BtaINT0129725 @ bosTau6
Intron Retention
Gene
ENSBTAG00000011275 | SCUBE1
Description
signal peptide, CUB domain, EGF-like 1 [Source:HGNC Symbol;Acc:HGNC:13441]
Coordinates
chr5:114749151-114767260:-
Coord C1 exon
chr5:114767125-114767260
Coord A exon
chr5:114749280-114767124
Coord C2 exon
chr5:114749151-114749279
Length
17845 bp
Sequences
Splice sites
5' ss Seq
AAGGTGAGC
5' ss Score
9.6
3' ss Seq
TCACGTGCCTCATTTTGCAGACA
3' ss Score
9.8
Exon sequences
Seq C1 exon
GCAGGGGCTGTCGACGTGGACGAGTGCTCGGAGGGCACAGATGACTGCCACATTGATGCCATCTGCCAGAACACGCCCAAGTCCTACAAATGCCTCTGCAAGCCAGGCTACAAGGGGGAAGGCCGGCAGTGTGAAG
Seq A exon
GTGAGCCCGGCCCAGCCCTCGGGCCAGACCCACAGCCCCCACGGCCCTTGCAGGTGGCCTCGGTCAGCCCTGGCAGGGAGGCTGCAGGCTGCCCTGGAACCTGGGCTGCTTCCTTTGGAGGTCGAGGAGTATTTAACTCTCCTTGAGTTTGAAACTTTTGGAGTTTCTATTTAATGAGAAATTGAGGTGGAGCACTGGATGGTGTATTTGTCCATCTGTCCCTGACCAGATGTATATGGGGTAGAGGCCTGGGGTGACCCCCAGGGTGGTTGTTGTTCAGTCGCCAAGTCGTGTCGGACACTTCGCGACCCCGTGGACTGCAGCATGCCAGGCCTCTCCCGGTCCCTCGCCATCTCCCGGAGTTTGCCCAATTCATGTCCATTGAGTCGGTGATACCATCCAACCATCTCATCCTCTGTCACCCCCATTCTCTCTGGAGGAGGGAATGGCAAACCACTCCAGTATACTAGCTGTGAGAACCCCATGAACTGTAGACCCCAAGCTCCCTAGTTTCAAATCCAAAGCTACCTGTATATCCTGTGTAGCTTCCCCAAGGGAGCTTCGCAGGAGCAGCCACAGCGCCTGTGGGGTTGGCTCAGGTCTCCTGCGTCGATGATACGAGCGTGGGCAGAGACTGGTGTTGTCTGTCTATCTAGCCTTCCTTCCCGGCACCTGGGATGCTGGTTTGAGCGTATGGCCCTAGAAACTCGGCAGGCTGAAAGTCAGAGGCAAGAACACTCTTCACTGTCTTTGGAGGGGACTTCCCAAGCTGGACAGAACCTTTGGGAGCATTTGTCCAAGAAGGTCTCTGGTCATTCTGTCTCCAAGGGTCTGGCACACGACCCAGCATCAGGGGGCCAGAGACGGCTCTCTTCCAAGACTGATGTACAGCCCTGGTTGAGAATCAGGATCCAAGGCTTCCCTGTCTGTCCCCGCTTCACAGATGAGGAAAACTGAGGCTCTATTGGAGAAGTCACTTCTGCAAGGTTCCCCCCCAAACCCTGTTTCACAAGGGCATGGCTGCGACTCATACCCAGGCCCCTTAATTCCTGCCCAAAGCTCTCTGTCATCTCATTGTCTTCTCCCTGAGCCCTGCCAGCTTCCATTTTCAAAACCTGAGACTTGTACTAGGTAAGCAAGGTGGGTGCCTGCTCCTAGGTTTTTATAGGAGCTGGGTTTTGTAGGGAACACGCTGTGCCTCCTCAGGATGCCGGTATTGTTTATCCATCTCATTTGTTGGGCATCTACTTAAGGCTGAGTGCCAGATAGATGACCCTGTCCTGGATCATGCCCAGTTTGGCCACAGCCCTGGCCTTGCTTAAGGCCCAGAAGCCAGAGCGGGGAGCTGGCGCCTATCCACAGACCTCTGGAAGGAGGCCAGGCTGGAGGCAGATAGAGCAGGCCGGCTGCTGTTAGGCCTGGGCATGAGCTTGGTGGTTCTGGCTGGCACATGTGAGACGCTGTTTTCTTCTTATCTTTTGCTCTGCCCTCTGGCTGGGGGCTTCCCAAGGTGACCCCTGTATCCACCAGTTGAAGCCGCTGACCCAGCCTGTTCCTCCTCCAGCCCAGCTCCTGAGGTGGCCCACCCCCGCCCCCCGCTGTCCCTTGCCCAGGATGCCCACGTTTTGTGCCCTACCTGTTGCCCTGAAGTCCTGCAGAGTCCAGAATAGCTTCCCACTCTGCTTGAGTGGAACCCCCCAGGGTGGGGGTCCCGGTCACTGGCTCTGGGGGCCTGATGGCCCCAGTATGAGGATAAAAGAGAACAAAGCTGTGAGTGTGCTTCAGTCTCTCCAGCCTGGCTCTAGCCTCTGGCCTCATCTGAAGCTCGGATGCCCTTGTGCCCTGGCCACACATACACACACCAGGCCAGTCGTGTTTCTGAGACCCAGCTCAGATGTTTCCCCTTCATGGAGCTCCTTTCCCTCCTTTTATGCCCTGGCTAACACCTAATCTGTCTTAAGACCTCCTGAAGACTGAATGAAATCATCAGCTCTCCCCAGCCTTTCTGGCACCAGGGCCCGGTTTCCTGGAAGACAGTTCTTCCGTGGACGGGGAGGGATGATTTGGGGATGATTCAAACGCATTGCAGTTATTGTGCACTTTGCTTCTATCATTGTTACATCACCTTCACCTGCGGTCACCAGGCATTTGATCCCGGAGGTTGGAGACCCCTGGGGTAGGGTACCAGAGCCCTGGCAACCTCAGTGTCTGGTTGACAGTGGGCACTCAGCATACAGTAGGCGCTCAGCACCCAGGGGGTAGTACTGTTACCCATGTCGTTGTCAGCATTGTTATCTGCTCCCATCGTCATCATCAAAGCTCTGTCATGTACCATTGGTGGTTTCCATGGTGTAAATGGGGGCTTCCCAGGTGGCGCTAGTGGTAAAGAACCCACCTGCCAAAGCAGGAGGCATAAGAGACACAGATTCGATCCCTGAGTCAGGAAGATCCCTTGGAGGAGGAAATGGTAACCCGCTCCAGTAATCTTGCCTGGGTTAAGATTAATCCCATGGACAGAGGAGCCTCTAGGGCTACAGGCCATGGGGTCCCAAAGAGTCGGACATGCCCAGAATGATTTAGCGTGCACTAAACCTCAGGCGCGGCAGACCGTTTGCTGGCACCTTCTCCTGTAGCAGACGTCAATCAAACCTGCTTTCCTTCCCTGGGCCCCTTCATCTGCAGGTCCTGAGCTGGTGTGGGGTTTGCAGAGGCTGGTGTTGGAGTTTGGGAAGAAATGAGTTCCCTTGTCCTAGAGATCTGAAAGGTTTTGCTGTTTACTGTGGTAAACAGAGAGGACAGGGTCTTAGCAGGCCCAGAGAAGGCGCCTTCCACAGCCTCCCTCACTCTTCACAGGAAGAGGTCAGCCTGTGACCGCGCCCTGCCTCCCAAGTGGGGCCAACTGAGCCCCATAACTGTTGCCTTGAAACTCCTGCTGCCGGAGGAAAACCCTTTAGCAAACCCGGTGCCTGAAGCAAGCAGACCCCCCCCGTTCCGGGGATGGCTTCTCACCACGTGTTCAAGGCCATCTTGCCACGTGGTCATGTGCACATGTGATGATGGCGGTGTGTCTGCACACGCAGCCGCGGTGTGTCCGGGGAGCAGCCTGGGGCCACATGTGATCAGCTTACCGCCGGCAGGGGGCTTGCTGTAGGCAGACTGAGGGGTCTCAGACAGCTGGGAAAGACCCTGAGCAAGGCTGAGGATAAACCAGTGTTTTCTCGATGGTTCTCATCTGACAGTGTCTGAAGTCACTCGAGGTGAGTTCACGGACATGCAGAGTTGGAATGAGCTTTAAAGGGCCTCTAAGGCAGCCCCCGAGTTTTATAGATGACTGCCCCTCTTTGTTGGCTTTGCCAGCCCCACAAAACCTCTGTTTAGCCCACTTCACTCTGGCTTAATGGTTCCCAGGTCTCCTCCTGGAATGTGGGCTCCTCAAGGTCAGGGTCTGTTACCTTTCAGCTCTGATGCCTAGAACCCAACACCAGGCCTGGCACAGGGATTGGGAGACATCTGTTGGGTGAATTGGTGGATGGATGAGTTGCAGTGGTCACCTCCTCCAGGAAGCCTTCCCTGCTGCCCCAAACAGGTCAGCTGTCACCAATGAGCATCACTCCTTTGGAGTTCCTGTCACACGGGGTTGCCATGACCTGTGTGACTTCACTTAGGGTTGGGCCTAGAGCTGGCACTGGTGGATGAGGTGAATGACTATTGCCCATGTCTGAGGGGTATCAAGAAAGGTCTCCTAGAGCCTCCCACACTTTGAAGGTTTTACGGATGAGGAAGCCAAGTCTGGAAAGGGGTGAGGTCTAGTCCACGGATGTCTGCTGGGACCAGTGGCAGAATTAGGTTGAGGAGATGGGGCCCAGGAAGGTTAGTCTCTCACCAGGTCACCCAGCTGAGGGACAGAAGGGCCTAGACTATGATCCCAGTCAGCCATGAGGTCCCAGCAGTGGCCCAGGCCCCCAACAGCCTTAGCTATGGAGTGTCAGGGGGGCCTCAGAGACCTTTTCACACCCCCCCTTGCCTCCGTCAGCTCTTCTGAGCCAGGCCTCATGAGCCTGGGCCGCTGGAGACATTCCTCCCAGCTAGCTGACCGTTTTGAATGCGGTCGTTCTCTGTATCTTTTCCTCCCTAACTTCCCCCAGCACCACTGTCCTTTTATAGGCCCTCCAGTTTGCCGGCTCCTTCCCACCCCAGGGCCTTTGCACATTCTGTCTCCCCATCCTTCTTCATTTAGCTAAGCTGCTGCATTCCCCACCCCCACCAGGCACGCTGTGCATGGACCTTCAGGGAGCTGCCAGGGCCAGCCCTGTGCTGGCCTCCTGGTCTGAATTAGTCGGGCCTGTTTGTACTCTTTCTGTCGAGGGGGCAGGCCGGGGGTGAGGAGGGGGCATTTCAGTCCCTTTAAATGCTTCAACTCATTTAACTTTAATTGCTTTGTTTTCATAGACATGTGCTAAGGAAAAGGACCAAATTATAGCTTGAATTGGGTCTTGCTAATCTTAATGAAAAGCTCTCATTTATAATCAGGACCAGGTCCCAAACGTGGAGCGAACCACCCTCAAATGGCTTGTTTAAATAACTGAGACCCTCCTGATCATCACTGTTTAGTCTGCAACAGCAGTGCACATCGCCCCTTCTACGTGTACTTAATTTCTTAAACCATTTATTCAAGTGCTTTCTTCCACTTGCAAGTTCCAACTCGGACCTTTTCCAAAACGTCATAATTAAAACTCTTGGGGGAAATAGCTTTTTGTTTTGGCCACAGTATATCAAATATATTACTATTTTCCGTTTTCTGTGAAAAGGAAAAAAATGACAGCCTTATGGGCATCGGAGATCACAAAATTAGCATGTAAGTAATGCATGTAAATAGTCACTTCCTGAATTTTATATCCCTGGGGCCTACTTGTCAGTCACTGAAGTTAGGTAGATTACAGGCCATGCTATTAAGTGTTTTAACAAAACTCTTAATAACACACCCAGTGATCCATTTAGTTTAACATCAGAAAAAAAAACAAAAAAACCTTGAGACCAATTGGCCTTCTGAGGAAATAATGTCTATGACCTTATTAAATCATTTTCATCATTATTACACTCTTTACTGAAACTCCAGATACAATTCTGCTTTTTTGGGAGGCCAGCAAAGGCAGTTCAGAGGTGGGCTGGGAGGGGGGGAGGAGGGGAAATTCTTCTTCGAGTCTTAAAACGTGCAATTATGCATGCTAACGTGTGCCCTGCTGAAGATGAAAGCGCTGGAGTCCGGCAGACCAGCGGGCAGGAAGAAATCGGATGTGACTTAAAATTCCAAGCTGCTGTCAGCTAGCAATTAGGCAGCGTGGCTTGCAACTGGTCCTAGATCTGCTGTGGAGCTGAGGCTTCTTGGAGCCCTGGTCCATTTTGGGGAGGAAAAGTTAAGAGCTTGTATCGTTGGCATCGAAGCACGAAGAGGCATTTGCTTCCCTAAGCCTCGGTTTGCCCGGGTGTAGAATGTGTCCACTGGACCAGATTCAGTTCAGGATGGAAACTGTTCACTGAGCACCTACTCCGTGCCGAGCTCGGGGCCGGGGCCACGACCTGTTTTCCCGATCTCCCCATTCAGGGGAGAGACAGATCGGGAAAGACGTGATCGTTAACAGGGCGTGGTAAGTACAGCCGTGGAAATACAGACCAGACTCAGTGGGGCGAGAAGGACAGGGGCCAGCACTGCTGGGGGAGGGGGAAGTCTGAAAGGGCTCCCTGGAGAGGCGGTCATCTGGGCTAAGTTAGGAAGGCAGAGGGGGTCTCTGACACTCCTTCCAGCTCTGATGGTCCCGGAACACGTGTGTCTCAAGGATGCCGAGGTCTGATTTTATCCCTGCCGACTCAGTGAGTGCAGCAGGTGACTTAGCCTTCCTCCCATCGTGTGGGATGGGGGGCACCTGTCTCACCCGGTGGGCGCCGAGTGGGGGCTGGGAGAGGGACAGCGCCTGGCTATAGGCACGAGTGCCTGCGATCAAGCTTTCTTTTTTCTCTAAATCCCCATTTCTCCTAGGGATAGAGGGCCTCTGCCCCCACCCCCACCCCATCTCTGAGCACCCACCCCCCCACCCCCAGGGCAGTAGGCCTCCTTCCGTCCCTTCCTCTAGGCCCTCTAGCCTCCTCTTGGCCGCTTCTTATTACAGTGGCTATATTTGTTTTTCCATCCGAGGAATGCTAACCAGCAAAAACCATTATTTCTAAGAAAATAAACCACGGGCCTTGTTGGCCTTTGAATGCTACTGAAGTGGATGGTGGCCTTCCCCAAAGGCCTTGAGACAAAGAGGGCTGGAGGGCTCGTGTGTGCAGGCAAGGTCAGGGGGTCTCGGAGGGGTGCTTGGAGGGGCTCTTCCAGATGGGCCAGGGCTGCAGCCCCTGGGAGGAGAGAGGGGAAAACCCCAGCTGGCCAGCGTGGACTTGCTGCCCTATTAATAACGGCCGCTGCTGCAGCTCAGCCTCCACTCCCTCCGGGGGTGCCCAGAGGCACTACCCTCTCCCAGAGACCCCTCCCCCCGCCCCCCACCTCTGTCTGGACCTCCTGCCCTTTGAGTCGAGGGGAGCAGGGCTGGATGTAGGTCCGTGGAGACCTGGGCGCCCGCCTAGGTGACCTTGGGCAGGTCTGTGGACCTCTTGGGCCTTAGAGTGCGTGCTTAGTCGCTTCAGTCGTGTCCGACTGTCTGCGACCCTGTGCACCATGGCCTGCCAGGCTCCTCCCTCCATGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTGTCATTTCCTTCTCCATGGGCCTTAGTGTGCTGACTGCAAACTCAGGCCTCTTTTGAGCCCCACAGTGGGCAGCTCTATCTTCAGGGTGCTCCTTGCTACGATGGCGCCCAGTTTGGGCTCAGTCTGTGAGGTGGGCTCTGGCAGGACTGTGGGCACTGACAGCCCCACGGGCAGGCCTGGCCAGACCAGAGTGCTGGGGGAGCAAGGCTGTCCTTGCATGAGACGTGTTCATCCTTGTCTGTGTCATCCTTCCTGTCTAGACTGGCAGCTCCTCGTGGCCAGGGTCTGGCTGAGGACAGGAAGGTGCTGGGACAAGAGGGCAGAAGTTGGAGAGATGGCTTGATCCCTAGTGAGGACCATGGGCCCTGGCTCCCTATTCACTGAAGCGTGGGGCATTCTCCAGGTGACTGTGTCTAGGTTAGGATGGTGGAGTCTGCCGCCAGCCTGCCTGGCTTCCAGTCTTGGCTTTGCCACTTCCTAACTGGGCGATCTAGCATGCGTCCCTTCAGTTCTCTGAGCCTCGGTGTCTCTTTCTGTGACGGGGAGAGTGAAGCCCTTCCTGCTTGGCTGTAGCTGCGGGCCATTAGAAGACGGTGGGCAGTCAGCCTTGCCGTTACTGGCATGACGATTAGGGAGCAACTCCACTGGGGACCTGGAGAGAAAGGGAGTAAAATCAAAGTGCTCCAGGCCAGCTCCTGAGCCTCCGGAGCCCAGAGGGCAGCCTGTGGGCTTAGGGGGAGAAGCCTGAGCTGTGGGTCTCGGGTTCAGCCCCAACCTGCCGATATGGTCAGCTCTTCAGTCCCCCTCTCTGGGTTCAGTTATCCCTTTATCAAATCCAGGGGTGCACTGGAGGAGCTCTGGGACCCCAGCCTGCCTGTTCCAAGTGGTGGCTCAGGCTCTTGGGCAACTGTATTTCTGACCATCCTTCTGTTGAGTTCACAGGTTGGGTCTGTGGAGCACCCCCTCAGAGCCTGAAGTCTCAGGGTCTGGGGCGTCCCCCCTGCCTTTTTGGTAATGGGGGTGGGAGAATGACTGTGCTTCTGATTGGCAAGGGAGCAGCAGGAGCCTCAGCTCTGAGCTGGCAGCCCCTCATTCCCATCTTGAACACTCTGAGAAGGCCGCTCCCCACCATCCAGGTTGCTTGGGCATCCGCTAGGCCTGATGTCAGAACTTGGGAACAGCGAAGGGTCCAGAGGGTTTGGGAGGGAGAAAGGGAGTAATTAACTGGCCCTTGGGGTTCAGTAGGCAAGTCCCAGCCTGATACTTGGGAGCCACAAAGCTCACCATGAGCCCACACAGAGCAGAGGATACTCAGGGTCAGTTCACAGTGAGTGCCTGCACCCAGGCCGAGCCCCCGAGACTCCCCAGCATGATGTACGAGAACACTGACAGCATTAACTGAGAAAAACAGCTTTAATGAGATATGATCCATGTACTATACCCTCACCCACTTAAAGAATACAATTCAGTGCCTTTTAGTATATTTACAGACTTGTGTACCCATCACCAAAACCAAATTTAGACCCTCTTCATTACTCCAAAAAGAAACACTGTGCCCCTTAACCATCACTCCCCAGCTTCCCAGTCCCCAGAAACCACTAATCTGCTTTCTGTCTCAATACTTTTGGCTCTTCTGCAGAAGTCATATAAATGGAAGCCCACAAAATGTGGCCCTTTGTGACTGAGAAAGCATTCTCCAAAGTCTGATGGCCTGGCCCACTTCCTGGCTCCCCTTATATTAGCTGTGTGACCTCGGGCAGGGCAGCAACACCTCTGAGCCTTGGTTTCCCTTGCTGTCAAATAAAGGTGTTCATACCCACTTCTTAGGGTGCTCAGAGCCAAGGGCCTGCATACAGCCTCACACGTCCATGAGGGCTTCGATCGAGATGGCTACTCATTCGTTCAATGCCAAGCAGACTTTGGGGAGACATGCTGCTACTGCTGAACCTGCAGCTCACCAGGACACGGTTCTTGCCCCGTGGAAGTCGCAGCCCCGAAGGACACGTAATAGCAAGTGACAGCAATGAGTGTCCTTTCAGGGAGCCGCGGGGCCCAGAAGGTGGGGCGAAGTGCCCCCCCCGCGTCTGCCAGGCAATTTGCAAGAGTTCAGAGCGGGCAGTGATGCGGACGCTTGGTCTGTGGAAGGGCATGGATGTCTGTGAGCTCTGGGCAGAGGAAAACAGCGTGAGCAAAAACATGGAGGCCCGAAGCCGTGGAGGCCCGAAGCCGTGCAGGCCACTGGGAGAGGTCAGCCCACAGCTCAACCCCATGGTTACCTTGGATCATGGGTTGGCTGGGGGGAGGACCTTCCCACCCTCTGGCTGAGCCATGGTCATTGTGTGCCGTTAGGAATGAAAAAGTATATAGATTTGTGTTGGTTTTGCATGACCTTTGACCTTTCCCATAATTAACTGCTGGGCCCACTTCTGGCATTGTCTCGGCAGAAGGGAAACCTGATCGATGGATGCCAGGAGTCTGCCGAGAGCGGGTCTCATTACTCAGTCATTACAAACCCAGAGCTTAACCCTGTGCCACCGGAGACGGGGGGCTTAATCCTTCCTGCTGGGCGGCCCTGCGGAACCACCTTCCCGCGAATGTAATTAGCCAACAAACCGGATTAAGATTTATTCACCAATAAGGACTCAACTTCCTAAGCCATACATCTCTCCCAGAATGGTTGCCTGATCTAAGGAGTGCACGGTTTTTCCTAAAGCCCCAGACAAAGGAGAAGACGTGTTAGCGCCCAGCCAGCGAAGAGTTCTTTGTTAGAGCGTTTGCTCTCCGCTGTCTGCAAGGAATGTTGAGAAAAATGCCAATTTCGAGGGGAAACGGGGAGATGTGTTCAGTAATGATTTCTGAGAGTGGCCAGTAGGGTACTTTAAAAATCCTCATTTGGAGAACCTTTCCGGTCAGTCCTGATTTTTAGAACTAAAATGCCCTAAATGGTATTGAAATGAGAAGAATCTCTGACTCATTGTTGTAGACTCTCTTCGAACCGAGGCACTACAGAATAAATGTATATTTTATGGGGCAGCAAGAATCAATTTTGAATTAAAAAAAAAAAAAACAAACTCTTCCCACTCGAGTCCAGGCCAGTGCTGTTGGCACGTAACTACAGCTGTGGAATCGTGTGTGCGTGCTGCCATTTTAATAAAGGAAAAGTGGAATTGCATGACCTTTTAAAATCCTATAATGAGCAGCTCCCTGTGCTGTTTTTCTCTGCTCTGTTGGATGTTGGAAGCTGTTTTCTGTTGGAACTTGAGTTCTCATTAAAAAAAAAAAAAAAAATCCAAGCTGGAGAAGAAGTAGGGATGTTTGGGGCGAGCTGTTGGCCTTCTATTCCTGAACACTCAGGTTGGAGCTTTGTCCTGGCCACTTTCTCTGATATGAACATCTCTGTCACTACCTCTTAACCTCAGGAGCAGGTACGGACCTTGGAAATAAATACGATGATGCACACGATGTCTCTTCCCCAACTTTCTCCTTAATAACTTTTTGAAGCATAAAGCACCTTGAGGATGTAGCTCTAATAGGAATAGAGCCTGCATCTGAATGCAGTCCCTCGCTCCCCTTCCTGGGAAGACCAGGTCTGCAACCATGCTGGGCCTCAGCCTTGGCATCAGGACAAGGGAAGCAGTGGCCACACGGACCTCCCACACCGCTTCACCCCTGTGCTCTTCGCTTCTGCGGCCCCGGAGCCGTCCTCCCTGTGGGGCTGTGTTTCACATGGTTTCTTCCTTTCTTCCTGAACATCCTCTCTGTGCGTCTTTATCCAAATTTCCTTCTTAGAAGAACACCAGTCTTGGATTAGGCCCATCTGACTCCAATACGCATGCACGCTAAGTGGCTTCAGTCACGTACAACTCTTTGTGACCCCATGGACTGTAGCCCGCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGAAATGGGTTGCCATGCCCTCCTCCAGGGGATCTTCCCAACCCAGGGATCAAACTCATGTCTCATGTCACCTGCTTTGGCAGGCAGGTTCTTTACCACTAGCGCCACCTGGGAAGCCCGTACTCCCTACAACCTTATCTAAAGCTTGATTACATCTGCAAAGATCCTATTTCCAAATCAGGTCACATTCACAGGTACTGAGGGTTAGGACATCAACACCTCTTTTGAGGGACACAAACTCACAACAGCCCTTTGAGAATAAATATCTGGACCAGTCTCTCAAAGCAAAAGAAATAAAAGTGAAAATCAACAAATGAGACCTACTCAAACTTAAAAGTTTTTGCACAGCCAAGAAAACCATAAACTAAACAAAAAGACAAAGTATGGAATGGGAGAAAATATTTGCAAATGATGCGACTAACAAGGGCTCAATTTCCAAAATATACAAACAGCTCATATAACTCAACATCCAAAATAATGAGAATAACCTAATCAAAAAATGGGCAGGAGATATAAATAGATGTTTCCCCAAGAAAGATGGCCAACAGGCACGTGAAAAGATGCTCCACGTTGCTAATTATTAGAAATGCAAATCAGAACCACAATGAAGCATCACCTCACACTGGTCAGAATGGCCATCAACCAGAAGTTTACAAGTAGTGAATGCTGGAGAGGGCATAGAGAAAGAGCACCCTCCCACACTGTTAATGGAAATGTAAACTGGTGCGGCCACTATGGAAAACAGTACGGAGGTTCCTCAGAAAACTAAAAATAAAGTGGCCATATGAGCTGGCAATCCCATTCCTGGATATATAAGCAGACAAAAGTATAATTTGAAAAGATACATGCACCCTTATGTTCACAGCAGCACCATTTACAATAGCCAAGACATGGAAAGAACCCAAGCATCCATCAACAGATACGTGGTTTAAGGAGATGCAGTGCGTATGTTGGGCTGGCCACGCCAGCACAGTACAACGGAACATTACTCAGCCATCAAAAAGAACGCAACATTGTCATTTGCAGCAACAAGCGTGGGGCTAGAGAGTGTCATACTAAATGAAGTGAGTCAAACAGAGAAAGACGAATATGATGTCACTTATGTGTGGGATCTAAAAGATAATACAAATGGATCTATATGCAAAACAGAAGCAGACTCATGTACATAGAAAACGAACTTACGGTCGTCAAAGGAGGAAGGAAGGAATTAGGGGTGTAGGATTAACAGATACAAACTACTGAACATAAAACAGATTAGCAATAGACTTACCATGTAGCTTAGGGGACTACATTCAGTATCTTGTAATAACCTATAATGGGAAATAATCTGAAAATATATAACTGAATCACCTTGCTGTGCAGCTGAAACTAACCCAATATCATAATCAACTACACTTCAAATTTAAAAAAAAGATTAAATAACTAGAGAGCTTGGCTCTGCCCCCCTCCATTCCTTCACCCTCTCCCCACTCCATCTGCCTGTCCCTCATTCTCTAGCTTTAACAGTCCTGAAATAGTGATCCGACATAGACAACAGACTGGTGGTTGCCAAGGGGGAGGAGCCTGGGGGGAGGGCTGGAGAGGGAGACGGTGGTTAGCAGATGGAAGCTAGTATATATGGAATGGACGAACAACAAGGTCCTGCTGTATAGCACAGAGATCTATATTCAGTATTCTGTGATCAACCAGAATGGAAAAGAATATTTTAAAAGAATGTATATATACATATATATCACTTTGCCGTACAGCAGAAATTAACAACATTGTAAATCAACTGTTCAGTTCAGTTCAGTCACTCAGTCATGTCCAACTCTTTGCGACCCCATGGACTGCAGCACACCAGGCCTCCCTGTCCATCACCAACTCCCAGAGTTGACTCAAACTCATGTCTCTTGAATCAGTGATGCTATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCGCCCAATCTGTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGCTCTTCACATGAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTCCAGTGAGTATTCAGGACTTCAATAAAAATATTTTTTAAGTGGCCTGAGACTGATGGGCATCTTGGAGGCCTGCGGGACCTCCTCTGGGGCTGCTGGCTCTTGGATACGGTTTTTACAATAATAAACCTACTTGCTTTGGCAGAGTTTTTGTTTGTTTATTTATGTGTTTATCTCTCATGCATTAAAGGGTGAGGCTCGCATGATTTTAAAAAACAAAAATTCAAGGCAAAGATACAGAAAATCAGGGGAGGTTTGATCTCTGAGCAGATGGTTCTCCATTCAGGATTCTGGATGGGCAGGTAAAGCAGGTTGGCCCCAGAAGCCTGTGGGAGCACTCCAGGGCTGGTGATTGGAGAAGAGCTGATCATTCTAAGTGCTCGGATCTGGGGGAATCTTTTGGGAATGGATTAAAAGAAGAAATGTGAACAGTAGACACTGCTCTCCTCAGGGCATTAGCATCCACTGTGGCCTACACTATTGGGAGTCAAAGGAAGGGAAAGGGTAGAGTTTAAGTTCATTTTTAGTTTATTTATTTATTACTATTTTTTGTCTGCTCCTCGTAGCTTTCAGGATCTCAGTTCCCTGATCAGGGATTGAACCTGTGTCCCCTGCAATGAAAGCACAGAGTCCTAACCACTCTGCCAGGGAAGTCCTAGAGTTGTCATATTGACTATCCAATCAATCTCTTTATAAAAAGCAATCTCCTTATAATGCCTTATGTGTATGGTGATCAAATAGTTTATCATTTTGATAGTAGAAAGGTTGCTATTAGCAATTATCAGACAACAGGCATAAACCAGAGCTTTGCCAGGCAAATTTGGGTGTATGATTGTCTTAACTGGGGAAAGACATCTTTCTCAGACAACGTCTTAAAACAGTTTGTGCAATTGAATTTTATGGATGTGGTGACTCTGTAACTGATTGTGTTTTCCTCCTTGCCTTGGCTTCTAGGAGGCTCAGAGCCATATTTATGGCCTTCCTTTTGTAACTGTGCTGAACTTACCAATCGTATCTCTGCATACATTCACCAGCTTTCCCTTATTCTTCAACCTTCATTTATTCTTCTTCAGCACAAGGTAGATAGATAAGGGACTCTCAAGACTCTTCTCCAACACCATAGTTCAAAAGCATCAATTCTTTGGCACTCACCTTTCTTTATAGTCCAACTCTCACATCCATACATGACTACTGGAAAAACCACAGCTTTGACTAGACAGACCTTTGTTGGCAGAGAAATGTCTCTGCTTTTTAATATGCTGTCTAGGTTGGTCATAACTTTCCTTTCAAGGAGCAAGCATCTTTTAATTTCATGGTGTAGTCACCATCTGCAGTGATTTTGGAGCCCAAGAAAACAAAGTCTGTCCCTGTTCCCATTGTTTCCCCATCTACTTGCCATGAAGTGATGGGACCGGATGCCATGATCTTAGTTTTTTGAATGCTGAGTTTTAAGCCAGCTTTTTCACTCTCCTCTTTCATCAAGAGGCTCTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTCCCAGCAATCTTGACTCCAGCTTATGCTTCATCCAGCCCAGCATTTTGTATGATGTACTCTGAATATAAGTTAAATAAGCAGAGTGACAATATACAGCCTTAACGTACTCCTTTCCTGATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACGGTTGCTTGTTGACCTGCATACAAATTTCTCAGGAGGCAGGTCAGGTGGTCTGGTATTCTCATCTCTTGAAGAATTTTCCACAGTTTGTTGTGATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCAGAAGTAGATGTTTTTCTGCAACTCTTGCTTTTTTGATGATCCAATGGATGTTGGCAATTTGATGTATGGTTCCTCAGCCTTTTCTAAATCCTGCTTGAACATCTGGAAGTTCATGGTTCATATACTGTTGAAGCCTGGCTTGGAGGATTTTGAGCATTACTTTGCTAGCATGTGAGATGAGTGCAATTGTGCAGTAGTTTGAACATTCTTTGGTATTGTCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCTAGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGTATATTGAGTGCAACACTTTAACAGCATCATCTTTTAAGATTTGAAATAGCTCACCTGAAATTCCATCACCTCCACTAGAAAAGACATGGGCTTTGTAAACAGCAAGACTTTGTTTTGATCCTTGCCCTACCTTACTATGTGACCTTGAGCAATTACCTCCCTGCACTTTAGTTTGCTCAACTATAAAATGGAGTTAAAATACCTACTCCAGACGGTTAGTGTATGTTTCAGGAACAGATACCTACATACTGAGGTACAAAGTGAGAGGGAACAACTTCTACCCAATATGAAATAAAACTCCTTCCCGTCAGTCTGACTGATCCAGCCTAAGTCACATGCCCACCCTGGGACCAATAACAGCCATTAATTCCATATATTGTTTGATTAGACTGACGAGGCTCCACCCCCAGAGTTGGGACCAGGCCACCTTCTCCTGAGTCACCTGCATGAATGGAAGAAAGGAAGGAGGCAATAGTCTAGGAGATGCTGGTTTGGATCAGCTGAGAGATGGTGCCATGTTTATAAGTAGTAGAAATGGGTGACCAGTTCACAGACTGCACCCGTGTTAAGAGTGTAGAAGATTCACATGTTGGTAGCTGATTAGATGTCAGTGGAGAAGTGAAAGGATAACAATATTTACTGGGATGGAGAACCCCACGGAAGTGCAGGTTGATGAATTAAAGTTGGGCCATATTGCCTTTGGAGTGAATGTGGGCGATCTAGGGGGAGAGGTAGTTAGATTGGTATATCTGGGGCTCGGGCAAAAGGTTGGAGCTGCAGAGATTGAGAGGTAATCAATATCTGAGTCTTTATAAATCCATGTGCCCTTTCAAACACAAAATCTTATACTCTGCCTTTAATGTTATTTAAAACTTCTTAGTACATTAAGTATAATGATCGAAAGCAATTCAAATGATTTACAGCACTGAGCCTGCTTCCCAGCAGACACTGATGGCCTCTGCAGGCAGGAAGCCTCCTGTCTCTTGCACCTCTGCAGATCCAGGCTGCTTGTTCTTCCCTCATCATGGCTGGGTGGCTACCAGGAGGATGCTGCACAGCCCAGACCCTGTATTCTAGCACTTTCAGGGCTGCAGTATTTCCTCTGCTGGCAGCATTCCTGGCAGACAGGTGTCCAGACAGTGCTTGGTCACCTCCAGAGTCGGGGGGCTCACGACCACATGAGGCAGGCTCTGTCTTCCAGATGGGACATACCTACCCCTGAACATTAATTGGCCCTTTTGGCTTTCTCTACTGTGTGTAGCTCTGTCCTCTGGACCGTGTGGAAAGAGGACAAAGCTGGGTGTCTCCCCTTACCAACCCCTCAGGCGTTTGTGGAAGCGGCCAGGTGTGCCTTGAGTTCCCTCTCTTCTTAAGGGTGGCCCCTTCCTGGCTTTCATAGCTGGAACTGCTCATCAAAAATCCCTGCTTCCGATTAGGCTGTGGGAACACTTCCGGTTCTGCTGTGAGAGGCTTCCGGTTGCCATCTTTCCGTGGGCCTGTGGAGCTCGAGGTGGGTAGGTTGAAGGCCACCAGTACCCCTCGTTCTGATGGGGGATTGCACTGGTTCGGATCCCACTTACATAACGCGTCGAGGTGTGTGGCCCTTGGCAAGGCTTTGGCCTTGCTGTGCCTCAGCTTCTTCGATTCCCTTGTAAAACTGGAATATGGATGATGGGGGTCTGTGCCTCATAGTTTATGTGGGGATTGGGGCCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCCAGAACTGATAGCTCTTTGACCCCTGATGGAAATGTGAGAAACACTTAGAACGCAAAAAGGGTGACTTTAGAAGGCTATTAGCCATTGTTCATAGACAGAAGTCTTTGTTGTAACAAGGAAACTAAAGCAGTAGAAATTCAGATCTGGAAGAAAACCCTGGGGGGAGTATACGGCCTTTTGTCTCATTCTAGAAATTAGGTTTTGTGATGGTATGAGAAGTTCATTCATTTCTTAGACCCTCTCTCACAAGTAATGAGCTCTCCACTCTGGACAACTTTCAAATAGCCTGAAAAAAGCCAGTTTGGGGGGATTTTAGATAGGGTTCTTGCATGCTGTTAGTGTTGAGAGGCTTCAAGGGGGCCAGAGCTGGGTGTGAAATCTTGCCTGCTTCACCATCGGGGGATCTGAAAGTCACTCCAAACATGCCTGCCACGTGACCTTGCTCCCCAAGCTGGTGGCTGACCGCCTTCCAAAGCCAAGATCTTCATTTTTGTAACCTTTGGATCTGCTCTCCAGCCCCCAGCAAGGACTTGAGTTAGTGAGTACCTGTTGAGTCATCCTCTAACCACTCATGTCCCAGTGTCTTCAGTGGTGGGGGGAAGAGGACCCTCGGGGTCTTCCTCTGACACGTCTCACGTGCCTCATTTTGCAG
Seq C2 exon
ACATCGACGAGTGTGAGAATGACCACTACAACGGGGGCTGCGTCCACGAGTGCATCAACATCCCGGGGAACTACAGATGCACCTGCTTTGACGGCTTCATGCTGGCACACGACGGACACAACTGCCTGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000011275:ENSBTAT00000037639:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF129472=EGF_3=WD(100=78.3)
A:
NA
C2:
PF146701=FXa_inhibition=WD(100=86.4)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]