BtaINT0105563 @ bosTau6

Intron Retention

Gene

ENSBTAG00000038584 | OLFM1

Description

Bos taurus olfactomedin 1 (OLFM1), mRNA. [Source:RefSeq mRNA;Acc:NM_001101879]

Coordinates

chr11:106698456-106712955:-

Coord C1 exon

chr11:106712699-106712955

Coord A exon

chr11:106698606-106712698

Coord C2 exon

chr11:106698456-106698605

Length

14093 bp

Sequences

Splice sites

5' ss Seq

CAAGTACGT

5' ss Score

8.4

3' ss Seq

CCCTCGCCCCCTGCCCCCAGGTG

3' ss Score

12.69

Exon sequences

Seq C1 exon

GGAGATGCAGAGCGGAGGCTCCGCGCAGCAGACCCCGCGCGCCGCCTGCTCCGGGTGCTGAAGGCGCGGGGACACGGCCGGGCGCCGCCGCGGAGCCCGCAGACCGGGAACGCGTCCGCGTCCACGCAGCCGCCGGCCGCCGAGCACCCAGGGCTCCCCGCACGCCAGGACGTCGGAGGCGGCCTCGAGACATGCAACCGGCCCGGAAGCTCCTCAGCCTCCTGTTCCTCGTCCTGATGGGCACCGAACTCACCCAA

Seq A exon

GTACGTGCATCCAACGCCATTTTCCTCCCTGCGTGCGAGGCGCCCGCCCGGCCCGGGGCCCGGCAAAGTCGGGGAGCCGCTCCGCACAGCCCGGCGCCCCCCTGGCCCGGGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGCCTCCCTCCCTCCCAGAATAAAAGAGGAAACAAAAGAGAGAAGAGAGGGTGAGAGGTGGATCACAGGAGAGAAGGCTCTGGAATAAGCGGCCCTTGTTTTCGCTGGGAAGCGCTTGCCGGCTCCCTGGCTCTGTGGGAAGTGCATGCGGCCCCAGCCCCAGCCCCAGCCGCGGGAGACCCTGCTGGTACCCCGCAGGCAATCAGCCGTGCCCCCTGGAGAGGGTCCACCCGGTCTCCGGGTGAGTTTTCTTGGCTGCAGGGATGGCCTGGCTGAGGGGCAGACTCGGGCTCTGTGGGTGGACACTGTATGAGTGCACGTGCCCACGCTCACACACGCTCCCACTCCACACACACGAGCACACACGGCAGAAAGGAGCCAGGAAGCATGTGCCTAATTTAGACATCTCGGGGAGGAGATGGCTGGTCTGGGTGCCCTGGAAGTGACCACCCTCGGGCCCTTCAAGCCCTACTGGCCTCCTCACCTCCAGGCTCCCTGAGTCTCCATTCCCAGCCCTCCTCCAAAGGTTCACTTATCAGTCTTTTTAAAGATCCCCTGTTCTTGGAAGAAACTTTTGGTCTAGCTTGGGTTGGAAGCTTTGTCTGGGTGGCGAGAGCCCTCACCCGTCCACTCTGTCAGTAATGGACATCCGAGTGTGGCCAGCCCCTGCACACACTCCTGCAGCCACACCATCCCTTCAGGACCCTGGTCAGCTCCCTGAGGCCTCCAGGCCAGGAAGGGAAATGATGTTGTTTTCTTTGGAAGCTTCCTGTTTGCGAAGCGGAGCTGTAGGATCCCTCAAGGGAATGACTCCCTCAGCACAGCCGACGGGCAGGGCCCTACCCTCCGGGCTGCCTCTGAGTCTGTGCTGTGAGAATCTTCCGTCAGAAGCCTAGTATCCCTAATGGTAATGGGATTTTAGAGCCGAGGCCCAACTGGCAGAGATCACTTTAACTGGTCCACGTCTGTGAAGCTGTCAGACGGTGGCTGGCTTGGCCACCCGCTCCAGAGACCCCGGCTGCCCTGGTCCCACCCAGGTGGGCTTCTTTGGGATCAGGCCAGGCGCCTCTCTCCTTCGTCAGACCTCTAAGGCAGGGACTGGGTTTGGGGGTAGGTGTGGTACACGGCTGCTGTGAGTCTGAGAGCTCCTTGGAGACACCCCTACCCAAGACCCTTGCTTTCTTGATCCCAAAGGGATCCGACTCTGGGAAGCCACACTGCCTGGCGTCAGGAACGATGGTCCCTGCACGTGTGATGGGTGATCACCTCTGGGCTTCGGGACAAGGAGGGCAGGGCAGTGGTGACCGGCCTGGGTGGGCTCCGTCTCCCCCCGCCCTCTTCCTCTCCTGCTTCAAGTAAGCTGCCCCCACGGCCGCACCCTCCGTCTCAGGGGCCTTTTGAAGAATGTGGACACGAGGTTCCAGGGCCGCTGTGTTTATGGATTAGGGCCCGTCCGAATGGGAACAAGTCGGAACCACGTGGGTGTCACCTGCACTTCACGGACGCTGCTTGAAGGATTCAGGCAGACGGGCGGGGGCGGGTGGAGCGCACATGGCCGGGCCATCTGTTCTCCCAACAGCGCGCTTACGATGAGCCACTCAGTCAAACGCCAGCTAGTGATCGATGGCCTACTACGCGCCAGGCTCGTGGGCCCAGATGAACTCTGTCCCCAGACGGAAAGACGCTTGACTGGGTCTCGTGCTGTAGTTTTTAGGACGAGGCTGGCGTTTGCAGCTCCTTGAGAAGCACCACCAGAGCTTCCCAGCAGAATGCAGAACTGGATCTGCATCTTGGCGGAGGCACCCTGCCCACCCCAGCCCAGCTCACCTTCCCTTGCAAGAAGCACGTGGCCCCCCCGTGTGACATGGCCCAGAAGAGGAGGGCAGCTCTTGACAGTGACCCTGGGCCGAGCTGCCCCTCCCCTCCCAGCCCCACCAGCCACTCTCTGGTGATCTTGAGAAGGGCTCTGAGCTTCAGCCTGAACGTCCACCCTTTTAAAAGAAGAGCATGAAGCCTGGTGAGGCTCGAAGATGCCTCCCTTGCTAACCCCGCTCCGGTCCTGTCCTCCTTTCCTGCTTGTGCAGCTCTCTGATACCAGCTGGTCAGGCTTGACACCGGCACGCCTGGGCGGGCGATGCTGAGTCCAGGCCTGGCCGTCTGGCACACGGGCCACGGTGCTTAGTGGGGGACTGAGACACTGCCAAGCCGGCTTGTTCGAGAGGCCCGAGGACGCTGGGGTCGGAGTGGAGGGAGCTGAGCGTGCTTTGGAGAAGGGATACCATTTGCACCTGCTGAGCCCGGGCAGGGAGATGGGGAGGCACAGGTGGGCGAGGGGCGCTGCACACAGAGGCCACAGCACGCAGACAGGCCCAGAGCCTCGGCGCTCAGCAAAGGAGCGTTGAAGGATTAGCTTTATCTCTGGGGTGAAGTGGATCCCTTTTCATTAGTCCCCAGGCCGGGCGTGGCCTTTCGGAATTACAGGCCCTGACCCCTTGGGGTGGGGGTTCCAGCTGTGAAAGGCGCATGGGCACCTCGGAGCGCCAGCCGTCCCCGGGCCCTCGGGGGCCCCCAGGCTTTACAGAGTGACTGGTGACGCTTGTCCGGAGCCCGGGGAGCTGCGTGCAGGTCTCAGCATCCAAAAAGAGGCGTGAGTGGTCCCCGGGGCGGGGTGGGGGATGGGTCCTGTGAGCCGGCAGGCAGGGGGGATGGGTCCTGTGAGCCGGCAGGCAGGCGTCTCAGCGGGGCCGACGTGGAGCTGACCACTCAGCACCCTCTCTCTTCAAACCTGTTCTCTCCTCCTCATATCCAGCCAGACTGAAGACCCCAACCCACTGCCCTGAACAAACCGAACAAGAATAAAGCTGTCCGTTCAGACAGAAGCATGATTTCTGTCACCTGCTTGAGTCGGAGCCGGGGCTCAGCGATCCCACTGACGTCCTGTCCACCTGCCCCAGGCCTTCACTCCCCAGCTCTTTGGTCCACTTGTGCTGGGGTTAGTGGTCCAGGGGGTGGGGGGTTCAGGACAGCTGGGCTCAGAATGCGTGCAGTTGACTCCGTCTCTGCAGCGAGCTTGGCCACTGCCTCGGGGGCTGCCCAGAGGCTGCCCAGGAGGTGCCCTCGTCTCTGGGCAGAAAGGCCCTGGGACACCCTCTGTGACACCCGGGGGCGGGGCTGTAAATCCCCGTCGTGAGGCAGCTGCTTCCTCTCTGAAAGCAGTGTGTCCCTCGTCCCACCGACTCCAGCCTTCCCCAGTGGAAAGAAAGGTGATGTTCTGCCTTGGGTTGTATTTATCACCAGAGTTATCGGGCCCTGTAATCAGTATTAACACTGGGTGTAAAGTCATACAAAACTAATTACTGGCTAAACCGAATTAGATGCATGCCGCTGAGGGCGGGGCAGTGGGGACAGAAGCTGTTCTCGGCTCTGGGGGCGCCCCGCAGACGCTTCACCCCCAGGGCAGCAGCCTGAGGTCCCTCCCAGGGCGGCTCAGATAAGGGAATAGAAACTGCACCAGAGAGATGCACCGTCTTCATTTTTTCAGATGATTACATGTCAGAAACTTGGCCGGGAGCTGAAGGCACTAGGGGGGAACCAATTGTGAGGGTTAATGTCCCTGCGTGTCGCTGAGCACCGGCCCCTCCCCACCACGGGGCCTAAGCCTCAGCGCCCTGGGCTACTGTCCGCAGTCTCCAGATGAGGAGGCCAAGGGGCGGGTCGCGGGCGGTGAGTCACCTGCCCAGTGGCCCAGCGCGTAGGTGACAGACCCTGGATGCGGCCCAAGTCTGCCGGACACCCGAGTTCGTGTTCTTGTTACGACAGAGAGAGAAACACAAGAGCAGGGAAATGGCATCGCTGAGAACCAGCAAGGAGGGGCACTGTCAGGTCAGCTCCCATGGCCTTTGGAGAGGGTTTGAAAGCCGGGTCTCTAACTGTGTGGCCCAGCGCTCAGCCCGCTCTGAACCTGGAGCTTTGTGAACCAGGGCCCGCGGGGGTCAGCTGCTTCCCGCCCCTGAGCTGGAGAGAGCCGGCAAGCCCTTCATCCCGGGAGGGGAGGGCGCCTTCGAGGGAGCACTGGTCATCACCTCAGCTCTCTCCCGCCTAAAGGGAGGCTTCACGCAGGGAGCCGTGCACTGCCCGACTCTGTGAGCGTCTGCGCAGGGACTGAGCTCCAGGGAGTAAGAAACAGGATACGGCCCTTCTTAGTGTGTGTCCCCTCTGAACCTCCGAACCGGCCCCGACACCGGGTCACACTGTTTGTTACATTTGGTATGATTTGTAATTTGGGGGGAGGACAGCACTTCCCTGAGGGCTCAGCTGGTAAAGAATCCGCCTGCAATGCGGGAGACCTGGGTTCGATCCCTCGGTTGGGAAGATCCCCTTGAGAAGGGAAAGGCTCCCCACTCCAGTGTTCTGGCCTGGAGGATTCCATGGACTGCGTGGTCCATGGGATTGCAAAGAGTCAGATGCGACTGAGCGACCTTCACTTTTCACTTTCACAGCACAGCCGCAGGAAGGGGGCTCCTCCTTGCCTACAGGTCCCCCCTTCTCCTGCACCCAGTTAAACCCCAGGACAAACGCCAGCTGGCAGTGTGCAATGGAGACGTTTAGAAGACGTGGGCTCCCCGTCTCCTTGCCCAGGTCTCAGCAGTGGGGGCTTGGCCTGCGTGTTCCTGACGTTCAGGCCACGGCATTTAAAAGCAGACCGTCAGTAAGAGGGGGTGAGTAAGAAGCGTCTCCACCAAGGAGCCCAGGGCAGAGGAGGGAAGGTGCCGAAGCCCCAGGCTCTGTCTCGGGGGCACGCTCACCTTGGAGATGCTCGTCTAGGGTGTTCGGTCCATGCAGCACAGTGAGCACACCCTCCGGGAGCTTAAACCCCCCAGCCCCGGTGTCCCCAGGCGCGCCCAGCCCTCACGGGGGCTCTGGAGAGAAGGTCACCCCCACTGGCTTCACATGATGCTTTGAGGGACTGAAGGTCAAAGAAAGAACAGAGGTGTGTCCATAAATATTATAGACGACTTTACTCTTCCCTCCGTGAGCTGGTTATAAATCTGACAGCACAGTGGGACCCTGAGAAAGGGTTGTGAACACTTCCACTTGGTGATGGGTGGGCGTCCGCCCCGCCCCGCCCCGCCCCTGGGCAGCCCCTGAACCTTGCCAGGCGACTCTGCACGGCCGGAGCCAGTGGCGCGTGGCCCCTGGGGAGAGGGCACTGGCTGAGTCCCCCTGTAATCAGCTCGAGGGATTTCTCAGGCCAACTCCACCCGTCAGCAGAGGGGCTACGGTTTCTGAAGCCAAGTCCAGGCTCCACAGGCAGGGGCTGTGGTTGGGCTGAGATGCTGGTGAGGGGTGCAGAGCGGGGCGTGTGCTCCCGGGAGAGGCCGTGCGCGGAAGCCTCTGGAATCCACCTGCAGGGAGTCCTCTGCTCCAAGCGAGTGTTACATCCTGGGGTGTTTCCTGTGTTCCCAGGCGGACCCCAGAGTTGCCTCTTAGATGTCCTCACAACGACATCACTCTAATTCACGCCAGGGTCAGTTACTTAGAAGAAGCCAGGCTGCCCTCAGCTAGGTGTGACAGGGCCCTGCCTGGGAAGGGGGACTCGGAGTTGTCTGCGGCCCCGGAGCCTAGCCCCGACCCCGGCGCCCTCTGAGCCCCCCGTCTCTCACAGGCCTCTCTCGGGACCTGGCCGCACTTCTGCTGGGGGGCCTCAGACAAGGTGGGGCCGTGGCTTCCATCCCCGTCTGGGCCGACGGCCTGAGGCGATGGGTCTGTAAGGAGCGTGGGACTTTCCTGAGCGGGAGCAGAGGTTGTGGGCAGCCCAGGGTGGGCCTGGGGCGGCTGGCTCTGCGGGCAGCCAGGGCAGCCGACAGCCCTGCTCGCCCTCGCGGAGGTGGCCCCCGCTTGGGGTCTAAAAGCTGTGTGTCCTGACGGTAGAGTGGGAACGCGGGCTTGAGCAGGCAGCAGAGGAAGGACAGTCCATGGTGGTCCCCCACGGTGGTCCCTCGCGGCTGCTGGGAGGGTGGCCTCCTCCAGCAGCGGAAGGCCAGGTCCTGCCGCCCCCAGAGGTCCCAGGAGAGCAGGAGGAAGGCAGGGTGGACAGAGCAGAGAGGCTCCGCGCCCCTGCTGTCCCCTGCCTCCCCTCCCCTTCTCTCTCTCTCTCCCCCTCCTTCTCTGTGCCCCCACCCCCAGCCACAAGCAAATAGCTGACGGAAATACGGATGTTCTTAAATAGCAGAAAGGCCTCCACACTGTCCTCTGGGGTCTGCCTTGGAGCACGGGAGGCTGGCCCCGGGCCCTGTAAGTCCTCGTGAGCCCCATGGGCCTGTTTCCTGTCCGTGGAAGGGAGGTGATCAGAGGCGCCTGCCCGACACGCTCCCTCACCCCGCGGCCATTGGGGGGACTCTGTCTGCAACCCGGACCCTGCCTGCTGAATGCCCCTTATAAGGAGGACAGGCTTGGAGGCGGGAGGGCGCGTTCAGTGTTATGTAACGCCGGTCCCCACCTGCAGAGCCGGGAGGCCCGGGGATCCTAGTTTCCCATCTGCCGGTGCCTTTGCATGGAGCCCACCAAGGTCAAGGCTGGGACGGGCTGGCGTGAGGACAGATGACCCAGCCCGCAGGCCCCGCAGGCCCCGCAGGGGCCGGGGAGCGGGCAGAGCTCCCCGCACTCCCTCAGGCTTAGCTGCCCGGAGCCCAGCCGGGCTCTGGCAGGAACAGCGGGGCATCGTGCCCGTGGAATGGCACACTTGGCAGGTATCTGTGGCCACGAAGACACGGTGCTCCTGCACCTCGAGGGGTGTCACGTGGCTCGGGCCATCACGTGGCTCGGGCCACGGTCTGAATGCTTGTGTCCCGCCCCCCACCACCCACCAAATCGCATATGTTGAGATACTCACCCCCAGAAGTGATGGCACAAGGAGATGGGGACTTCAGGAGTTGCTCTGCCCTCCTGAATGGGATCGGCCCCTCCTGACAAAGCTCGAGAGCCCCTCACCCCTCCCGCCACGTGAGGACGCGGGGAGGCGGCCCGCACTGGACCGTGACCACGTGGCGCTTTGATTTCGGACATCCGGCTCCAGAACTGTAAGCAGGAAATGTCCGCTGTTCATCAGCCACCCAGCTGGTGGTCTCAGACGGCCCCAAACACCGTGACATCTGAGGGGCGGAGGCGGACCGTGTCTTTGAGCCTGACCCTGGGAGAGGGGCTCCTCATGTGACCTTGGGCAGGTCTTGTCATCTTTCTAAGCCCCAAACGCCTCCTCTGTAAAGCTGAGCTGCCTTGGCACCATCCCGAGGGCAACTGTAAGGATTCTGTGAGTCACTTGCTTCGTGTAAGGGTGTCTGGGGCGCGGTACCCGCTCCTTAGTCCAAAGACGGCTATTCAGGGCTGCAAATGTAAGTGAGCCCTGGCTCCAAGGAGAGCCGTGTAGGAAGAACACTCGGCGTTGGCCAGTGCCACGGAGCTTTTAATCCGTATGCCTCCATCCTTCAACAAGCCTCAGTGTGCTTTTGGAAGTGCTGTGTAGCTTCTAAATCAAATTACACTTGCTGAGGCTTCTCACGTGACCCTTTCCAAATGCATTATAAGCGGTCGTCTCTCCTCCTGAATCACAGATCCCGGACACTGGAGAGGAGCTGGGTGGGGGATTAGAAGGGAGTGACCTGCCCTGACCCTTCCAGTGGTGAGAGCCACATGGTGTCGGTTACAGAAGCACAGGTGCGGCTCCGAGCAGCAGTACAGGGTCCCCTCGGGGGAGCCAGCTGCGTCCACAGCCTCTGGGAGGGGAGGCGGGAGCAGTGCGTCTGTCCGATTCTGTATAGCGAGCTGACCGGTGATGAGATGGTGGCCAGGACTTAAGGGCGTCCAGTGGGTGTGAGTCAGCTTTCCTCCCATCCCTCTCAGTGCTCTGAGCTCCGGGGGGTCCGCTGAGTTCCCAGGGAGCTGTAGGAATTCCAGGGTGCGGCCCCATTTGACAGCAGGTGTGAGTGACCCAGCGCTTTTTAAAGGACTCTTGTCAGCCATGCTTATGGGGATGCCATGGATGCCTCAGGCTCCCCTTCAGGACTGCAGGCTCAGGAGAAACATGATAAGGGGGTTTCGGGTCTCCTGGCTGGCCCTAATTGCCTGCCCTCTGGTGCATCTGGGAGAGCCCCGGGCCGGGGGAGCGGGGCAGGCTGGCCCCTCAACCCTGGGGGCGTCTAATACCAGCAGGACTTGGCTCCATTGGAGCAAATGACCTGGATTTCATTTCCTCCACTGAACAGCCCAGCCAGGCTGGCTCTCTTCTAATTTAGAGTACCCATTGTAAATCCCCTGGGACATTACTGCCACAAAATCAGATCAGAAGTTCTTCAAGATCAGAAGAGGGTTTTTTTTTCTTTTTCATTTTCTATGTCTGCACGTTTGGCGCTCACCTTCCTAGAACAGCTCTGGGTGTTGGGAGTTGTTTCCACATCCAGCAGCACTTCCTCCGTATTCGTGTGTCTGTACCAACGGCATCTCTTGTGGGTGGTCTTTAGCTAAAAGCAGCTCTTAGGAGAGGCGGCGGGGTGTCTGGGGGCGTCAAATCCCAGCTCATCCCACGCCCATGTGTCAGTTGCCCCACTGAGGGTCCCCTCTGAGCGCTGGGTCTTCTGCAAAGCGGGCGTGACAAGGGTGGGCACCCTCCTGGCTGCCACGTCTGCTCTTGCGCTGACTCACTGAAGCCTCATACACCCTGCTAATATGCCCTTTACAGATGGGGAAACTAAGTTATGGGAGGGCTAATTACCTTGGCTGAGGTCACACAACCAGTCAGGGGCAGAGAACCCAGGCTGCCCACACCTAGGGTGTCTGGCTGCAGAATCTGAACACGGAGCAACCCTCTGAGCTGCCTGTCTTGGTCGGTTGGCCGGTTGGGAGGTTTTTGTTCCTGCACGGTGCTGGGAGTCTGCTCCGCCGCGCTGGTGGTGTTTCTGAGCTGGGGGTTACAGCGGCTGCACCGCGCGTCCCGGCTCTGATCCGGGGTCATGCACACAGGAGGTGATAAGAGCCTGCTGCTTCCCGACAGCTCGCGTCAGGGTTTTGCAGACACCAGCCTCGGGTGGGATCTGCAGGGTCCCAACAAAGCGGGGGTGCATGTCCTTCTGCAGCGGGAAGAGGGGTGTGAGTGATTTGGGTCGACAAAGCTCGTGGCCCTAAATCGGTGTTGAACGTTCACTGAATGAGAAAGGAGGCGGGTGTGGGGGACGGCGCCCCCTCACCTGGCCGCTGCGCTGGCGGCCTGGACGCCCGCAGAGCCTGCAGTACCCGCCGCCACTGGGAGATGGCGCCCTTCCCCAACTCTTGAAATTCTCTGCCTGCCACCCGAAGGCTGCCTCAGATCCTGGCTTTAAGCACAAAAACAAGCCCAAGGCGCCCTTTTGGCTCATGGGTCTCGCACCCGCGCTCAGGCCAGGGCCGTCCTGGCTGTTAGAGTCCTCTGTCCCTGGGAGCAGAGAGTGGAGCCCAGGAAGGCAGTGTCCCTCCTCGGTGGCCCGGGAAGCCAGCCCCTTCCCGCCCCTGTCCGCCCTTCTGGCCTGCCCGGAAGGGAGATCGATTTCCACGCAGACAGTGGTGTGGGGCGCTGTCCTCCCCACACGGCAGGGAGGCTTAGCTGGGGGCCCGGAGGAGCACCTTTCTTTTCCGTCAGAAGCTGCCTGCAAACTCTAAAGCTCTGTTAAGATGTATGACCCAGTCACGCTTGTGCTTCAGAGGGGACTTCACATGTCCTGGCATGGATGCTGCCAAGGGCTGGGGAGTTGTGCCAGCCTGCCATGCCCCTCTGCCCCTCTGCCTGGGCACCAGCTGCCCCCACCCCACAACCCCAAGGAGGAGCCAGTGAGGAAACGCGCCCCTGGCCCACCACCTGGACCACACTCACCCCGGGGTGGGGCCGCGTAGGCAACCCCGCTCGGAGGCCTGAGCCCCCAACCCACGCCCAGCTCCTGCCCTGCCGCCGCATGCCCACACCCCTCACAGGCTGACCCGGGAGCCCGCACTGGGCAGTGCCAGGGCTGCCGGCAAAGGCCTGCAGGGTCCCAGCTGCCCTGGACTCCCAGAGGGGCCTCTCTGCTCCCCTTGGCCCTCTCCGCCAGCACCGGGGCTGGAGACCCCCACCAGGAGCTGCGTTTGGAGCCAAGAGTTCGGCTGTCTGGGTTTCTGCTGGGCTTCGGGGCCTGCGGGGCTGGAGGGGGCCTGGAGCCACCACCTAGCAGGTCCCCAGCAGCCGGGCTAAGAGAGACCTGGCTGGGTGGGTCGGCGGGTGGGGTCTCAGAGCGGTGCCCGGGCCTAGCTGGCCGGCGGCCTTGAGGATGGAAAAGCGGAGGCCCGCCCAGCCCGTGCGCAGAGGCCGCCGTGTTTGAGGACGGATTTTGATGACTTGCGGGGCGGTGGTCTGTCTTTCCTCGCGGTCGACGGGGCTCTGCAGACCTCGCTGCCAGCAGCCAGGGGGCGGCGGGGAGCCGGATTGGAGAGGAAAAATCCACCCATTTCCTGGGCAGATTGCGTCGGCCGCCGCCCGGCCGTGTCCCCGCCTCCTGGCCGCGGCCCCCGCGCGCACTGCGCGCGTCACACAAAACCGGAACCATCACCGGAGCCGTTAGGCCTTCCCCCACAGTGGGTATATAACGGAGGAGGAGGGGTGGTCCCCAGGAAGGACGGGGGATTGAATTAGTGGGATATTGGATGAAGAGAAAAGGATGGTTTTGACGGTCAATGAGAAATCTCAAAAGTGCTGGAGAAGAACCTGCTTGAGACATGGAAGGGCTTGGCCCTGGGAACTGTAGGGTGAATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGGCGGAGGGTGCAAAGGGGCCGGTCGGGGCCCGGGGGTGGGGGGTGCGCAGCCGCGGGACTCGCGCCTCGCCCTCCGCGCCCCCTCCCGCCCTGCCTCCCCAGGCGCTTCTCGTCCCTTCTCGGTGCCCTGGGGGAGGGGACGAGCGGCGGGCCGCCCCTGGGCTCGGCGGACTCAGGCGGTGGCGGGAGCGGGCGGGCGGAGGACGGGGCGCGTTTTTTGTCGGCTCCCCCTCCGGAAAGGAGAACTGAAGGACACGCGCCCCTCTCGCGCTCGATCCCTCGGCTGTGAAGGGCGCCGGGCTGTAAGGGGTCTCCGGGTGACCGCTTCTGCCACCGGCACCCGTTCACCTCACCTGCCCTTCTGAGGACTGCGTGCAGCCGCCTCCTTGCTGATGACTTTGTTCCTGCCCCGGGGTCCTGTGCCCCTGGGGCTGGAAATGAATGAAATGCAATGTTTGTACCCTGGACTCCGTCCACCCAACTTCTTCCCATCCCCACGCTAAAAATAGAAGGGAGGTGACCTGCGGCCACCGGGCAGGCTGCAAGACCTGTGCTCAGGGGGAGTTTTCAGACGGTAGTGTCCACCCCGGGTACCTGGCGGTCGGGACCACCTGAGCTGGGCTGCAAGGTGACACCAGCCATGTCTGTGTGTCAGCAGCCGTGTGCAGCTCAGGTGTGGTGAGGGTGCTGGGCACGCCTCAGGGCTGAGGCTGGGTGTGACCCCTGCACAGCGTGTCACCAGCAACTTGGCGACATCTGCCAAATGGCTCGTGGGCGGCAGCCTGTGTTGGGTGGAAGCCCAGCGTCCCCTCAGGGGCCTTCACTAGGCAGGCGGTGGACACGGCCGGGGCTTGGGGTCATCCCAGCTCCGGGCTAACAGGCAGCTGGATCCTGGCTGTTCCTCCCCAGCTTCGGGGAGCAGCGGAGCGCGACTGCACCAGCCGCCCCTGCTGGCCTTACGGGAGGAGATCTTATTTCTGAATTATGTGCGGCTGTGACTCAACCAGCCGCTTGCTTCCCTGCCTCGCTCCTCACCCAGCTCACAGCCTCTGCTCACCCCTCCCTTCCACCGAACCTGTCAGCTGGGTCAGACGCCAAAACTCTAACCATCCCCTAAGTTTAAAAATCCCTTGAATTAAAAACTATGTTTGAAAGAGCCATGCCTATTAGACTCCCTTCCAGCCCTGGGATCCTGATGGGAGACCGTCTGGGTTCCTCCCCCATGTGCCCCCCACCCCGCGGTCAGCATCTGTCTTTGGACTGCTTTTTTTCTGCCCTTTCCTGGGGGCTGGGCGTGAATGGTCATGCCCGGTGCGATGTTCATGGTCTCACTTTCTCTCCCTCCCTCTCCCTCGCCCCCTGCCCCCAG

Seq C2 exon

GTGCTGCCCACCAACCCTGAGGAGAGCTGGCAGGTGTACAGCTCTGCCCAGGACAGTGAGGGCAGGTGTATCTGCACAGTGGTCGCCCCCCAGCAGACCATGTGTTCACGGGATGCCCGCACGAAACAGCTGAGGCAGCTACTGGAGAAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000038584:ENSBTAT00000061530:1

Average complexity

IR

Mappability confidence:

NA

Protein Impact

ORF disruption upon sequence inclusion (1st CDS intron)

No structure available

Features

Disorder rate (Iupred):

C1=0.222 A=NA C2=0.170

Domain overlap (PFAM):

C1:

PF0081212=Ephrin=PU(5.6=27.3)

A:

NA

C2:

PF0081212=Ephrin=FE(45.4=100),PF123083=Noelin-1=PU(46.5=94.0),PF149421=Muted=PU(43.5=80.0),PF130121=MitMem_reg=PU(31.2=48.0),PF100464=BLOC1_2=PU(29.6=42.0)

Main Inclusion Isoform:

NA

Main Skipping Isoform:

ENSBTAP00000053660