GgaEX1031817 @ galGal4
Exon Skipping
Gene
ENSGALG00000026986 | KIAA1324
Description
KIAA1324 [Source:HGNC Symbol;Acc:HGNC:29618]
Coordinates
chr26:1134723-1135601:+
Coord C1 exon
chr26:1134723-1134824
Coord A exon
chr26:1135225-1135351
Coord C2 exon
chr26:1135423-1135601
Length
127 bp
Sequences
Splice sites
3' ss Seq
TACCCGTGTGTCCCCCACAGCAA
3' ss Score
9.18
5' ss Seq
CAGGTAGGG
5' ss Score
9.46
Exon sequences
Seq C1 exon
GTCCGGCGAGGTGACGCAGTCCTGCGCCGGGGGCCGGGCCACCACCATCCGCCTGCGCTGCGACCCGCTGCGGCCGGGCACCGGCAGCCTGGCTGTGCCCAG
Seq A exon
CAAATGCCCCGAGGGCACCTGTGATGGCTGCACCTTCCACCTCCTGTGGGCAACGGCCGAGGGCTGCCCGCGCTGCTCCGCCAACCACTTCCGCGCCATCGTGGGCGCTTGCCAGGGCGGCGTGCAG
Seq C2 exon
AGGACCACGTATGTGTGGAAGGAGCCGCGGCTGTGCCACGGGGGGCAACGCCTGCCCGCCCCCCGGGTCCGCCCGTGCCGCAGCGCTGAGTTCTGGCTGAAGGTGGGCGTCTCGGTGGGGACGTGTGTGGCCGTGCTGCTGGCTGCCCTGGCTGCCTACTTCTGGAAGAAGAACCAAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000026986-'22-30,'22-29,23-30
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]