BtaINT0165381 @ bosTau6
Intron Retention
Gene
ENSBTAG00000020601 | ZNF366
Description
zinc finger protein 366 [Source:HGNC Symbol;Acc:HGNC:18316]
Coordinates
chr20:9079815-9090912:+
Coord C1 exon
chr20:9079815-9080006
Coord A exon
chr20:9080007-9090737
Coord C2 exon
chr20:9090738-9090912
Length
10731 bp
Sequences
Splice sites
5' ss Seq
AAGGTGAGC
5' ss Score
9.6
3' ss Seq
CCTGGTCACTGTCTCGACAGCTT
3' ss Score
7.88
Exon sequences
Seq C1 exon
GGCGTGAAGGAGCACAAATGTGGGATCTGCGGGCGGGAGTTCACGCTGCTGGCCAACATGAAGAGACACGTGCTGATCCACACCAACATCCGTGCCTACCAGTGTCACCTCTGCTACAAGAGCTTTGTGCAGAAACAGACCCTCAAGGCACACATGATTGTCCACTCGGACGTGAAGCCCTTCAAATGCAAG
Seq A exon
GTGAGCAGGGGGCCTGGGGGAATGCGGAGAGGAAGGGCTCAGCGCGTGTGCGTGGTCAGTGGTGGTCGACTCTTTGCAACCCTGTGCCCTGTAGCCCGTCAGGCTCCTCTGTCCATGGAATTTTTCAGGCAAGAATACTGGAGCAGGTTGCCATTTCCTACTCCAGGGTATCTTCCTGATCCAGGGATCACACCCACATCTTCTGAGTCTCCTGCAATGGCAGGCAGATTCTGTACCCCTGAGCTACCTGGAAATCCCGGGAGAGCTCAGAGGGCTCTGCAAATGCGGGGGGAAAAGTCTCCAGGGAACCTTGTCCTCAGTCTCCTCAGAAGGGCCTCTGAGGCTCAGCGTATGTCTGCGGCCAGACCCAGGCCATCTGCTGTGTCTCCACCACATCTGTGCTCAGCTGTGCCCCAGGAGTTGCCCTGCTTGTCTCCCTGTGGAATCGGTCAGTGTGCAGGGCCTGGAAGCAGCCAGACCCGGGAGAGCTGAGGGTGGAAAATCCGTTTGGAGATTGAGGTTTTTACAGGATGAAGGTGATGTGGAGGGCTCCTGTTCTAGAAGGCAGCAACCAGGTGCAGCCCTCTTCCCCTGACAAGCCAGAGACAACACAGAGAAGTCAGAGAAGCTTCCAGCCCTGTCTGCTTCCCTTCCCCTATACCACCCCCGCTCCCGCCCTCCTGACACTTGGACTGAGCAGTGTAATTTGAGGGTAGGTCTCCTGGAGGGGATGAAAGAGGTTTAAAGGTTAACCCCTCCTGTGACCTCAGAAATGCTTGCTTGGGCAGAGGAACAACTGAATGCTTCTTGTTTATTCCTGAGTACCGTGGAGCATCTTTGTTACCGTCCCTGTGTCGCATTACCTTGGTGGGGTTTTTATTTTGTGTGCTGAGATAAAGTGTGAGCTGGAGACTTGTCAAGCCTAAGGCACCGGTGGGCACTGCTCAGAAGTGCTCGGGGTGTCCAGGCTGCCCCGTCTTCCCATGTTGTTCCCACTCCTCAGGAGGAGAAATCTCGCTTAGGGTTGGATAGTTTGACTCAAGGAAGGTACTGACAAGTGACCCCACAGCCATGAAGGGAGGGCTGAGAGGGGAGCAGAGGGAAATCACGGAGTTCAGATATCATTAGAGCCTTTCTGTTTGAAGTGGCTGTTCCTTCTGTGCTGTGTGTCTGACAGAGTCCCAGTGACTTTCTCTGTCGATCCCTGTTTCTGGAGTAGGGTTCCCTGCTTCCAGGGGCTGTTGCTGCCTTCATCCCTCCGCAGTATGTACCCCCACTTGAAGGAACCCCCTGTGAAGCTGACTTCTTTCCTGTGCTGGCCCCTCCTGGACGGGGTGAGAGGGGTCAGGAGCCAGAGCTTCCCTAGACCTGGTGGGCATTCTCCGGAGGTAGGGGAGGGAGGGGTCTCCCTCCAGCCCTTTTCCTGCCACCCACTTGTGTTTCCCCTGCTCTCCTTCAAGTTCCCAGTGGTTTGAAAGTCAGTTTATGTCCATCTGGAGTGATCTGAGCTGAAAGGGGAGGAAGCTGTATGCAGAACGATGTACATAATTTGCAGGGCCTGGTGCAAAGTGAAGATGGGGGCCCCTACTTCAGATGTTATTCACAATTTCAAGATGATGAAAGCAGAGCATTACACCAGACCCAGGACCCTTCTGAATTCAGGGCCCCATGTGATCGCATGGGGCTCACACTCATGAAGCCGGGCCCAGCTGCACGAGCCTGTGGATGCCACAGACCAGCTCTTGTCTCCCTTTAGACATGCCTTGGGTTCCTTCCCACCTCACTGAGTCTCTTGAACCCTTCACTTTTTTTTTTTAGATTAAAAATTTTTTTTTCTGGTCATGCCATGCAGCATGTGGGATCTTAGTTCCCTGATCAGGGATAGAACCCCTCGTCCCTGCATTGGAAGTGTGGAGTCTTAACCACTGGACCACCAGGGAACTCCCAAACCCTTCACTTTTCACAGAGCTGTTCCCACCCTCCTGGGGTTTACTGTCTGCTACAGTAGAGGTGCCATCAGGGGCTCATTGCCCCTCTTCGTTCCTTGTACCTCTCTTCATTTCTTGTGCTGAGTTTACTCTTGAGCTTCAAGGAGGAACTGTATTTTTATCTGCTGGTGGCGGAGCACACGAAGTTGTTAAAATATGCAGGTGCCATTGCATGGTTTGCAGTCCCCTAAAAATCCATGTTCATGCAGCCCAACCCCCTCCCACTTCACCAGTTCAGGGCCAGCTGTAGCGGTTAAACCAGCAAATGTCTCTGAAATGGAGGGATATGATAAAGCAGAGCCAACTCAGGAAAAGGGCTTGCAGGCTGTGTGTGATTTGGGGGCACAGAGGCACTTCTGTTTCTGTACCTCAAGGGCCTCAGAGGGGCACAGAGGATCTGGGACCAAGGGTCCCTGAGAATTCAGACGGTTCTCCCTGGTACCAGGGCACAGAAGACCGGACTCGATGGGGCCAGGGATGCAGTGAGCCAGGCCTCACTCACCCTGACGGTAGAGCGCCACACGTGCTTCAAGGGTATCAGCTGGTCAGCTGAGAAGCCCAGTCGGACCGCTCCTTGACGGTGGATAAGGCTCCAGATATCTGCTCCAGATATCTACGTGATAAAATCCCATAAGAGAGGGGCTTGAAGCGTGAAGTGCCAGCTCCTATATGAGGCAATGGAACTTCTCAGTGGGAGGTGGGCTTGGCCATCTGCAAAGGTCACTTCTTTCTGGTGAGCGGGTCCTCCAAGGAGACCACAGGGGGTTGGAGGCTGCCTGGAAGGGAGTGTCAGTCATTTAAACAGAAAGGCCTGGATGTCAGAGTGTATGTTTGTCCAACTTAGGTGGCCCTTCTCCGTTCTTAGACAGTTCTGACACAAGATCGGGTGTGAGTCGCCTCATCTGGAGCGCGCACCTCCCGACAAGGGCGGACGCGCTGCCAGGCTCTCCCTCGCTTTGTCTGCGCCTCCCTGCCAAGTGCCGCCTGCTTGGTGTCTGCATACCTTCACTCTCTTTCATCTCAAAGGAATTTCAGAGCATGTCTGAGCACGTCTGAACGTACAGATTATGTAATGAGGGCATGTCTGTGTGTCTGTAGACTGGTTCCAGACACCACAATGGGATGGGCCACCTCCAGATGGTGTCCTGTGACTTTGCTTCTTATTCATGTCATGCTGGACTCTTGGAAATCTGGTCCTGGGTGGGGTTTCTTCGGGTCTGGGAGTTGGGAGAGGAACAGAAGGCCATTTGCTCATTGCCATGCAAGTCACACCCCTCTGAGAGGAGCGGCTGGCTGGCTGCATGGTGATGCTAGAGCACAGGCCTGGACAACTAAACCTGACCTTTATCATCAGGAAGGGTATTTCCCTTTATGTGATTAACATGGCTGGAAGAAAAGAGGCAGAGCTTGCTCCAGCCATACTCCAAGAGTTTACTCTTATCTGTTGTTGTTCAGTCGCTCGGTCATGTCTGACTCTTTGTGACCCCATAGACTGTAGCCCACCAGGCTCCTCTGTCCGTGGGGTTTCCCAGGCGAGAATACTGGAGTGGGTCGCCATGCTCTCCTCCAGGGGATCTTCCCAACCCAGGGATTGAACCCACATCTCCTGCTTTGGAAGGTGGATTCTTTGCCACTGAGCCACCTGGGGAAGCCCTGACTCCATCTCCTTTACCCCAAAACTTGCAAAAAAAAGGTGTGGGGAAGAGTCTTTAAGTAACAGATTCTAATTTCCTGGGATTCTTACCACTAAAAATCCTTCCTAACATCAATCCCTCCTACTGCGGTCACATGAACTGATTCTCCCTGGCCCTGGCTCAGTGGAAACAGCTGTCCACAGCAAGCAGAAACATTTGTTTAGTGCGGGATTAAGCATTAACAATAGGATGGAAAATTGGAGGAGAGGAAAGGTTTCCATTTAGTTTCTTTTTTTTTTTTTCCTTATGAAAAGTTACTGCCCTTCTGGGTTCTTTTGCTGTTGGCTCAACTTCTGGACTCCTTGCTTCTTGGAGCCAGCTGGAGCTTCTCCAGAGACCTGTGCCTGTAGACTTAAGCCATGTTTCAGAAATATGCTTCCCAGATTCTGCGTAAGCACGAAGGACTTGATTTGGATGCTATCCTTGTAGCGGCCACGCTCCATAATAGCAAAGAACCAGCTGCCGTCTTTGGGAAACCTGTCCAGGAAAAGCAGTCATCCAGAATTTCCGGGACAAATTCTCCTTTGAGATGGGTGAAGCTGGGAGCTGCCTATGTTATGAATCACCAGGTCATCTGCAGCCTGCCCGAAGCAGAGGGCTGAAGGCCGAGGGAAGAACAGATAGAAAAGGATGAGTTCTCCCTGAAAAGGGTCCCCACTGCCTCTGCCAACTTGGCTCCATCTCCCCCTCAAGCTCTCAGATGCTCCAACCCAGTAGGGACTTGTAGGCACCCAGTGCTTGGGATCAGGGTTCTCAGGCTGGCATTGAGGGGGTTAAGGCAGTGACCAGATAGCAGCCTTTTGGCAGCAAAGCCCTCCTCAGCAGAAGGAAGGATATAGCTGTATGAACTGCCTGCTTAACAATGCCTCGCATGTCCCCAGGGGCCCGCCTGCAAATAGATTTCATCTTGCTTTCTCTTGTACTTTTCAAAGCTTCCTGTTTTCTCACGGTCCTTTTGGACAGTTTACAGTCTCTCTCTCCCTCCCTCCCTCTCTCTCCCTTTGAGGAAAGGAACACCCTTCTTATTAAAAGAGAGAGAGAGAGAAGGATGTAAGGGAAGGGCAGCTTAACGGAGGCCATTCTCCGGGGCTGCAAGCTGCTGCTCTTTGACCTTTCCTCTCAGAGCAGGGAAACAGGCTTCCTGGAGCATCGCAGTCTCAGTTGTGTGCCTCTGCGTGTCTGGTGGGCCTCTGGCGGCCGGCCCAGTGGCTGCCCACTGCCATGGCCCTGCCTCTGTGCACAGCGGCTTCCCTGTGACTCCGCTGTCAGCACTGTCACTGGGACTCGCGGGAAGTTGCCTGGACCGAGGAGGGACTGGGCGCCAGGAGGCGGAGTTAGGAGCTTCTATGCCGAGAAGGGGACAGGGCACCTGCTCGCTGTTTAAAGGGCTGATGGAGGGTCAGGGAGCCAGGTGATAGGCTCCCCAGAGCCTGCAATCTAGGGTGAACCTTCTCTCCCCATTCACATTTCCCAGGGCTGCGTGAGCCACACCTGCTTCCATTTCTATGATGCCTCAGGTAACCTGGCAGCTGTTTACTCAAAGGATTCTTCACTTGTTCCTTCCTTAGTGGGCCTTCCACGTAATTTGGTTTTAAAAGACAGCACCCTTATCCTCAAAGAACTTAACCATTTCTGGAAGGCGAAATGTACGTGATAGTGGCAGTAATGAGCTAATATTTATCGAGCGCTTACAATTTGCTAAGCCCTTTACCTGGACCAAGAGCTCGCATGGGATACTGTGATTACCATGGACATTTTACAGAAGAGAAAATGGAGCAAATTCTGTATCGCTCTGGGGTTTCACTATTGTCTCTCTGCTCTGCTGTCTATTACACTTTGAGATCCACTTCCCTTTTTTAAAGTAGGTTTAAAGGTGGGTATAGGTGGAAAAGCTGATATTTAATGTCACAGGCACACTAATACTGCTCATTAGAGCAACTGAGAGTTAAGGAGGGCTGGACTGGTTGAGACGACCACCTGCAAGATGAAATCTGACTCCTCATCACTCCAGCAGCTTCCTGTATCAACACCTATCCTGGTTTTAATTTCCGCAGACCTCGGTAGGAGGCGATTCAGCAAGTCTTGACTTGGGCAGGCTCTGCACCTCACGTCTTGTGACTTAAGGGGGCTGTGTATATGACTGCTTTCCAGGAGAAGCTAGAGTTGGGATGCTCCCCCACAACCCTTCTCCCTGTCCACCTAGCTCCTCTCCTCCACTACAGTGATTCTGCTTAGAGCTCACACCAAACCCCACCTGAAGGCACCATCTTTAATTGACGCAATCCTCTTTTTCTGGCCTCTCTTCACCAATTGGTACTGAAAGGCCTCTCCAACTTTCACAGACACAGAAAATCTCCATATATTTGTGTGTTGTCATGTGAGGATGATCCTCTAAGAAGGATGACAAGGCCAGGTGTTCTGGATAAGAACCCAAGGGCTCCGTGGAAGGGCCAGAGGCTGAGAGGAAGAAGCTAAGGGTACCTACCACTGAGATGTGAATGGTATTCAGGTACTTCAAGTCCTGAGTTAATTGCTTCTATCTTTCTGCCACTGAGGATTTTGGTTTGCAAACTAGTGTGAATAGCTTTAGTGGTAACAAGAGAGAGAGTTAGTGATGGCTGCTTTGTGGAACTTTTGCATGAGGAAGTCATATTTTCCCTGACTTGGTTGTTTATTTCCTAACCATACACTTAGACATTCATTAAATGTTATTATATATGTAGCCTTGTGCTGAATTACTGGGGTTGGCCACACAGAGAAGGAAGGTGGCTACATTTCTGAATACCAGAAATGGTATTTTATTTGAGGACAAATAAAATATTATTTGTCCTCAAAATATTATTTATTTTATTTGAGGACACTTTTAGTGTCCTCAAAATTTTCAGAGCTAACACATTATTTCTTATCCCTGGGAAAGCTCTCCATTGGCTACCAGTAAGCTATCATAAACCATAAAAAAATGGTATATAAAACCATGGTATATTAAAAATATAAAAATTTTATAAACCATGGTGTATAAAAATTAAGTTTTATCAACAACAACAAAATTTGTCTCCTTTACCAATCACACGTAAAATATATAGCTGATGAGTCATGTTCCACAGTGGATCTTCTTCCCTGAGGCTATAAACCTTGACTTCAGGAGACAATCAGTTCAGTTCAGTCGCTCAGTCATGTCTTTGCAACCCTATGAACCGCAGCATGCCTGGCCTCTCTGTCCATCACCAACTTCTGGAGTTTACCCAAACTCATGTCCACTGAGTCGGTGATGCCATCCAACCGTCTTATCCTCTGTTGTCCCCTTCTCCTCCTGCCTTCAGTCTTTCCCAGCATCAGGGTCTTTTCAAATGAATCAGCTGTTCACAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAGTGAACACCCAGGACTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAATCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGGACTCAGCTTTCTTCATAGTGCAACTCTCACATCCATACATGACTGCTGGAAAAACCATAGCCTTGACTAGATGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTTAATATTCTGTCTATGTTGGTCATAACTTTGTTTCCAAGGAGTAAGTGTCTTTTAATTTCATGGCTGCAATCACCATCTGCAGTGATTTTGGAGCCCCCACAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTGTTTCCCATGAAGTGATGGGACCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGTGGTATTATCTGCATATCTGAGGTTATTGATGTTTCTCCCAGCAATCTTGATTCCAGCTTGTGCTTCCTCCAGCCCAGCGTTTCTCATGATGTACTCTGCATATAAGTTAAATAGGCAGGGTGACAATATGCAGCCTGGATGGACTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATACAGGTTTCTCAAGAGGCAGGTCAGGTGGTCTGGTGTTCCCATCTCCTTCAGAATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGGCATGGTCAATAAAGCAGAAATAGATGTTTTTCTGGAACTCTCTTGCTTTTTCAATGATTGGAGACAATATCATTTATTAAAATGATAAAACATCCTTTTGTCCCCATGTACCACTAAAATGACCCAGAAAGTTCAGAACTGAATGAATTGATCTAGAAAAGCATGAGTATAGAAAATACGCCCTCAGCTATGATGATCATAAAAGGTTGCTTGTCCAAAACTGAGGAAGAATCTGGCAGTAGCCCTCATGCTGTGTGCACGCCTGTGTGTGTTGGGTGGAGGTGGGCTATCATATGAGGGGCAGAGGGGCTGTGGCCACAGGCAGGTGAATTGCTCTAACCCCAGAGTCACAGCAGTTGCAGTAGCAATAAGCTGTGGGTCATTATCACAATAGTAATAGTTCCCTTGTCTGTAGTGTTAAGGATGATGAAATGTCTGAAAATAATAAAGAGACTATTCTTGTGCCACAACAAAAACAAAAGGCACTCCACATATTCTTCAAGATTAGGTTCAAATTTTGTCTCCTTTATAAAACCTTTTCAGACCAATCCAGCTTCTAATACCTCAGCAACCAGAGATGATAACTAAAGTGGAATATCAGCCTCCATGAAGCCATTGAAGGAAGAAGGCACCCATTTATTCCTTCAGTTCTCTCTCTCTGTCCTGCCTGTAATACCACCAGACCCATCCAGGCTTGGACAAGTGCAGTAGCTTAATTGATCTTCCAGACCCTAGCCCCTCTCTCCCTGCATCTCTTGTGCTTATCTCCCCATGGCTCTTGCTCTTTTCAGACCTGCTTAATGTGCCTCACCCCTTCACTCACTCAGCAGAGGCTTAATAAGGACCTATCATGTGTCAGCCTGATGCTAGGCAGGGATTATAACAAAAAGGCAGGCAGAGCCTTTAGAGATGCCTCTGTCTAATGAAGGGCTGTTCAGCTCAGCAACTTCAACAGCAGCATTGTTCCAAATAGTCAGGAACTATCCCGTGAACCAAATGAGAGACATCTTTTCTAAGATGACCCATGACTGGAAATACCTAATCTAGAATCTCTAGATACATTTTTCTTCTTAGCCAGGGCAGAGAACTGAAACTAAGCTTATAAAGAAAACTCCATCAGAACTTTCACATGTGAGCAAAATTGAGCCACAGGCTGATAGATCTTTATGAACTGTCTCTGTTGAGGATAAAAAGAAAGCAAGTGTCCATAATTTTTCTTAAGTTAGACCCACTCTCTCAGCATCTCCCCTCTTGGGCCACCTTTTCCAGATGAATGTGGTGAGGATGCTCTGAACACTGGGTGTGGGGCACCAGCATGCTGCATTCATTCTTGCTAGTAAGGAAGTGGAAGGGGGAAAAGCGCTTAAAACCCCCAAATGTGAATCATTTAAAAATATAGAACCAGCCATTCATTGCCCATGCATAGATTATCTGTGAAAAATCTGCAGTCCCAGGATGGCTTCCTCTTACTGCCCAGTGTTCTGTTAGTCTAAGTGCCTGAGGTCACAGATGTTGGCCAGCTCAGCTCTCACTGCCATGGCCACCTGAAGACAATATGGTCTGCATTAATAAAAGTTCCACCCAGAGCTCCTCACTGGCGCCGACACCATGTCTCAGTGAGAAAGGAAAACTGGCGTCTGCTTCAGTGGACACCGCATTCCACGCCCTCTCTGCAGGCCCCGCTCACTCTGTTACTCTACCCTCTGGTGTGGGCCTCGGAGGCTGGGAAGGGAGGAGGGAGAGAGCGTTCCTCCCGTGAACCTGGAGTCCCAGCACAGACAGAGTCCTTCTCGGCATTCCTCACAGCACAGCCGAGCAAGGGCTGGAGCTTCCAAACCCCACTCTGGGGAAGCCTGGGGACAAGAAAAGCAAGGAGAGCACGCACAACAGCTGCTCCTGTCTCCCACCCTCAGCATCTGCACGTCCTGCCTTCAAACAGGCAGTTCTGCTGTTCCCATGGGACCTAGGGAACCGCTGGTGTGGTCCATCATGTATTTGCAATTTGATGGAAATAGGAATGAGAAGAAAAGAAGTGACTAAAACAGGTTGGCTTTTGGATACCTAGGATGATATTTTCAGTACTTCAAATGTCTACCCAGAGAACAGACACAGTCCTCCCTTTATACACTGTTCCTTTTAACTCCCCATAGTCAGCAAATTAAAAAAATTAGAGGAGCATTGTTGATACAGTCTAATGGAAGAGTTATGTTGGGGGAAACTGTGTGATACATGCTGACTGATGATATGGTCTCTGGTGTCCAAGGACCTGAGTTCATCATCCCAGTTCTAGCACCCATAAGCTGTGTGTGCCCTGGCCAGCCTTTCATCTTAACCCCTCAGTTTGTCCATCTGTAAAATGGGGATGAGAACGGCACCTATCTCATAGGACTCATGTGAGTTAAGTGAAATAGTCCGTGGCAGACTTGGGATAGGGCTTTCCATATTGTAAATACTCCATAAATACTAACCAAGTCATCATATCCTTATCATTATAGTGAAGGATACTTTCAGCAATTGCTTTTCAGAGAAGATTTTCTCCTTTTCGAAAGGTTGTGTTCAAAAGAAGCTTCAATAGCTTTGCAGTTTTTACCTTGAGTTTAAAAATTCCTGTACAACAGGAATAAAATCTCATGAATCCATCCCTCCCTGCTCCACGTCTGAGCCTGGGCTCAAGGCAGCCACTCCCTGACTTCCTTGGGGACACTTTATTTGGAAGCAGTTTAAAAATGCCAAGATTCAAACAAAGTAACAGCTCGTCCATCCTCACTCAGGCCTGAGTGTGGTTGTCTGGGCAAGGGTCCCACCCGCGAGTAAACTGTTCTCCTGGTCACTGTCTCGACAG
Seq C2 exon
CTTTGTGGGAAGGAATTCAACCGGATGCACAACCTCATGGGCCACATGCACCTGCACTCCGACAGCAAGCCCTTCAAGTGCCTCTACTGCCCCAGCAAGTTCACCCTGAAGGGGAACCTGACTCGCCACATGAAAGTGAAGCACGGGGTCATGGAGCGCGGCCTCCACTCTCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000020601:ENSBTAT00000027448:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.169
Domain overlap (PFAM):
C1:
PF134651=zf-H2C2_2=WD(100=40.6),PF134651=zf-H2C2_2=PU(65.4=26.6)
A:
NA
C2:
PF134651=zf-H2C2_2=PD(26.9=11.9),PF0009621=zf-C2H2=WD(100=40.7)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]