAGCAACCAAGCAGCAACAATCCATGTGCCGAAGAAGGAAGCTGAACCTCTACTTCAGACCATGTACACAAATTAACTCAAAATGGATCAAATACCTCAATGTAAGAACTAAAACTATAAAACTCTTAGAAGGAAACATAGGTACGAATCTTTGTGGCCTTGAATTTGGCAATGGATTTTTAGATATGACACCAAAAGCATCAGCCACAGAAGAAAAAAGATAAGTCGCACTTCATCAAAATTATAAACTCTTATGCTTCAAAAGTCATCATCAAGAAAGTAAGGTGATGGTGAGACAGTGATAATGTAGCATCAGAAGTAAAATTAACAGATTTTCATTGATTTTGGAGGGGACCTGGGATAAAGAATGCTGGGTGGAGGCTTAGTGGCTTGGTTTCTCATCGCGGCCACCTCCACTGGTGCTCTGTGGCAGTCTTGGCACACAGGCCTGTTGTCTTTCTCTAACCCACTGAGGTCCACCCCAATCACTGCTCACACTGGTCGTGAGGAATAACGCCGGTTCAAGCCGGTTTACTCTTGTAAACCGGTTTACTCTTGACCAGGAGGGACTTCTGTTAAAAACATCCCCTGGGCAGAAACAACATGCATGTCCAGTATCTGATGAATGGATACACATACAATGAAATATCACCCAGCCTGAAAAAAGGAGTAAACTACTGTTATAGGCTATAACATGGATCAACCCTGGAGACTTGATACAATGTGAAATATCTAGAATAGGCAAATTCATAGAAATAAAAAGTAGAATAGTGTTTGCCTGGGGCTGGGGACAGGGGAAATGGGGGATTACTGCCTAATGGTTAAGAGGTTCTGTTTGGGATGATGAAAATTTTTGAGAATGGTGGTGGTAGTTGTGTAACACTGTGGACATATTTAATGTCAAGGGGTTGTACACTGAGAAATGGTCGCAGTGGAAAATTTTATGTTATGTATATTTTACTACAATCTAAAAAAAATCCCCTGGGGAATCAGTGGAGCTATGAACTAGCTGGAATTGGTGTCTCAGCTGATGGGAAAGGAACTCAAGGCATGGAATAGACCTCGGATGTAGGGTTTTCTCTGAGTTGAAGTGCTGTTTTTATTTTTACCTTATGGATAACATAGCCATTTGTGAGAAGGGGTAAAGGGTTGGAGAACGATGGTTCGTACTTGAATGAAGTTCATACTTCCATTCTCCTGCAGTTGGGACTGAGCGGGACTGTGTGAAGCTGTCTGCCTAGGGACGCCTGGCTGGGAGAGGGCTTCTCTTGCCCACTCTTCCAGGTGGGGCTGTACTGTGATGGGGTCTACATGACTCCTATTTTGTGGCCGAAAGCACGGTGAAGTGGGGCCAGACCCTGTTGAGAAGTGGGTGAAGCGTGCGGCCTTCCCAGGGGGACTTGAATCTGATGTGATGTTATTGTCTCCCTAACAG
Seq C2 exon
AAAAGGGAGATTTCATCGCCCTGGATCTTGGCGGATCTTCCTTTCGAATTCTGCGGGTGCAGGTGAATCACGAGCAGAACCAGGCTGTTCATATGGAGTCTGAGGTTTACGACACCCCGGAGAACATCATGCATGGCAGTGGAAGCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000012380:ENSBTAT00000016432:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.060
Domain overlap (PFAM):
C1:
PF0034916=Hexokinase_1=FE(26.2=100)
A:
NA
C2:
PF0034916=Hexokinase_1=FE(23.8=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]