HsaINT0076357 @ hg19
Intron Retention
Gene
ENSG00000156515 | HK1
Description
hexokinase 1 [Source:HGNC Symbol;Acc:4922]
Coordinates
chr10:71103583-71119801:+
Coord C1 exon
chr10:71103583-71103745
Coord A exon
chr10:71103746-71119652
Coord C2 exon
chr10:71119653-71119801
Length
15907 bp
Sequences
Splice sites
5' ss Seq
CTGGTAAGT
5' ss Score
10.65
3' ss Seq
CCTGTTGTCTCCCTAAACAGAAA
3' ss Score
9.95
Exon sequences
Seq C1 exon
ATTGACAAGTATCTCTATGCCATGCGGCTCTCCGATGAAACTCTCATAGATATCATGACTCGCTTCAGGAAGGAGATGAAGAATGGCCTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTG
Seq A exon
GTAAGTCTGTCACCCAGAGATTGAACCCTGAGGGCTAAATGTTCTGTGAAATCTTCCTTCTAACTTCATTTGTTCATACATTTGCTCATTCATTCATTCACCATTCCATCAATCTGCTCTCCCATCCATCCATCCATCCATCCGCTGATCCATCTGCTGATCCATCCATCCATCCATCCATCCGCTGATCCATCCATCCAATATGTGTCTACTGAGACCTTATGCCAGTCACTGGGGATACCATGGTTGGGCAAGGCTGACCTGCTGTCATTGACTTTACTGTCTAGTGGCTTGTGATACTTTAGAAAGTGTAGTGTTTATGGGTCTCGCAGATACTGTGTGGGTTGCTCTTATGTCTTCAGAACATGAAGAACTCCAGAACAAATGAAGGGTTCATTTTAGGGAAATCTCTCCATCAGGGAATCAAAGCTTCCCTCTCTTCTTATCCCAGATAATAGCAATCCTAATGGACAGGTGGGTCTCAGACTTAAAGGCAGAGATTCCAGACCCCCTTTGGACAGATTTCACAGATGCAGAATTGAGGCAGCCCCCAAAACAAAGAAATACAGAGGGGAGGTAGAATTGAAAGAAAAATTGTATCCTTTCACTCTGCATCCTGTGGCTCATACCCTGCAGTGGGGCGTTGGGGGAGGGCCCCCTGAGGATTGTCTGTTTCTCCTCCCCAGAGGAGTGGTATCAGCCCCTGCACCTGGCTGAGCGGAGACTGAGAAGTCGCAGTCTGGCCTGCTCAGTGGAAGCTGTTCTTCCCGGCAGACCCGCAGTTACTAGTTTGTGGAGGTGAATGCTGTGCTTGCTCCAGCGTGGCGCCCTCACAGGAATCCCCTGTTAGCTGTGTTCTGTGCTCTAGGGTGGGGCTCACCTGCTGTAGGCAGCAGAGGGAGGGAGAGCAGGAGGAAGTCAGGTTTCCCTTGGGGTTGTGAGTACACGACCAGTGAGTACAGCTTTCACACACCCCTGCGATTTCTTCCCTGCTCTCGAGGCTCTTATTTAAAGGAGTGATTTGGGGCATCTTGTATGCAGCCTGCAAAATGGACGCCAGGAAACTGCAGCTGTTGCAACTGATGTTCTTGAAAGATGGGCAAGTGGGAGTAGGCTGGTTGCAGCAGGAAAAGACCTCTGCTCTCTGCCTGCAGTCATCCTGAATGAGATTTGGACGCTGATAAAGAGGCCTTGTGCTGTTCACTGTGGCCACGGGTGGGGTCTACTTCATGCTCACATATTAGCATGTATATCTCTGATGTAAGCCTACTCCACCTCCACCCTTTTGTTTAGGTGTTGATTACTAGCACCTACTTCTAGCTTTTTAAGAACTACTGAAGAGATTCTGGCCATCAGAGTGAATAGACTGTGGTCTACCCTGGGTGTGTTCGCTTGTCTCTGGCTGGAGAAGAAAGAACTTTATATATAGTTCACTCTTGCTTTTTCCCAGCCATGGATGTCACCTACAGCCAGGAGCACTGGAACCTTTCCAGGATGAGGAGAGCTATGTAGCAGAGGCATGGCTCTGACTGCTTCCAGCTGAGAGAAGAGGAAGGAGCGGGGAGGGGAGGGGGTATGGGCAGCACCCAGGAGAGCACCTGCTTTGGCTTTGCTTGGGAGAGCTCAGAAGGCTACCTGATCCCTGCGAGGCACCTGGCCCTGTGTGACTGGCTCAGGGCAGACACAGGGGAGGAGACACTTTGCCTCCTACCCACTGGGCCCTGCTCTCAAGCCAGCTGTGTCCCAGGGACCTATGTCAGCAGGGGTGCTCTCCCTCTCCTTCACAAACTGTTTCCAGGATTGAGAGTCTCAAGGTGTGATCCAAGTGCAGTAGAAATCCAGCCATTTGCCATATTGGCTACTCCTCCAAACAAGGCTTAGAACTCATACTCATTTGTGAAATGTATTTTTCACCCCCTTTTAGAGATTCATAGAAACGGCACCCCCCCATTCCAAATATTTATGGGTGGGTTCAGTTCATGTGCCCCAGAGCCCACACTTCGCTTGCAATGGTCCCTACAGCCCCGCAAAGACATTGCTGTTGATGCTAAGGACTTGGATACCCAACCCCCAGTCCACTTCCTGCCCCTTCGTGTTGTGCCGGGCTTCTGTCTTCACCTCCCCCTGCCTCTTGGCTCCTTTATCATCCAAGAATCAGGAGATCCCTGCAGTAATCAGAATCTGGGTCTCTTAATAGTAAATCCATAGTGCTGTTCCCTTTTTGAAATGTTAATCACTGCTTCAACTGTAGTAATTAGTGACAGAATTAGTGGTAATCCCAAACCACGGAGGGATAAATTGGCGCTCACCATGGTGGAGCAATGCCTAAGTGGTGATGTGATTTCCAAGGCAAAGGAAGGAAACAAGCCTTTCCTTTCTTGCTGACCTTGACCCTGGTCGACTAGACACAGAGTTTTGGAACTCAACTGACTTTCCAGAAGCATTTCTGAAAACATATCTGATACATACATTCTGATACCTATCAGCCCATTTTTAATTAGTTTCTTTCTTTTTTGGTCATTTTTTTTTTAATGGGCAGTGAGGTTTTTGTTTTTGGTATTTTGTAGAGATAGGGTTTTGCCATGTTGCCCAGACTGGTCTTGAACTCCTAGGCTCAGGCGATCCTCCCACCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCTCACCTGGCCTGTTTTTATTTTTATTTTTTAGTTGTTCTTCAATAATCTGTATATCATTAAAAAAACCCCAAAAACCTAAAGTGGCTTTTTGCTGCTGCATATCATTTTTGAGGTAGTGGATGAATGAATAATAAAGAAGGAAAATATTGAAGCCTCTTAACATTGGTGATTTGGCTAAATAGAATTCCCTCTTCAAAGCTACTGTAGGGAGCAAGGGAAAACGTCCCCTTTGCCCTCTGAATGTTGGCTGAAAAATCAGCTCACAAAAGGCAGATTAATAGGAGAAAGGGCATACACATTTATTAACATGCATGTGGGAGAATCACAGACTGATTACTCAAGTATCCCGGTGGGGCCCAGATACTTACATTTCCTCTTTTCTTTTCCTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCACGATGGTTCAAGCGATCCTCCTGCCTTAGCACCCCCTACGTAGCTGGGATTATAGGCACCTGCCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAAGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGTGTGAGCTACTGCGCCCGGCCACACATTTCCTCTTTTCAGAGGGGAGGCAGGAGACAGGGAACAGTAAATGATTACTAGGGAGAATGAAGATATCAGGGAACAGAGATTAACCAGTACCGGTTCTCTTTGGAAATTGAATAGGAGACAGATTTTTTTTTTTTTTTTAAGACAGTCTCGCTCTGTCGCCCAGGTTGCAGTGCAGTGGCATGATCTCGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCCGGCTTCAACTTCCTGAGTAGCTGGGATTACAAGTGCGCACCACCACGCTGGGCTAATTTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGACCTTGTGATCTGCCCGCCTTGGCCCCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCCGGTTTAGGAACAGACATCTTTAAAAAGGTCCATTCAGGTGTGGTCAGATTCTTCAGTCTTCTTTTCTGCAATAGATAATGAGATAACAGGGAGGGTAAGGATAAAGTTCTCCTTGGAGGGTCTGCGTGGTCTTTATGCAGATAGGAGAAAAGCATTTTCCAGCATCTGTTGATCTTTAAGGGCCTTTAGTTCAAAATACTCATTATACCAGGGAGCCATATTTTGGGGTGAAGTATTTTGGGTTTCCCTCACTACCCAGTCTCTTGGGAATTGCTGTCCCTCTGTGCCCAGCCTCCCCCATTCGCGAAGTGTCCCTTTTTTCTCCTTTTCTCATTTATCCCTAAGGATATTGTAAGCACTAATTAGAGTGTAAGCTTTTGGAGGCTAAATAGGAATCGATACTTCTTGGTTTCGGCTTCATTGTTCCTACACAGCCTTTACCCAAAAGAGAAGTTTTTACCCAAAGGAGAAGTAAAAAAAAAAATTTTCTAGAAGCTTGGATGTGCCATTATCTTTTTTCATGCAAAGCAGAGCCATTTACAGTGTAGTCACGGTTGTTTTGGGGCCCTAAATATTCATACTACTGTTTTCCAGTCAACGGAAGGAAAATATTTACCTTCTCTTCTTGCAGCATTTGGGTGGTCTCAGTTTTCTTATATGGAAGGATAGTTGGGTTATCTCAAGTATTCTCTCTATCTGTGAAACCTCCTGAGTTGAAGGCGTGGAGTTCCCATCATGCAGCTGGATTGTAGATGGGCAGGAATGCCTGTGTATCTCATGTACAGAATTAATTCATTGAGGCTGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACCTGAGGTCAGGAGTTGGAGACCGGCCTAGCCAATATGGCGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCCGGTGCCTGTAATCCCAGCTACCTGGGAGGCTGAGGCACGAGAATCACTTGAACCTGGGAGGCAGAGTTGCAGTGAGCTGAGATCACGCCACTGCACTCCAGCCTGGGCAACAGAAACTCTGTCTCAAAAAAAAAAAAAAGAAGAATCAATTCATTGAGCTGGACTCAGGCAGGCATTTCCCGCAGGCAGAGTTTTTGCTTGCCCTGTATTCCAGCACAGGCTGGTACTCGAGACACATCTGTCCTGTGTTTGTTTTCCATTATTTGCTGGTAATAATGGCTGTCATTAGAAAGTGGAGAATTGCCAGTAGCCCTTCGGATGTGTTGTTTAATGAGCTTTCTCTTGAGCGGTTCTCCCAGCTTCAGTGGAAATGAGAAATGTGAGGAAAGGTCACAGGCAGGAGGCCCCAGTAGCAGGAAGCAAGGTTTGAGACCAAAGATTGAAAGAGGAAGTTGGGAGGAAACCTATTACTGCAGAAAGAGGCTGAGCTTGTAGCCAAAGAGAAAAGGAAATAAAAATCTAGAACACTGAATCGGTCTCTGGGTTTGCCACTCCCAACCTGTGTGACCTTGGAGAAGCCACTTAACTTCTGAGCCTCCATTTCCTCATGGGTAAAATGGCCATGGTAATCCCTGCCCCACCTGCCTCACCAGGCTATCATCAGGATCAAATGAGAGTCTTTGGAAACTGCAAACCACCGTGAGTTATGGTGCGTCATCGTCATCCTCATCAGTCTTATGATATAATAACTGGCTTTGGAAGAATTCCTTGGGAAAGTCTTTCCTAACCAATGGAGCCAGTCCAAGGACCGCACCCAGCAGGCCTGAATGTGTAAGCCGAGCCCCTGCAGGAAGGATGCAGAGTTTTTCAGGATTCGCTGGCATCTCTGTGATGTTACAGGGGAAGGAGGCAGAGAAAAGGGGCAAGCCAAGGCAGGCTGTCTCACCCCCAACCCCTGAGCTAGCCACATAAAATGTGGGTGAGACCACAGGCTACAGCTCCAGTACCTCTGCAAGGGGGTGACTGGACACGACAGCTCTGAATCAGGGAGCCAACCCGAGGTAAAAGGGACTGATAGGTCCCTTTTGTTATGGAGGGCAAGTGGGTATTTGGGGGATTCATTTCCTGACAAAGAATATTGAACTAACCTGGAAACCTTCTGGTTGTAGCTGAAGGAAATCTGACTCAAATTTGTTTAAGAAAAAAAGAGAATTCTAGTTTCCTATAACTGGGAAGTCTCGCTGTGAGTTGACTTCTGTATCTAGGGATTCATCTGTCTCTTACTAGTTCAGTCAGCTCCTTTCCTGTGTGTTGGCTTCATTCATAGGCCATCTCTCCTCTTACAGTGGCAGGGACGGCCCCTGCAGCCCTAGGCTGACCCCTCCCCTTATAGCCAGCGATCTCTGTGCAAAGAGCAGGCCTTGCTCCCCATGGACCTGTGATGGTCTTGGAGAGGGCTGTGATTGGCTTACTTGGGTTATGTGCCCATCCTGAACCAATCACGATGGACAAGATGGGTGACTTGGGATGCCCCTGGATCCCATGCCTGGATTACGCATTGGTACCCCTGGAGCTGGAGTGGGGATTCAGCCCCACTTCCAACCTCATAGGTGAAAAATGGGAGGGTAGTTATCTAAAGAGATGCTGGACATCCAGGAAAGTTTATCAGTTATCTTGTTGTCCTTAACAGACATCATTCCTCAGTGTCTTTTGCCCGGCAGCGTATAGGACCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACAAGGTCAAGAGATCGAGACCATCCTGGCCAAAATGGTGAAACTCCGTCTCTACTAAAAAATACAAAAATTAGTTGGGCGTGGTGGTGCATGCCTGTAGACCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGTTGGAGGTTGCAGTGAACCAAGATTGCGCCATTGCACTCCAGCCCGGGCAACAGTGTGAGACTCCATCTCAAAAAAACAAACAAACAAAAACATGAAATAAATAAATGTTTAGGTGAACATTAAAACAGCAAATTAATTAAGTAAAATATTAAAATAAAAAGTACCGATCATTTCATCTCAGTGTAGTATTTGCTTTTGTGCCCCTTTTCCCCCTATGCACAAGTGGTTTATAGTTGTTTATCAGACTGAGCTTTCACTGTCTTCATTAGAGAATGAAGCAAAATAAAACCAAAGCTGGCCGGGCGCCGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAAAAAAAAAAAAAAAATTAGCTGGGCGTGGTGGCGGGCTCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGATGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAATTAAATAAATAAATAAATAAATAAATAAATAAATAAAACCAAAGCTAGGCCAGGCACGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCAGGGCAGTCGGATCATCTGAGGTCAGGAGTTTGAGACCAACCTGGCCAAGGTGGTGAAACCTCGTCTCTACTAAAAATACAAAAAATGAGCTGGGCGTGGTGGTGGGTGGCTGTAATCCCAGCTACTGGGGAGGCTGAGGCAAGAGAATCGCTTGAACCCCGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCATTGCCGTCCAGCCTGGGCAACAAGAGTGAGACTCCGTCTCAAAAACAAAAACAAAAACAAAAAAAACAAAACAAAAAAACCCAAAGCTATAAGGAATCATGGAAGTTGAAGAGCCCCAGAAAAGAAGTGTAGCCATTCCTGATGTGCTGAAGTCTCTCTCTGGCCCCCACTTTCCTTGGGGATCCTTGTCCCTGAGTTCTGTCCAGGAGGCAGTTTTCATGGTTATACATTATGGCTTCGGATTCAAATGCTGACTCTGCCACTTACTGGTTGTGCGTTTGGGCAAGTTATCTAACCCCTCTTTACCTTTACTTGCTCATCTGTAGAATGGGCATCCTGACAGTACTGACTTCATAGGGTTGTGAAGATTGAAAATAAAAGGATACGTATAAGCACTTAGTGATTGGTACAGAAAGACTCAGTGAATGTTAGCTGATGGATGGTCAAATAAAATGTTTCTGATATTCTAGTGACTCACCTGCGAGGAGCTACTTCATACTGAATTCAATTTTTTCAGTTATTTCAATTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTACAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTACCACTACACCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCTCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCCGCCTCAGCCTCCCAAAGTTCTGGGATTACAAGCATGAGCCACTGCGCCCGGCTGAATTCAATTTTTTAACCTAGTGGTGGTGTAAAGTACTGTTGGAGTTAGGACTCCAATGGGAGCCCAAAGAAAATTCTATATTGATTTGAACAATGCCACAAAGTCGGGGTCAGAATTTCCACCAAATCTATGACACCTGCTTCCCAGCATTCTCCCTTGTTCTCTCTCTTTCCTTTGGACCACAAATAATTTAAAACCAGTGGCTTCATGTGATATATACATATAATGGAATATAATCGGTTCATAAAAAGGAATGAGGTACTGATCCACGCTACAGCATGGATGAGCCTTGAAAACCTTATGCCGGGTGAAAGAAGCCAGACACAAAGGACCTAATATTATACAATTCCACTTATATGAAATGTCTGGAATAGGGGCATCTGTAGAGCAGAAAGTACATTAGTGGTTGCTGGGAGATAGGGAGGTTGGGAGGAAATGGTGAATGGTTGTTAATGGGTATGGAATTTCTTTTGGGATGATGAAAATTTTCTAAAATTAGATAGTGGTGATGGTTGCACAACTCTGTAAATATGCTGAAAACCACTGAATTTTTCACTTTAAAATGGGTAAAAATTGTATGCTATATTATTATATCTCAATAAAACTGTTATTAAAAAAACAACCAACCAATATGTGAAATAATAAGAAATATACATGTTGGTCTCTGCCCCTAGTCTCTAGCATTTAGCTTCTAAAACCCTTGTAATTTCTTGAGCAATACAGGTGCTAGGAGAATCTTTGATCCTGGTCCTGACTCAGAGCTCCTAAATCCCTTGGAATTTCTTGGGTGATAGGAGAGTCTCTTTTGTTCCTTGGTGGGACCCTGGATAGCCTCAGGATGGGGGGCTGGTTGCCAGGGGGAACCAACCATGTGATCAGAGGGTTGCTGTCAGCCCCAACCCCCATGCCGCCTCCAGGGAGGGAGAGAGCCTGAAAATAGAGCGAATAAACCAATGGTCGATGATTTAATCAATCGCAACTGTGTAATGGTGCTTCCACAAAAACCTAAAACAGGCCAGGTATGATGGCTCACGCCTGTAATCCCAGCATTTTGGGAGGCCCAGGTGGGTGGATCGCTTGAGCCTAAGAGTTTGAGACTAGCTTGGGCAACATGGTAAAACCCTGTCACTACACAAAATACAAAAAAAAGTTAGCCAGATGTGGTGGCACGTGCCGGTAGTTCCAGCTACTCGGGAGGTTGAGGTGGGAGGATCGCTTGGGCTCTGGAGGTTGAGGCTGCAGTAAGCTGTGATCATGCAACTGCACTGCACTCCAGCCTGGGTGACAGAGTGTGACCCTGACTCAAAGAACAAACAAACAAAACCAAAAAAAAAAAAAAAAAGCAAAAAGAAGAAAACCTAGAATGACTGAGTTCTGGTAGCTTCTGTCTAGCTGAACACATGGAGGTTCCTGGGTGGCACATCTGGAGGGGGCATGGAAACTCCTGCCCTTTCTCCCATGCCCCTCCCTGTGTATCTCTTCCATCCAGTTCTTCATCTGTATTTATTGTAATATCCTTTATAGTAAATATGTAAATGTAAGTGAAGTGTTTTTTCTGGGTCTGTGAGCTGCCGTAGCAAACTAATGCAACCCAAGGAGGGGGTTGTAGGAACCCCGATTTATAGTGATCAGCCAGAAGCACAGGCCACAACCTGTGCTTGTGACTGGTGTCTGAAGTTGGAGGGAGGGCAGCCTCGTGTGAACGAGCCCTCGACCTGTGGGATATGATGCTATCTCCAGGTAGCTAGTGAAATAATTGAATTGAATTAGAGAGCATGGAGCTGGTGTTCACTGGAGAATTCACTGCAGAATTACTTGCTTGGTGTGTGGGGAAAAACCCACATGCATCCAGGGTCACAGGTGTGTTCTGTGTTGTGGTGAGTAGAGAAAAGGAAAAACATACTCTGGTTTTTCCTCTGTGTGTGTCTCACATGATGGCGTAACTGCTTTGTGCTTAATAAACAGCAAGCAGGGGTGCTGTATTAGTCCGTTTTCATACTGTTAAAAAGAACTGCCTAAGACTGGGTAATTTATAAAGGAAAGAAGTTTAGTTGACTCACAGTTCAGCATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGTGGAAGGAGAAAAGGCATCTTCCTCACAAAGCGGCAGGAAGGAGAAGTGCTGAGCGAAGGGGGAAGAGCTCCTTATAAAACCATAAGGTCTCATGAGAACCCACTCACTATCACGAGAACAGCATGGGGGGAACCACCTCCATGATTCAGTTACCTCCACCTGGTCTCTTTCTTGATATGTGGGCATTGTGGGGGTTACAACTCAAGATGAGATTTGGGTGGGGACACAAAGCCTAACCATATCAGGTGCCTTGAATGAATGAATGGACCACCAGTCCCTGTGACCAGGCAGCTAATGAGCATTTGCTGAGCTGTCCTGGGTGCCAAGGACAGAGAATCCCAAGTTGTGGTCTTTCCCTCAAGGAACTTGAGAACGAAGATAGGAACAGGCTGGGCGCAGTGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGCAGGTGGATCACCTGTGGTCAGGAGTTTGAGACCAGCCTGACCAACATGGTGAAAACCCATCTCTACTACAAAATACAAAAATTAGCCAAGCATGGTGGTGGACACCTGTAATCCTAGGTACTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAATGAGCCAAGATCACGCCATTGCACTCCAGCCTGGGCAATGGAGGAAGACTCCCTCTCAAAAAAAAAAAAAAAAAAAAAAAAGATAGGAACAGTGACATTCAATGTGAGAATTCCTTGGTTTGTTGTTTATTTCTTTATACCTTCATTAATTCCACAAGTATTTGCTCAGTTTTTACCTACATTCCAAACACCATTGTAAGTTCCAGAAATATAGCAGTGTGTCAGGGCTTATAGCTTGGTAGAATCAAATACAAAGATAAGTCAGCTTTATTGTTAAAAACAGAAAGCAAACCTTATTTTGTGTTGAAAATCAAAAGCTCAAGGGACCCAGAATAACCAAAGCAATCATGAAAAAGAAGAACAAAGCTGAAGGAATTTCACTGCCAATTTCAAAATTTTCAGCAAAGCAACAGTAATCAAGACATGTGGTACTGGCATGAAGGTAGACATGCAGACTAATGGAACAGAATAGAGAGTTCAGAAATAAATGCATACAGGCTGAGTGTGGTGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGCCGAGGCTGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCGTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCAGTTGTGGTGGCACACGCCTGTAATCCTAGCTACTTGGGAGGCTGAGGCATGAGAATTGCCTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCATGCCACTGCATTCCAGCCTGGGTAGCATTCCAGCCTGGGTAACAGAGTGAGACTTTGTCTCGAAAAAAAAAATAAATGCATACATTACGGTCAATTGACTTTTGACAAGAATGCTAGGACTATTCAATGAGGGAAAGAATAGTCTTTTCAGCAAATGGTGCTGGGACACTGGATATCCACATGCAAAAGAATGAAGTTTGACCTACACCTCATACCATATATAAAATTAACTTGAAATGGATCAAATACCTAAATGTGGGAGCTAAAACTAATAAAACTCTTAGAACGAAATACAGGTTTGAATCTTTGTGACCTTGGATTTGGCAATAGAGTCTTAGCTACAACTCCAAAAGCACAAACAATAAAAGAAAAAACGTAAAACTGGACTTCATCAAAATTTAAAACTTGGCCATGCTTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGCAAGAGGATCACTTGAGCGAAGGCATTTGAGACAGCCTGGGCAACATAGTGAGACCTTGTCTCTAAAAAAAATTAAAAATTAGCCAGGTGTGGTCGTATGCCTGTAGTTCCAGCTACTTGGGAGGCTGAGGCTGGAGGATTTCTTGAGTCCAGGAGGTCAAGGGTGCAGTGAGCCATGATTGCACCATTGTACTCCAGCCTGGGCAACAGAGCAAGACCCTGTCTCAAACACAACAACAACAAACATAAAATGTTACTGCATCAAAGGATACCATAAAAAAAAGAAAAGACAATCCACTGAATGGGAGAAAATATTTGCCAGTCATATGTCTGATAAAGGATTTGTATCTAGAACATAAAAAGAACTTTTACAACTCAACACATAAAAGACAAATGAGGCCGGGTGCGGTGGCTCACGCCTGTGATCCCAACACTTTGGGAGGCCGACGCAGGCGGATCACAAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATAGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCGTGGTGGTGCACGCCTATAATCCTAGCTACTGAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAAGCAGAGGTTGCAGTGAGTCGAGATTGAGCCACTGCCCTCCAAGCTGGGCAACAGAGCGAAACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGGAAAAGATAAGCCAAGTGTTTAAAATGAGCAAAGGATCTGAATAGACATTTCTCCAAGTGGCCAATAAGCACATAGAAATGTACTCAACACCATTAGTCATCAGAGAAATGCAAATTGATAAAGAAGTCAGACTGTAATAAGTGTTGATGAAGACATGGAGAACTGAAAACTTCATGCATTACTGGTAGGAATGTAAAATGGTGCAGCTGCTTTGAAGAATGGTGGTAATTCCTTGAAAAGTTAAACATGGGTTACTATTTGACAGCGATTCTTGTCCTAGGTATATATACCCAAGATAAATGAAAACGTGTCCACACAAAAACTTGGGCACAAATATTCATAGTAGTGTTATTCATAATAGCCAAAAGGTAGAAACAAACCAAATGTCTGTCAGTAACAAATGAATAAATAAAATGTGTTATATCTATAGAGTGTAACAGCCATTAAAAGGGATAAAGTCTCATATGCACTATAACATGATGAACCTTAAAAACATTTTGCTTAGTGAAATGAGCCAGTCATACAAGGTCATATACCGTATGATTTCTTTTCTTCTTTTTTTGAGACAGGGCCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCTCTGTCTCTTGGGCTCAAGAGATTCTCCTACCTCAGTCTCCAAGTAGCTGGGATTACAGGCTCACACCACCATGCCCATCTAATCTTTTTTGTGTTTTTGGTAGAGACAGGGGCTCGCCATGTTGCCCAGGTTGGTCTCAAACTCCTGAGCTCAAGCGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCTGGCCACTGTATGATTTCATTGATATGAAATGTCCAGAAGAGGTAAATCTATAGCAACAGAAAATAGATTAGTGGTTGCCTAGGGCTGGAGAAGGATGAGGGGCTTGGGAGGTGATAGTTAAAGGGTATAGGGTTTCTTTTTGAAATAATGAAAATGTTATAAAATTGGCTGTGCTGATGGTTGCATAACTCCGAATATACTAAAAACCATTGAATTGTATACTTTAAATGGGTGAATTATATGGTATGTGAATTAAATTTCAATAATGCTGTTACATAAGATATAATGATAAAGATCTTTCCCTGCCTAGGAAAATGATATGCCCCAAAGCAGTCTAGTATTTACTGCCATAGGATTGAGAGCTTGGTGGATCATGTGCTGTGGAAGGCAGGGGTGGCCGTCACCCCTGGCGTGGTAGATATTAGGACAGTGGGGATGTCACCTTAGCATCACGAGTGAAACATATCTTAACTGATTTTTCTGGGAGCATCGTGAGGATAACTAATGAGATGAAGGGTAGAGAATGTTTGGCTGTGGCTTAATGGTTGGAACTTTGCCCATGGCCGCCTGCCTTTGCTGTCCGATGGTCTCAGCCTACAGTCCTGCTCTGCCCCCTGAGGCCCACCCCAGTGCTGCACATGTCACTCCCGAGGGAGGTAACCATAGCAGACCAGTACTTTGGCCACTGGTACTTTTATGTGACCAAGAGGGACTTCTGTTAAAAGCATCCTCTGGGTGGAAACAACCCAAGGGTCCATCAACAGATGAAAGGATAAACAAAATGTAGTGGATCCATACAATGGAATATTATTCAGTCTTAAAAAGGAATGAGGCTGGGCACGGTGACTCACGCCTGTAATCCCAGCACCCTGGGAGGCCAAAGCGGGTAGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCGACATAGTGAAGCCCTGTCTCTACTAAAAATAAAAAAAATTAGCCAGGCATGCTGGCGGATGCCTGTAATCCCAGCTACTCGGGAAGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCCAAGGTTGCAGTGAGCTGAGATTATGCCTCTGCATTCCAGCCTGGGCAACAAGAGCGAAGCTCTGTCTCAAAAAAAAAAAAAAAAAAAAGGATGAAATTCTATTGGGGGCAGGGTGGCTCATACCTGCCTATAGTCCCAGTTACTTGAGAGGCTGAAGTGAGAGGATCTTGGGAGCCCAGGAGCTTGAGACTGCAGTGAGCTTTGATCACACCACTGTACTCTAGCCCAGGTGACAGAGCAAGACCCTGTCTCTATTAATTAAAAAAAAAAAGAGTAAAATTCTGAAAATATGGATGAACCTTGAAAACGTTATGCTAAGAGGAATAAGCCGGTCACAAAAGGACAAATAACTGTGTGATTCTTCTTGTATGAAATATCCAGAATAGGCAAGTTCATAGAGACAGAGAGTAGAATCGTGGATGCTGGGGACTGAGGGTGAGGGGAAATGGAAATTATTGCTTAATGGTTATAGAGTTTGTGTTGGGGTGATGAAAAAGTTTTGAAAATAGTGGTGATGGTTGCACAACATTGTGAATGTACTTAATGCTACTGAATTGTACGCCTGAAAATGGTTGCAGTGGTAAATTTTATGCTATGTGTATGTTACCACAATAATAAAACACAACCCTGAGGAGTAAGCAGAACCCTGGAATAATTGATGTCAGAGCTGACATGCAGAGACCCAGGGCAGGCACTGGGTGGACCTCAGATGTAGGGCTTTGTCTGAGTTGAAATGCGGTGTGATTTTTTATTTCTGCATAGCAGTGCTGTTTTTGAAATAGGTTAAGAAACTAGAGAAACATGGGGTGGGAATTTGTACTTAATTCAGTACTTCCATTCCCCTATAGTCAGAAGTAAGAGACTGGGATTGCTTGAAGCTATTTCTGTCTAAGGACTCTGGGGTAGGATAGGGTTTCTTTTGCCTACTCTGCGTATATGGCAGTGGTTGGATGAAGTTTGCATGATTGCTGCTTTCTGGCTGATAACAGCATGTGGCAGGGGGAGGCAGACAGGGCCTACGCCCTGCCAGGAAGCGGGCATGGTATGTGGCTTCCCCTTAACATTTGAATCTCATGTGATACCTGTTGTCTCCCTAAACAG
Seq C2 exon
AAAAGGGAGATTTCATTGCCCTGGATCTTGGTGGGTCTTCCTTTCGAATTCTGCGGGTGCAAGTGAATCATGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000156515-HK1:NM_033496:2
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.127
Domain overlap (PFAM):
C1:
PF0034916=Hexokinase_1=FE(26.2=100),PF0481510=Sec23_helical=PD(89.1=89.1)
A:
NA
C2:
PF0034916=Hexokinase_1=FE(23.8=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)