BtaINT0157596 @ bosTau6
Intron Retention
Gene
ENSBTAG00000010241 | UNC5D
Description
Bos taurus unc-5 homolog D (C. elegans) (UNC5D), mRNA. [Source:RefSeq mRNA;Acc:NM_001192518]
Coordinates
chr27:31060326-31075903:+
Coord C1 exon
chr27:31060326-31060504
Coord A exon
chr27:31060505-31075698
Coord C2 exon
chr27:31075699-31075903
Length
15194 bp
Sequences
Splice sites
5' ss Seq
CAGGTAACT
5' ss Score
8.63
3' ss Seq
GTTTCTTCAACTCTGTCTAGGAA
3' ss Score
7.35
Exon sequences
Seq C1 exon
AGTGAAAGAGAGACCATCACTTTCTTTGCACAAGAGGATAGCACTTTTCCTGCACAGACTGGCCCCAAAGCCTTCAAAATCCCCTACTCCATCAGACAGCGGATTTGTGCTACGTTTGACACCCCCAATGCCAAAGGCAAGGACTGGCAGATGTTAGCACAGAAAAACAGCATCAACAG
Seq A exon
GTAACTGGGGGCAACTGCTGAAAGAGGATTTTACTAAATGAACTTGAAAAATAGAATGGGTTGGGTATATCCACGTAGTTTCCAGGCCCTGATATCTGTATGGATTCCTCTGGCCATATTTCATGTGATGTCTGGCCAAGGTAGTGGGAGAAGAGCAAAAATATGATGAGTGTGTGTGACCTTTCCCGCCACCACACTCCACCTTTGGGGATGTCATGAGAAAGTCCTACTTTGGTCCTGATCCCAACTACAACTTTGCTAACTGGGCCGCCATAATGGGGGTTTAGACTGTGTCATCTTGGTACTGGTGAGGGATCTCAGAGTCTTGAAAAGAAACCGAGAAGCAAGTTTCTCACACCTCCTCTCCCTGCTAGGGTAACCTTAAGCATTATTTAATCCCTAATAAGAATATGCTCAGGCTTCACTGGAGGCTCATTGGTAAAGAATCTGCCTGCCAATGCAGGAGACCTGAGTTCAATCCCTGGGGTCAGGAAGATCCCCTGGAGAAGGAAATAGCAATCCACTCCAGTATTCTTGTCTGGGAAATCCCATGGACAGAGGAGCCTAGCAGGCTGCGTCCATGGGTTGCAAGAGAGTCAGGCATGACTTAGCAACTAAGCAATAACAAAGGATATGCTCAGCCTGAAGAGCTGGGTGCCTGAATATAAAAAAGGAAGTTTGAGATGATACTTCCCAGGTCTGAAGGCAGAGGGTTTTAAAATAAGCAAAAGATTACGTAGGCCCCACCTGTGAGTCTGCTGCTTAAACCAGCCATTATTCGTTACTGTGCTAATGTTGTGCTTGAGTTGAAAGTAGACTAGAGAGATTCATTAATGGACTGTCTTACTTTGAGGAGAAAAAGCAGCGGTGAGTCTATTAGAGCAACTCTGATGAGGAGGCAGCTTTGGGCTCAGCGTGAGGAATGGTAGGGAAAAGGCATGGACGAATTGCATATCCTGTCGCCTTAGCCACGTCGCACGCCCTGGAATGAAAAGAGAACAAGTTTTTTCAGCGCCATTTGCTTTCTCTTCCCTTTGTGTCCCTCCCCCACTCCACTTTGGAGACAAAGCCTTGTTTTTCTTACTGTTTGGCTTACTCTCTCATTTCCATTTTTTGTTCTTTGTTTTTACAGACATCTTACCTCCCTCTCTCTTCTCTGAAAGGCAGGTAGATGTCTGCCAAGAAAGGATAGAGGGCCATTCCCTGTTTCAAAGGGATCCAGAATCCAAGAATGAAGGGGCCAACTAGAGAGCAGTCAGAGAGGAAAATCAAGAGAAAACAGAACTGACAGAGACAGGCCCGAAAAGAACACATTCTTGAAAAGGCAGATATTGAAAATGAGAAAATACAAAAATGTATGCATGTGCAGGAGAAAAAAAAATTAGGTTGAATTTTTCCCAGCAACTTTGATAAAGGATGAGATGTGTCATGTATAACTCATGAACACTATGACTATGACAGTTTCACTTTCTGATCAACGCGGAGACAAGAATGAAAAACTTACCCAGACAATAGAACGTGGTCTAAAAAAAAAAGAAATGAACTTTGGGCAGGGACTCAAAAGCTCTGTACAGCAGTCCTGGTTCTACAGCTAATATGTCTGCCCCCCACACATCACTGACCACCCCTATAATACTTTCTCTACAGATGCAATTCATAGAATTCAAACTACATTAACTCTCTAATCCATTCTGGCAGTAAGAGTTTATGATTTTTAATTTACCATTTACAAGAAAATAATTGCCACAAAATATCTACATGCCCATGGATGCTGTCATTAATTTGCTAAATGAGCATGTGCATGTCCCTGCCTTGTTCATTTTTTTCTCCACTTAAGAGTAAACACATGAGAACTACAAGGACTGCCTCCAAAGTCATCAATTTCAGACCTTTTACAGCAGCGAAAATGCATCTCAAACTGGGAGACTAACGTGGACATCCTTTTGTGTCTGGGCTATAATGAGCAGTAACAGCTACACAGGGGCACGCTGTCCCCTCCAGTGTCAGGGTCAAAACACAAGAACAGTTGATGTGCCTGTTTGTTTTTGTTTGCTTCTGTCTCTCCTTGAAAACCCTTTCTCTAGGAAAGCCTAAATGTCCTTAACATCCAAAATTCAAACAATCTACTCTGGAAAGTTTCTAACAGAGTTTCAAGAAAATCTCCATTTTCAGTCAGTTTTAGTAAGTGTTAGTCACTCAGTCATGTCCAACTCTTTGCAACCCCACAGACCATATAACACACCAGGCTCCTGTCTCGATGGAATTCTGTAGGCAGGAATACTGAAGTGGGTTGCCATTTCCTTCTCCAGGGGATCTTCCCTACCCAGGGATCAAAATCAGGTCTCCTGTATTGCGGGTGGATTCTTTACCACCATCTGAGCCTCCAGGGAAGTCTGAATATATATATATGTAAGTGTGTGTGTGTGTATATCTATTTATCTATATGTGTGTGTGTGTGTGTATGTATATATGTGTATTTATACACACATATATGCACACATGTGTATACGCATGTATACACACACAAACACACATATATATCTTCTCCAACATGGGAAGTAACGTGACAGAGGTGAAGGATATTTTCAGGTGTCATTGGTTAAAACTTCTTGTTGCATAATCTGAAATCACTGATCTCACTCTCTTCAGTTCAGTTCAGTTCAGTCACTAAGTCGTGTCTGACTCTTTGCAACCCCATGAATCGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGTTCACCCAGACTCATGTCCATTGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTCAGCTCATTCTCTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTTTCCAACACCACAGGTCAAAAGCATCAATTCTTTGGCGCTCAGCCTTATTCACAGTCCAACTCTCACATCCATACATGACCACAGGAAAAACCATAGCCTTGACTAGACAGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACCTTCCTTCCAAGGAGTAAGTGTCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGGACCCCAAAAAATAAACTCTGACACTGTTTCGCCATCTATTTCCCATGAAGTGATGGGACCAGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCACTTTCACTTTCCTCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTGTCATCTGCATATCTGAGGTTATTGATATTTCTCCCGGCAATCTTGATTCCAGCTTGTGTTTCTTCCAGTCCAGCGTTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGATAATATACAACCTTGACGTACTCCTTTTCCTATTTGGAACCAATCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTACACTCTCTTAGGGTTACAAATAATAGAGTCCTTATTACATTACATAATCATCAGTTGCTAGTGTGATCATTAATGTGTGTTAAAACACAGAAATCTGACATTGTCAACAGGCCAATATCATTGGGTAAGAAAGCTGTTCTGTAGCTTGAGATTTCATCAACCCTGGTGTCACGAAAGGTCATCACAGAGTCACTCTTCGATTAGGAAATTCACCTACCTCTGCCTTGTGACAGCATCTTTACCTGACTCTCCCCTTCCTTTCAATTTCCAAAAGTGAAAAGCTAGTACAGGAACAGCCCTCAAACCGTAAAGGAAACATTTCAAACGGAGTGGAGAGAAACAGTGGCTGTTATCATGTTGCCAGTGAAAACATTCTCCTCCTTTTGGTAAATGCAAATGTCACTGATGATAATTTGCCTTTTTGTCAAACAAGTGTCTACTTAGATCTGAATAGGAAAGAAGATACATGAACTAGTAAGTTAAAGGCTTAGACTGTGAAACATGTTGGGGGGTTGCAGGGGGCGTGCTGTAAGACAGCAACACAGGTGGCCTTGCAACTTGCCTGGCATATGGATCACGATAAATAAGCCACACAGCCCAGCAAAGAATGTCATAGTTAACAGCTGCAATTACAGATTCTGTGAGCAAACTATTACTCAGAGTCCATACTTATTGCATTTTCAGAGCTGAGATTGCACTTTTATTCTACAAATCCAGCTGCAAGAATTCTTCACTTAAATGCTCTTGGCCACAGCTGATTGGTAGGTGGGTGGGACTAATAAAGAATTGATCACATAGGAGTAGAGGGGAGGGACCTTTGCTGAGAACTAAACTAAGTAATATCAGAAACTAACTGCTTCAGCTAGAAGTACTCACCCGTATTTAAATTTCCATAGCATTTTGTATTTTTATGATACTTTTTAAAATTACAGTTAGATATACCTAGATAGTACTATCTACTTCTGGGAAAATCAAGAAATTTGCCCTGAATGAATGACACGAACTTTTTCTTTGGATAGTATGCTGTGCTGTGCTTAGTCGTTTCGTCATGTCCGACTCTTTGCAACCCCATGGACTGTAACCCACCAGGCTCCTCTGTCCGTGAGGATTTTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCTTTCTCCAGGGGATTTTCCCAACCCAGGAATTGAACCAGGGTCTCCTGCATTGTAGGCAGGTTCTTTACCAGCTGAGCTACCAGGGAAACCTTAGGATAGTATACTTGACCGTAAAATCTTGCCTAATAGAATTGATATGAATAAGCATCAAAGGATTTTGAAAGTTGGTCTCAAAAGAGAATTTGGCTATTATTATGGAAGATTCCTGTCTTTCCCCTCAGTACCTGAAATTCTACTATTAGGTCATTCTTCTTTAAGACTTCATGATGATCATATTCCAGAAATCCTTGTGAAAACACAGCAGCTTGACCAAGTTGCTATGGGAACAGATGCTGGATAAAGTGCGTGAGATACAAAAGGGTGAGGAGAAGGGAAGTGGCCAGAATGGAAGAAAGGATTCCAAGATGAAATGGAGTAGATAAATTACTTTATTAATACTTTCTCATAATAGTATCCTTCTTTGAAGTACTGCTGGAGAAACATATTGCTCATCAGTCAGCTGTGTGTTCAATTGTACTTTGGATGTTAATGTTTTTAGATGATGGTGTAGAAACTGCAAGCAAATGACATTTCTCAAGCCTCGTGGCTGATCAGAAGTGCTATGATAACTTGTTTTTCCACCAGATCTTTTAACAGGACCTCTAATGAGAAGCAGAATCTTCTCACGTTGAGGTCACATCCTTCTATTCCCTCTGCCCACCCTGTTAATTGGATGCACAGGAGCAATGAAATGGCCAGAGGGCAGTCGGGAAGGACAGAGGAATGTCACAAGACAGCTTATTAATCTATCTCTGAATAACTTGAGAATTCACTAAAAGTGGAACAGGCCCAGTGCCAGCTTTCTTTGGGGTTAGTAAAGGAAGGAGGAGGAGAAAAGAAAAAGAGATTACAAAATATATACAGAATGCCTGCTTCACAGCAGACTACCAAGTATGGTCACTCAAGGACCCGTGAGACTTTATTTTCACTCTTGTGTTGGGGGATTTGCTAGGATTCCACCAAATGGAACTGTCTGGGTTTTGCAGGCTAGCGGTTAGAAAACACATCCTTAACCCTTAAATGATCAAGACAGTGTGAGGCTGCCATTTCAAAAAAAAAAAAAGCAATCCTCATAACTCTAAGGAGAATTAATACATGGGGAGATAGCATTCATGACACAGGTCCTCGGAGGCAAAATATGATAAACCTCAAATCACATTTTCTGGTTCTGGCCCAGTAGACTTTTGCCGAGTCTGACTTTGAAGAGCCTTCAGTGAGAAGCCAGAGAGACCCAACACAGCCAAGTGGTGGGTGTTCAGGCTTCGTTCCAGTTAAGGCAATGATTCATGAAACTCCCTACTAATAGGAATCTGAAAACAGCCTGGGGCCAGTTTAGCCATGAACAAACCATACATACAGTTTGTAGAAAGAAAGAAAGTGAAGTTGCTCAGTCGTGTCCGACTCTTTGGGACCCCATGGACTGTAGCCTGTCAGGCTCCTCGGTCCATGGGATTTTCCAGGCAAGAGCGCTGGAGTGGATTCCCATTTCCTTCTCCAGGGGATCTTCCCAACCCAGGAATCGAACCCTGGTCTCCCGCATTGCAGGCAGACGCTTTAGCGTCTGAGCCACTAGGGAAGCCCATACAGTTTGTAAGCGGCAGGTTTTTCTGCTAAAGGCAATATGCGAGAGAAGCTGTTTCTGCCCCTCCCAGAGAACCAACAGAGAAGGCAATGGCACCCACTCCAGATTTTTCAGCGTGGAAAATCCCATGGACGGAGGAGCCTGATAGGCTGCAGTCCATGGGGTCGCTAAGAGTCGGACGCGACTGAGTGGCTTTCACTTTTCACTTTCATTCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGGATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCTTCTATGGGGTCGCACAGAGTCGGACACGACTAAAGCGATTTAGCAGGAGCAGCAGAGAACCAAAGTTGTGCTCCCACTCTAAGCTGCAGGAGTGGTGACAGGGGCATTGTATTCCTTTCATGCAAGGGGTGAGTTTGCACTGGTCTTTGAAGGACTAAGTTTCCCTTCTTTCTTTAGTCGCTAAGTCATGTCTGACTCTCTTGTAACCCCAGGGACTATGGCCCACCAGGCTCCCCTGTTCATGGGACCTTCCAGGCAATAATACTGGAGTGGGTTCCCATTCCCTTCTCCAGTGGATCTTCCTGACCCAGGGATTGAACCCACGTCTCCTGCATTGGCAGGTGGGTTCTGTACCACTGAGCCACCAGGGAAGCCCTTCCCTTAAGTTAATGTAATTTTCAAAAAAGATGGACATGCCCAAGCCCCTTTATAGTGGAAATAAATCTCTTTGTGGGTTCATCTCAAGCAGTAGTACAAATGCTGACAAAGTCAGAATCCCTGGATTTGACTGTCTTCATAATTGGAGAAAATGAAATTATGGGGAGGATTTTCCTAATTCATTAAAGAATCCTTTAATAAAGTACGTAACTATTTCTTTTCAGTATGTGTGAAGATTTAAACACATTGAGTATTTTTCAAACGGAAAAGTATCAATATTTCTCCCTTTCCCCCTTCAGGATTAGTACCATGGTCTTTTATCTTGGAACAAATAGTGGTCTTTCTCCTCTACCCTCAGGATTCTTGAAAATATCTCAATGTTATGGAAGAGAAACTTTAAATGAGACATATTTTTCCACGCTATATCCCCATTCAAAGAAATTTGAGATTTGCTTTTGCAGTTTTCACTGCCATTCATTGCCAAATATGAGAAATTGTCAGAGGCTTATAATGAATGAAACTGGAGAGCCGAAAACAGAGTCTACAACTGGCTTTATTCCTTTTGGCAGCTCACTGGGGGTCCTGAAGGCTCCAAGGCTTAAATCCATTTTCTAAAGAAGGAAGAATCCTTGCTAGTCCCTTTCAGGAGCCAGATAATGGAATAAGCAAAAGGAAGAACTATTAATATTAATGTTATTGCCAAATTAATTGGCCCAAAATAATTAATGCACCACCCTTAGGGCACAACAGAGTGGAACTCAGCATGTTTTCAGTTGCCTTTATGTTTTCCTCTTGGGTTCCCCATACCAGCTTCCTTTCTTGTGAAGGCACAGGGTGGAGGGGGACAGTGGGAAGCAGGGAGAGGCAGAGGTGACATAATGATGAGCATCTTTTGCTTATTCTATAGGAAGTGAATCAGACTTGATTTATCCTAAAAGCAGCTCTGCTGTTTGAGTGGCCAGTGAGGATGAAGTTTGGGGATGAAAGCTTGATGAACTGACCAAATGCTTATGCTGTGTCCAATTACTGTTATTCAGTATAAATGGTTTTTCTCTTCTATTTGCATTTAAAGAACCATATGGAGGGCTGGTTTTGGTCACATAAGAGGTTTTCATTAAATGAGACAATTAGGATGATAGCAGGGATATTAATATTTTTTTTCGTTATGACTATGTTTCAATTCCCTGTTTGGTACTATACCGTAGGATTATGCACCATTCTTGTAATGATGTCTCCCAATTTATTATAGGCAGCTTAACTTAGTTTTCACTTTGTATGTTGCCAAACTGCTCAGATGATATTTTTTAGAAAACGTTGACAAAGGTATAAATGGCAATGGTTTATAGAATATAAACAAATTTGTTGCCTCAGTGTTACAGGTGCGAGTGGTTCCCTGCTACTTGGAAGTGTTGAATGACACCCTAAATTCTGCATCAAAGTATTACATGTGCCTGCGATGAGGCATCTTCTGTGCGAAAAGATGTGAAGCTGCAGCTCACATGTGGTCCCCTGCTAGATTCATTCATTCTCACAATTAGTTACAAAGAAGAGCTTACAGCTTTCAAATAGGCATATCAGCCCCCTGGTAGCAAGGCTCTGAGTCGCTAAAATAGAGGCTTTGTTATCTGAAATTCAGAATGAAAGGCAGTCCCTCATAGGTCACACATAGTCAGATAGAACTAAGATGCTAAGACAGGCGGACTCCAGCTTTAAGCACACGTGCCCTGGGTAGCTCTTTCTGCCTGTATGTCCCCAGGGCTCACACACAGCCTCAGACCTGCGCCTCCTCCATTACTGTTATCTGATCTTTCTGCTAACTGACTGAGGATTTAGATGTTACTATTCCCTAAGATGTTTGTATTTGAATACTTCTTTCAAGTACTAAAGAAAGGGTGGTATCTTTCGATTCACACCAGACACCTAGACACTTTTCCTTTTCATAAAATGAGCCCTGGGTTGCAACAGTAAATGGCAGAATTTTATCATTAAGTCCTCAATTCTCTCCTCCTCTCTGTACCCAAAATGGGAAGAGAAGGCACAGTAACTATTTCCAAAAATTCTCAAATCTAACCTAATTTCCAACTAATATGGTCATTAGTTTGAGGCTGTATTTTGAAAACTGAGATTGTATATTAAAATTTGGTGGTTGACCCATATACACCATTATAAGTTGGCCTGTGTCTAAGTGGTGAAATTGCTAAAGATTTATGTTCTCAATTCTGCTCTGGCTTCCACATAAAGAATGGAATTTCAATCGGAGATGAGGGACAACAGGGTAAGGAAGACTCAGGAAGATGAAATTAATCATAGTAATAAAACATCTCCTCAGAAGCTCAGGCGAATAGAAGGCTTGTAGGGGCAACAAATGGCACCCGACTCCAGTACTTTTACCTGGAAAATCCCATGGACGGAGGAGCCTGGGGGGCTGCAGTCCATGGGGTCGATGAGGGTCGGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCACGCATTGGAGAAGGAAATGGCAGCCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTATGGGGTCGCACAGAGTTGGACACGACTGAAGCGACTTAGCAGCAGCAGCAGGGGCAACAAAACAAAATTAAATAAACTATTACTATTTAATGAATGTACATGGATAAATCTATCTAGGTGTCTTAGCATGTACTTTTTACAGTTTATCTGGCTTCTTTCAGTGAGAGTTCCAAAGGAAAAGATGAGGCCATTGAGTCTACAGGATTTAGGACAAATTAATTGAAGACACAGGGTAATTCTAAAGTAAATTCCTAAGATTTAGAGTTGATAATCTTATCTATACAGTATGCAGGGCTTTCCTGATAGCTCACTTGGTAAAGAATCCCCTTGCAATGCAGGAGACCCTGGATTCCTGGATCAGGAAGATCCACTCAGAAGGGATAGGCTACCCAATCTAGTTGGAGAAGGCAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTAGGCTGCAGTCCATGGGGTCGCTAAGAGTCGGACACGACTCAGCGACTTCACTTTCACTTTTCACTTTCATGCACTGGAGAAGGAAATGACAACCCAATCTAGTATTCTTGGGCTTCCCTTGTGGCTCAGCTGGTAAAGAATCTGCCTGCAATGCAGGGGACCTGGGTTGGAAAGATCCCCAGGAGAAGGGAAAGGCTGCCCACTCCAGTATTGTGGTCTGGAGAATTCCATGGACTATATAAGTCCATGGGGTCGCAAAGAGTCAGACACGACTGAACAACTTTCACTTTCACACAATATGCAGCATCTTTATGACACCACAAAAAAATAAATATTATTTTTCAGAATTACCTTAGTCAATCAGAATTTGAAAAGCCTATGACAAGAGGTTCAGTGCATAAAAAAGTAACAATTTGAAGCACCTAAGACCAGCATAATAAACATTGACTTCTTTAAACATTTTTCAAAGAGAAAGGAAAAAATTGTTTTGTTTGGAGTCATCCACCTGAATTTCAAGATGTCTGTTTTTTCCAAATGTTCCTTTTTCATTTCCAAAAAAAGGAAAACAAAGACACTCAGGAAATCAACTATTGCCATGAATTCTATTTTCTAGTATTAGCAGCATTTCCTGAATCATGTGTGCATTTATCTGCTGGTGTTCAAATGTACCAGCATTATTATAAAGAGAAATGGGTCACACAGATTGGAATCAAAATAATTTCAAAAGGGAAGTAGGAAGATAACCAAATGGATATATGGTATACCCATTTTCAAAAAAAAAATCATAATACATTTATACACATGTAAGTGGTAAAATGGGGTTTCCCTAGTGGCTCAGATGGTAAAGAATTTGCCTGCAATGCAGGAGAACTGAGTTCCATCCCTGGGTCGGGAGTATCCCCTGGAGAAGGAAATGGCAACCCACTCCAGTATTTTTGCCTGGGAAATCCCATAGACAGAGGAGCCTGGTGGACTATGGTTCACGGGGTCACGAAGAGTTGGACACAACTGAGCAACAAACACTTAAGCAGTGAAATAATCCAGCTATCTTTGAGAAATAGTCTGTATGTCCCCAATCTTTTTTGGCACCAGAGACCAGTTTCATGGAAGACCATTTTTCCGTGGATTGGGGACAGGGGGCAGGGGATGGTTTCAGGGAGATTCAAGGGCATTACATTTATTGTGCACTTTATTTCTATTATTGCATCAGTTCCATCTCAGATCATTGGGCAGCAAATCTCAGAGGTTAGGGCCTCCTGGCCTATAGCAGTAGCACTCTAGGGTCTTTTGTCTATTAATTATCCTGAGGTAGACAGGTAAGTAGAGTTTAATAGGATGTCTGTTTATCCCAAAGCTGACTGAATCATTTTTAATAAGGCTGATATGCTGCTACATGTATCTACTAAAATTAAGTGGAATTTGAGATTTGTGTGTATTGCCGAGTGTACTTGTATAAATTGAGAGCGTCAATCTGAAACATGCTTTGGGGAGCACATTTTACTTGCTACAATATGCTCAGAGATCCATGCCAAGGGAGAGTTCTATTTCTGCCTCTTTGATCATTTAGCTTCCTGTAGCTCTGGGTGCCTAGTCTGCACATCGGGGCATGTGCAGGACTTCTGAGAACCCAGTGCCTGACAAGACTCATCCTGCAGCTTTGCTGTTCTTCCTCCAGGCAGGTGTGCTTATAACACCTTCGCACCACAGCAGCATCTATGAATATTCTGAACGTTTTTTGGGGACAAGGATTAATCCCAACCTCCAAAACATATTTTTATGCCTCTCCTAAAGTTTTGTTTTTACATTTCATGCCCAGATCATCTTCTCATGTCAAACGTCAAAGCTTCCCCAGCAGTTACCAAGGATAAAGATCTCAGAGTGGTTGGAACAGGACATGTAGCTCGGGGACCCCAGCAACTTCAACCCTCTAGGGCTTATTTTCAGCACCAGATGAATATTCAGTTTCATCTTCTCTCAAATGGCTGCTATATCTGCAAGTCTAGTTTGGGTTAAAAGACAACATGGGACGTGATCGGCACCATGACCTGCAGGCCAAACCTGGCCCAACACCTGCTTTTCTAGCCCCAGAGCTAGAATGGTTTCAGGAGAATATGCAAGAGTGATACGGTGTGACATGTGAAAACTATGACATTCAAATTTCAGTGTCTCTATAAGTAAAGTTTTAATTGGAACACAGTCACGCCCTTCACTTACACTTACACATTGTCAATAGCTGCTTTCCCACTGCCATGGCAAAGTTGAGTAGCTGTTGTAGAGACCAGATGTGGTCCCTACAGTTAAAAATATTTCCTCTCTGGGCCTTTAAAGAAATAGTTTGTCTAGAATAACTGGTATAGAATATACCGGTAGCTGTGGGGTTAATAGGATCACGAGGATTCCAGTGACTCCCCCAGACCTGAGTCCATTATTCATCAGTAGCAAATACAAACTATAAACCCTCAATAATATGAGAAATGTGTACTTCTTTTTGTGGTGCTTGCCAGCATTTGTTTTCCTTTGAAATGACATTGGAGAGCATACAGAATTATTTCCCCCATGTCAAAATGTGTGTCGATGGTCATTCTCATAAATTACATAAATAAAAATTATTACACAGCCCACCTAGAATCCAGTCACACCTAGTCTCTCCGTTTTTGCCTCTTTTTCAGCTATTTCTCCAGATTGTATTCTGCTTAAACACTGGGTGGGATGTGCCCGTTTATGTATAGACCTGGAGATATAGCACCTTTCCCCACAAACAGCTCCCTCCAGGTAGGAGGAAGTGGCAGAATTCAAAGCAACATTTTGAGTAAAAGGAACCAGGATCACTTCAACTACAGAAACAATATTTGCTTTGCTATTTCTATTAGTGTAGAAATAACTATACTGGATTCCAGGGCCAACTATGGGGGGGTGGCAGTGGTAGGAAGAAGGAAGGAAAGAAAAGATAAAAGGAAAAGAAAGTAGAATTATTTTTTAATCTGGGCTTCTCCCTCTCTCAAACTAAGATTAAGATGTACTGGAAAATATGTTATACCCTGATATTTGTGCTATTTGGCCATCAACTAGCTTTAAGTAGTCTCTTAAGACTTTTGCACAAAATAGAACTTTATTCACTCAGAATTACTGTGCATGCATTGCTTATAAATGATAATGTGCCCTTAAAAACTTGTCTTCTCTTCCAACTGCTCTTGGCTATAGGAGTCTACTTTGTGATTACACACTGAGTCTAATGATGGAAAGTCATACCATCTTCAAGATAGGCAAATCTTGGTTGACTTTGGGAAATCTTTTCAATTCATCAGAATTTTACCGTGACATTTCTATCCCTGCTGTAAAAGTACCTCTGAAAACCTGTGACCTTCAATGCTCTGTGTGGTCTCAGTCTTCATCAGAGCAAAGTTATCGTCCAAAAGGTTATCATTTGTTTTCACTGAAAATCTCATATCATCTGAAACAAGCTCCAAGCAATCAATTACTCAGTCGATAGATACTGAATAAATACCTGTCACAGTATTACAGTAAGTGTTGTTGCAGAATCAGAAAATGATTAGCTATGGCCCTTCCAAGTGTCTGCAATCACACTGAGAAGGCAGAGCTCACAAGCACGGAATATATACATATGCATAGAAAGTGAAAATGAAGTCGCTCGGTCGTGTCCGACTCTTTGAGACCCTATGGACTATAGCCTACCAGGCTTCTCTGTCCACGGGATTCTCCAGGCAAGAATACTGGAGTGGGTTACCATTTCCTTCTCCAGGGGATCTTCCCGACCCAGGGATCGAACCCAGGCCCCCGGCATTGGAGGCAGACGCTTTAACCTCTGAGCCACCAGGGGATTCTCCATACATATGTATATATATACATATATATATATGAATTTTACTCACATGAAAATGTAAGCAGAAGCATAAAGAGAAAAAATAATAAATCACTTTGAGCAAGGAGATGAGAATTGTCTATAAGATGTTACTAAAAAACCTGAATGAACCTTCTGGCCAACCCAGCACAATCCGGGCCTTGTAAGAGTGTAGGATCTTCAAAACAGAGGGGAAAGAGGGAAAGTGGGCATTTCCTAACAACAGAATTTACTGGATGAAGGCAAGGAGAAAAGCATTACCTCTGTCAGCATTAATGGCTCAAAGGAAAAGAGAATATGGAGGGAAAATACACATAGCCATAGCTAGGATGAGGCCAGACCAAGGCAGGCAGTGAAAGCAGGTGGATACCTGATGACTGAAGAAACAAAATACAGGAGATATTAGAGAGTTTGGGGCTATAACAAACTGGAAGGCACTTGCTTGATTCAACTGTAAAAACAACAGAGCATAAATAATGAAGCTGCTGAGTTTGTCAGAAGGAAAGAGAAGACTCAAAAATAAATGTCCTAGTGTGAGAGATTAGAAGAATAGCAGTAGTTACTGGGGTTTTTTTTTGCTTTTTTGATTCCTTTTTTAATTGGTAAAATATTTGTTATTAGAATGGGGGCCAGTGGGAGGCGTGGAGATTATACTGATTCCTGACGCACTGAGTCTGAGGAGGAAGATGGATATCTAATTGGAGCAGTCCCTCGGTCATTTAAAAAGTCTGTCACTGGTTCACATTAACTTAGAAGACAGGAGGTGCCTGCCGATTTAGACACTGTCCACTTGGAGTTGATAACTAGTCCATTTGGTATATGAGCCCAAGGAATCACAGATAAAATCTTGACAGCCCTTATGTTCACCGTGGGAGGCATAAAGAACTGTCAGATATTTTGAAAAAAAAAAAAATAGGAGTTATATCATCACATAAGCTAGTGGAATAGAGCTTTTTAAGAGGGTGTTCAAAAGAGAAACACACACACACAACTCAAGGAAGGTGAGGACTAAGACGACACTTATAGGATAAGAAGTTCATTGGAAACCCTCCAAAAGCACAGTTTCAGTTGAATGATCTGATACAAACTAGACCATCCCCAGGTCTACTTTAATGGGGCTCTGTAGTCCTATCAAAATAATAGCTATTACAGTTCATTTCTAATTCCCTTATAACTATCGTATGTGTTCCTTTATTTCTGTTTGTCTTGTCATTTTGTTTCTTCAACTCTGTCTAG
Seq C2 exon
GAATTTATCTTATTTTGCTACACAAAGTAGCCCATCTGCTGTCATTTTGAACCTGTGGGAAGCTCGTCATCAGCACGATGGTGACCTTGACTCCCTGGCCTGTGCCCTTGAAGAGATTGGGAGGACACACACAAAACTCTCGAACATTACGGATTCCCAGCTCGATGAAGCCGACTTCACCTACAGCAGGCAAAACGGACTCTAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000010241:ENSBTAT00000039849:16
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.033 A=NA C2=0.029
Domain overlap (PFAM):
C1:
PF0053117=Death=PU(34.6=45.0)
A:
NA
C2:
PF0053117=Death=PD(64.1=72.5)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]