GgaINT0046062 @ galGal3
Intron Retention
Gene
ENSGALG00000009287 | ATF2_CHICK
Description
NA
Coordinates
chr7:17821792-17842122:+
Coord C1 exon
chr7:17821792-17821998
Coord A exon
chr7:17821999-17842016
Coord C2 exon
chr7:17842017-17842122
Length
20018 bp
Sequences
Splice sites
5' ss Seq
CAGGTATAC
5' ss Score
7.48
3' ss Seq
ATAACTTTCTTCTCCTTTAGAAT
3' ss Score
10.52
Exon sequences
Seq C1 exon
GCATCACCAGCTCAGCCTACACAACAAACACCAAATACAGGTGGTCGGCGAAGAAGAGCTGCTAATGAAGACCCTGATGAAAAACGAAGGAAGTTTCTTGAGCGAAACCGAGCTGCTGCTTCCAGATGCCGACAGAAACGGAAGGTCTGGGTACAGTCATTGGAGAAGAAGGCTGAGGACCTGAGCTCGCTAAATGGCCAGTTACAG
Seq A exon
GTATACTTCTTATTCCAAGTAAAAATGATTAAATGACTCTTGAACAGTGATTCTGCATCAATGGAACTTAAACTTGGCATAACATCTGAAATGTAAAATACTTCTAAATGATATCTCAGGTCAGAATTGAAAATCCCGTATTGAATTGCGTATTCCAGCAAAGTAAGAATATAAAAGAGTGTTCCGATTTTAAGATGGGTAAACTTAGGATGATTCCCATTTGTCCCTTGTTCCATTTTAAATAACTTCCAGACAGTGATACTAAGTGACTTGATATGTTGGAGTAAAGGCTTAATAGCCTTACCTTAAAAAATGCTTTGGACTTATAGATTTCTATCACAGTCTGAGTTATTTAAATAACGTTTGCTTTTATTTCCTTTGGTTCTTTTTAACTTCACTGTTTTTTCCTTTAAAGTGAATGTAGTGCTCGTGAAAGGTGCCAGATTGACATCACTGGAAACTGAAGGCCTCTTTTGTACACAGAACAGGTACAGCACAGGCAGTGTCAGTGCAAATTTCACCACACTGCTCTCCCAGTGTGCATAACTCTTAGAGGGTGAGATGTATACTGTAAGAGGGTAGTCTAGTGTATATATATTATCAGTTATTTCTCCATACAATCAGAGGTTACCAGTCATTGGAAAATTGTCACGTTGATGCATTTTTTCCCCCTTAAACAATCCATGACCCTTTCATTTAAATTGCTACTACTGCTAAAATATACTTTCTTCATCTTCTACCACAGCACACAAGAATTGGCAGGAAGTATTGTTTCAAAATATAAAGTCTGAAAGTGTCATTTTAAGAATTATGGAAAGGAAAGCTTGATGTTGTTTTCTAAATGAAGCATTTGTTTAGAAAATGTAATAAAAAGTACTGTGATATTTTGAAGTTTACCTTGTTTCCTTAGAGTTGTTCAGTGAGTCAAATTCACAGATCTTTCCTGTTAAAACTCTCGTTTGGTGCTACCAATGAACATGTCCCAGCTCAACCAACAGAATACTAGAGCATGTTCTATCTTGTAATCAACATTTTAAAAGTATTGGCCACCTCCAGTTTCCTGACTAGAATAGAACAGTGCATTTAGAAGGGATCCACAAAGGTCATTGAGTCCAATTGAGACCAAAGCACATTATTGATGGTATTATCCAAATGCTTCTTGAACATTGACAGGCATGGAGCACTCACTACAAAGCCTGTTCCAGTGTTTGTCCAACCTTAAAGAAATTTTTCCTAAAAATAAAAAAATATATCTACTCTGTCTTTAAAAATTCTCAGCATCTTCGACTGTGAAATATAAGAAATTCAGAGCTAAGCACATAATGTGAAATTATTATTCATTCTAGAATCACTACCTGACATCATAGCATTGCTTAAATTACTTGCAAATGCATAATCTTCTCATACCTGTTCACAACCTGAGGACTTGACTTTCATGTAGTCATAGCCCTCACTGTAAATCCATTAATTGCAAAATGACATGTAGCACTATAGGTTAAAGAATCCAAGAAACAAGTGAAGGTATAGTATATTTTTCTTATAGGAAGAAAAACAAAGAACAAAAACAATTGGCTGTATTTTAGTTTTCTTAATGAAATGGTTTTTGGTAAGATATGAACTACCTTTAACTTGTACATGTCCATTTTTATAGTTGAAAGCTATGAAAGTACCATGTTTTCATTGGTAATAAATTGTCACGATTCGAAACCAATAATGAAAGTTGTCATACATCTACATATATATGCACACACCTTATTTACTGTAGCTGCTGCTATAAGAGTGACATTAGTACAGAATAACCTGGTAGTCTTCTGTTTATTAGAGCAATCCTGGTTTTGTTCTGTGCACGTTCAAACATCCATATAACAGATAAAGTGTAGAATCAGACTTGTTTGCAGATATTTTAATAAAAATAACATATCCATATAAAGGCATGCAAATATACTACCTGATGATGATGAAGTGCCCCATAGCAGCAGTAATGGTACAGGAAAAAAAAATTAAAAAGCTTTGTCTCATTGAGAAGACCACAGGTTTTCTCTTCTTTAAGAGCTGCAGTTTTTCTTAATGGCTGTTTGTAGCACGATGTGGTTCTTGGTAGAAATAAAATTAAGAATAAGAATAGAATCTTTAGTCAGAAATGAAATCAAGTTTTACACTTTGTTTTATGGCAAATGCTAAAGCATATTTCATCCTAGGATTTTGTCAGTGATCTTAATGTCTCCTAAACTATTAGTGTAACTGTGGCTGCTCATGTAAAATATTGTTGTATTTATTTGTGTGCATTGCTTAGATCTATAGTCGCATCTGAATCTTGATTGTGGTTTTTAACTATTTGTTTACATATCTGGAATCCAGAACATTTCCAGATTTCCAAGCAGTAATTCTGTAATAATTCAAGAAAAAGCAATTCCTTAGTTTGCCAAAAGTGAAACTGTTAACTGTGAAGAACAGACTGATTTGAAGAGTGTTGAATGTCAGAGAAATAAACTGTTATGTGAAAGCATTCGGCCATCCTGAAGTAATATTTTATTTAATAATCTAACACAGCTCATCAGCATAGTGAGCAGAAATGACCCATGGTTACTTACGTTATATTTGATAGTGAACCTGTTACATTTGGAGTTCTGCCTTAGTACAGCTTTATGGACTGAGTGGTAGGGTTTAGTAGTGCTTGTTTAATATCTAAGTGACCTGCTGAGATGTCATAATTACAAAATTAGGTTAATACCAAAATGACTAGAAATTGCATTGCAGTGCTTCACATAACACTTTCAACTTCTTTCAACACAGTAGTTTTGATGTTATCTTTGTGTGAGAGATTCTTAAGTAAATGTCGTTTTTAAAACTGGGAGCTCTCTAACACCACATACAGATTTGAAGAGCTACAGTTGATTGATACATATTCTTTTGTTCCAGTTTTCAGCTTTCTGGAGATGAATTTGTGTATGAGAATGTAATTTATTCAAGCTTTTTTTACTGAAATGAAGATTTCAGTGAAATCATGTCAATAACATTTATTAGATTGGCCTTTATCAATCTATACTATGGGCTACGTATGTTATTTCCTGCTTCCAATCTTTTGAAATATATTTATTGTTTTCTTTTTGTGCTTTCTACTCATATGTTGACTCATTTAATGATCTGAGACGTTATACCTTGTTGTTTTGCCTCTGTGCCTGGCCTGAATATGGTATGCTATGTAACACGTTCTTAAGGAGCTACTGACGATGTGTGCCCAGTGGCTGCTGAGAGGTATCTCAGTGATACCAAAGTCCATAGCATGTGTCCTATTTGGTCCCTATCACTTGAAAAACTTCAGAGGACGAAGAATTAGTGAGTTTGTGTTACCTCTGTGTAGTAGAAGAATAGTCTGTCTTCCTTAGGAGGTCTTTTTGAGCTTTAGGAGATGTCCATTATCAGCAGTTGGTGGTTTGTACTAGTGCTACAGAAGCTGCTTTAGGAAGGCTATGTAAAAAATAAATGCACAATCCTTTATCTCCAAAAGTGCCACGTCTGCTTGTCTCGGGCAATTGGCCTGGTAAATATACCTCACAAATGCTGCCCAGCACGCTGCTTAGTAAGGGTTAATCTGGTCCCATTGTTACACATGCGTTTTGAATATAGGGAAAACAGGCAGATGCAGAAGAACATATTGTACACAGTGCAATATACCGTGACGTACAGAAGGGAAAATATCTTTTGAGAAATGGAGTACAGGTGGAAATAGATGTGCTTTCCCCCCCAATCCTGCTTTCCCATGTTAGCATGCTTTTGAAATGTGTAAACATAAAAATTCTTCAAGGTAGTATATGAGGTATATTTCATGCTTGTTTAAAGAAACACTCATACCTGCTCTTGACTTGATAAATGAAGGGGGCTGTTCATCTTCAGTGTGCAAGAAGTCTCAGTCTTTCTTCGTGCCAACTGTTGAATTGTTTGTTCTGTGTGTTTCTTCTTGTTAGCCTATTTTCCATAAAGACCACCTGTTAACATGACCTGAGGTTAACATATTTTGAAAGAGCTGGAAGGTTGTCATATTGTCAGATGCATGATAAGAAAACTGCAAGGTATATGGAAGTTGATTCTAACAACCTGCTTTTATTATCAGTCCAAAGTGGCTCTTACTAGTAGCATGTAAATGGCAGCTATTGATTTGTCTTTCCTTCATATTCCACATACCAAGTGTGTCTGGGACTTATTCTCTTCTACTTTTGGGAATGGTTTGTAAATGGAATATGATGCTATTGGCTCAGTGTTGATGTTACTAACAGTGCCAGCTATGTTTTCAGGGAGTATGCCTCAAGTTATTAATTTAGTATAGGAACTCTTTTTTTTTTTAATCTGCTTTAAAATAAAGTCTTTGCTTTTTTTCATTTCTTTTAGCAAGGCACTGCCTTTTCAACTCTTTTTCATGAATACTAGATTTATTTACGCTGGTAAACAGCTGCTTCATTTTTATATACGCTGTTTATGTATAAAATGCTTACTTAAATGGGGGAGATGAAAGTAGAAACTTTCTGAATACTTTTTCCTGGTTTGATCATTTATTTTGCCAATGTTCCTTTAAACTAACAGAAGTATGATTCATGTTCTTGGACATTGCTGCTGCTTTACATTATCAAGAAATGTCTCAAAACTGCATCAGCACTTTTCTGTATCAATTCTGTGCAGCTGCCTGCTTGGCATCCAGACACATGGATCCTCAGTAAATAACATGGCGAACTAAGAGAACTGAAAGCTGGAGGCACAAATAGAGTGCTCTCTTAACAGCCCAGGATTTCAGGACATACAATTCCAGATGGTAGAGCTTTAGTAGGTGTTGTGTTTTTTCTTTTTTCATTGTAAGCTTTTTCTTTGAAATCACAGTTCTTTTTTTTTTATTAGAAACATCAGTGAAGTCAAATTTCTCTCTTTCAGCTCTTCTTTTTGTTTTAAAAATTCTGCAAAGGATATTTGGCACAGTAAAATGACTGAAGGGAAAATTAGTCCTTACTAATTTTTAAAGAAGATTTGTAGATTNNNNNNNNNNTTTTCCTTTTCATTTGTGTTCCGGGCTAAGCCACAGAACTCTAAAATACCTATTTTTACAACTACTTGTTTTCTTTTTACTTTTTTGGTAGTTCTACTGGAAGGTGAAATATAAGCTTTTCTATTGAGTTAAATTTTATAACTGATCAAATGATCTATGTTTCATCTACTAACAGTAGACTGCAATTTATGGACTTACTGGTGTGCTTAAATAAGCAGAAGACAGGGAACAGTTCCTGCATCTTTTTTGTACTGTATCCACTTCTCTGGGATGAAGCCTGTCAGCCTGATATTCTTACTGTATTTTAAATGCAATACTGAATGAAGGGGGACAGCTGTGATGTTGCTCTCTCAGCAATCAGGACATAGGAGTCAGGTTTTTTATAGATCTTTGCAATTCTCTTATCTGTTGGTTTTTTTTCTTTTTAAATTATTTATTAGTTGGAGGTTTTTTTGTTCTTTACAGACAAATATTGCAGTCTCTCAGATATTTTTTCATACTGCATTACAAAATGTAGGTACACAATATGTAGCACATATTTTAAAAAACTAAATGCTCGGATGTCTAACTAATATTGCATCTGCTCTGCAGATATTAAGGTAAGTTTTACAATGTGTGAGTTGCAAAGCAGATAAGATAAAAGCCATGAGTTGTAGAACGGGAGTTCATGTGTTTAATGCAACTCCAGAGGGTTTTGTCGTGTACGCTTTTGGCCATAATTGTTTAAATCATTTATTTAAAAGACCTTGGTTTCCTAATGCAGTAGTCTGCTTTTTTCTACTGTCCATATGTATGACAATGCTATTGTGAGGTTTTCTTAAGGCAGATCTACCTGCTTCAGAGATTCTGGGTTAAATTCTTGCAGAAATGTTAGAAGCAGCTTTTTCACATGAAGATGCGATAGCCTTGTATCGCAGAACTATACCAAGTACAGAGCTGTCTCGCGTAGCAGACACAACTCTGTACGTTTTAGATTAAATACTTGGCACAAAGCAAGGTGGGAACCAGGCGCTTCCCTTCATTTTTACTTTGTGCCTTTCTTTACTGAGGTCATTTCTGCCATTCTTTTTTTTTTGCATGGCGTTTCAAGGAGCTGAGATATGTTAGAGTACGATCAGGAAGCATGTTGTGCTCTGATTTCATTCCTCATCTCAATTCTTCGTTTCTCTCTTAAATGTTTACAAAAGGCTACTGTTACGGATATCTGTATTTTTTCCTTAAAATGAAGGTGAGAACTTTGAGCTTTAAAAAATATATTTTTGTATTTGTGTTTTTGTTATTTTTAATGATTGTAGAGGTTTGGTATTTAAATATTAACCTAAAATTTATTATTTAACTTAATTTCTACTGATTGATGTAAAACATGCAAATTTTCTTATTATTTGATGAATATCTATTTTGATGAACTACTTATGAGCTGCATATATCAAATTGTATATACAACATCATACATTTATTTGTATAAAATCATGAGTGAACTACGGAAAAACAAGTTGAGTTTCTGATTTCTAAAAGCTAAAGACTAATATAACTTGAAGAAGTCTTGTTTCATAATGGGCGTAGGATGCCTTCCTGGAGCACAATTAAGGTTTTCCTTCAGCTGTCTTAGGAGATATAACCCTTAAGAGACCTAATACAGTTGCTGAGTAACTCCCCCTCTCCACCCCAGAAATGGACAGCTTTTCAAAGTCAGTTTCCAAGTGGGCTCTCTTTGTATTGCCGTGTCCCAGCTTAGTGCACGATAATCTGAACTATATTTGATAAAAGTTTTCAATCTGATACCAGAGTCCTTCAGAATGACAGTTCTGATTTTTCGTGTGAAGAGAGTTACTGAGTCATCACTTTGAGAGCACTGTTCTCTCTGTTAAAGTTGCTGGGCATTAAATAAGCATATGAATTCTATGGAGGGACAGCCACGTATGAAAACAGGTTCACTGAGTGAAATAGCAACAGTAGAAAATCAACCAACTACAAGTAATACAACTGCAAAGCAGATAAGATAAAAGCCATGAGACAAAAATGTTATATTGTCTATGTAATGATCCACATCCTTACAGTTGGTGACCTTGTTGCATACTGTTCTCAACTCAAACAGCTAAAATTTAGTGGACGAAGAATGTGTTAAGTACAGTCTTACTTGTCTGCTTGATCACTGAAACCTATACATTGTTACATATATAATGCTATATATGTTTCAGTGCTACGAGATAATTGTATGCAATTGGATTGCATTTTTATTTTACTGTAGCAAACACATGTTCCATTCACACCAGTAGCAAGCACTGTTACTGCAGTTCGGAATATGATTGGAACCCCTAACTCTTGTTGCTTGCAGAATTGATTGAGATATGACTAGAGACTTCATTCAAGCACACCTTTTGTCTTCCGCTGGTATTCTTTTGAATGCATCCTTGTAAATGTACTGGGAGTGACAGTAGGAATGAAAATGGGTTTCACATTTCTGCAGCACACTTGATATAAATTGTCCACTTTGGCATGATTTCATATTTGTTGTGCTGAGGAAACTAAATGCTACATAGTTTAGTAAAATAAAATGTACAGATTAGCCTTGTAATATTTTAGGGAGGATTAGAATTAGATGTAATAGCTGTTACAAAAACAAACGAGCTTCTCAGGTAAAGGGTGCTAAGGAGTTAACAAGATGGTGCTTAAAGGTTCCTTCCAACACAGACCATTCTATGATAAGAATTCGTAATTCTAAGTCCTGCATAGTTGCTTCTGATGTGTTTGTGAAAAGATTTGAAACTGTATGCTGCAAAGATTAAATCTGAGCCGGGAGCTGTTCCTAGTTGTAATGCATCCCTTTTTCCTGAGTGTGTGTGGATTGTGGCTGCAAACGTAATGCTCGTACCCTTCTGCACGGGTTGCAGAAGTTTCTCAGTGAACAAAAAGTTGTTCTAACTTTTACACTGAACGATCCCCCTGCCTCCTCCCCCTTCCCATGTAAAATCTTTTGTCACAAACTGAGAAATAGCTTGCACACAGTGGGCGGCCAGTGGGCTTTCTGCAGGAGGCTTCTACTGAGAATTGACAGGGCAGGTTGGCAAATGTTCAGAAGCCTGCATTAACTTGCTTGAGCCCGGCATGGGACCCTGTGTTCAGCAGAATTCTTCTGACCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGTTTGCCCAGCGAAGCTGTGAATACCCAATCTCTAGAGGTGGGCAAGGCCAGGTTGGATGGGACCCTCAGTATCCTGATGTAGTGGTTTGATTAAGAAGATCATCAAATCAACATTTTTATTTTTATAATTACATCATGGAGTTTGTTTTAGTAGCTCAATTAGAATCAATTAGAAAGTACTTGGGCCATTCTGTTCTTGTTTAACTGGGTGGAGGCACGGAGTGAGGTTTTTTTGGTAGCTTGTGTTTCCAAGGTGAATTAGGAACATACAAGTTGTCAGTTTACTATTGTAAAGAAGTTAAAAACTACCTAAGAACTACCTAAGGCCTTAGGATTTCCAGAGTACTGTATACATACTAAAAATTGTGGGCATGTTACCTTTAAAAATGGCGTCATCGTGCCCCAAAGCCTGCGTCATTATGAGTTACACGCGTCGTGTTCAGTCTGTTCCCTTTTCCAATCTATGCTAAATACCAACCAGCATTAAGGAAGTTTTGGCAGATCTGTAGACAAACTGGCATCTTATCTCAGTAATTTTACCACAAAAAATCATTCCAGCCCCAAACTTCCTGTCTCTGTGTTTCTGTAGGTTGGCTCTGTTTGTTGTTCAGACTCTTTAGTTAATAATTCAAAAGTCAGATTTTTTGTAATTCGAAGCTACCACAATGCATAGAGAATTTGTGTGCAACTGTTAGTTTTGCAGTGTAAAGCTTTTGAATGTTTTAACTCACATTTTGCTAGTGTATTCTTCGTGTATTCTTAAAAAGATGGAAGTGCTTGAAAAGTCCCACTTAATGATTCCAGTCCATGGATTATCAGCCAGAGGTAGGCTGTTAGAATCCAACCATTTATCTGATGGAATAATGTATAAAGGTATACGAAGAATGTCCATACAGAGCTGTAGGGGATCGCTTACTTTTTTGTTCTTGAGAAGTGCATTTGGAACTTGAGCGGTCCCTACGTAGGGTGATGTGTGCTGTCACATTCTTTATAGAGCAGTTCCTATTGAAGAGACTACTAAAGAAACTTACTCTGGTGGTAAAGAGAAGTCACGGACTGAAGCTTCTTTAATAGCAAGCCAGCAAAGGAATGTTAGGAGTTTCTCATCCTTCTCAGTTTTCTGTATAGTCTTCAAACAGGATGTCTACTGTTGGTGGTTAGAGGCTATGATCTACTATATAGAGGGTCAATTAGCCGTATCACAGAGATTTTTTGCAGTTTTGGCAGAGGTGGATCTGCCATCTGTTGCTTAAATGTAAAGTAGGAGTCAGAAAATCCTATCAAGGAAGAAGAGAGCTATCACTATATTCCAATGACTTAATCCTGAGAGGCGTTGTATACTGTATGATAGCTGATATGGAGCATCCGTCTGCATGAAAGGATGCAAAATCCTTTGCTTTTTTGGACTGACCAAATGCAGCCTAGCTCCAGCATTTTTGAGACTTTTTCTTAATAATTAGTACTTTATAAATACTTACTTCATATTCCAAACCACCTTGATACAAGAGTTAATTAAAAAGATAATAACTAAATGTTCTTAATATTATACACAAATGTGTTTGGCATAAGGAATGTGAGAAAATTGTTACTGTTATGAAATTGTATACATTTAAAATAAAGACTCAAAATGGAAATATATTAGCCAGCTTCAGACCTACGTATTGCAGCTGAGTACTATACCAGTATTCCTGGCTCTGCATATGTCACTGCAAGTGTAATACAACACCAGTTTCAACAACTATTTCTTCATGACTTTCAAGTCATCTCTTTATGGGAACTGTTCATCACCAGGGAGGTTTTTTGTTTATTTCTTCATGCAGCTTATGGTCCTTTCTGAGATGTTTTGATGATTACACGAAGTTATGATTGCAAGTAGATATACGTCTAGATTGCTGGTGAAAGCCTGTGAAAAACAAGCGAAAAAATCCAGTAGTGATAGAGGTGGAGTTCCTGTTTGCCAGGTGGAGTGGAACTAACTAATGTAAACCATTCATAAGTCCTCAACTTACCATGTGATTATGTAATTATGTTATAGTATTTCCATTATGTTGAGGGGAAAAAGAAGTTTTGTTTTCTTTCAGAGACTGAAAGCAGCCTTGACCCAGCAGCACCCTCAGGTAACAAATGGAGATACTGCCAAGGGACATCCGAGTGGGTTGGTTAGGACTCAGTCAGAAGAGCCGCGACCACAATCACTACAGCAACCTGCAACTTCAACAACTGAAACACCGGTAGGACAACCAAGTGGAAATCTATTTCTTGCCCCATTCCTTGTGACATAAAAACTTCTTTCTTTACTGTTGGTTCACAAAGCAGATGCTAACAAGTACTGTGGAATACTCTCAGAGCTATAAGTTTGAGGGAGAAATGGACTGCTCTGCTGCAATGCTGGCAACATCTTATTAGATATATATATATAGTTATGGAGCAGACTGCTTTTTCTAGATGATTACATGTAATTTTGCCAGATTGCTATGTCTGTCCTGTATGTGTTTTGCTGTCATATCGATATTTATGTAGTAATGAGATGTTTATAATGATGCTCTTTCTAAAATGCATTATTCAAGATGATAATTTCAAAATAGGTATTATCTGTCTGTTTAGATTAAAAACTAACTCCTGATTTCTGGAGTGTGCTAACAGGAATTTTTGTAGGAACTGAGAATTATACTGCTGGTTTATATATAATCAAAAAGAACAGCTTACTTTATTTTGCATTTATATTACATCTGTCTACTGTAATTCATATCATAAGCGCTCTTCTGAACTTTTTAGCTGCATCAAGGGTAACACTTGTGTTAATTGCTTTAAGGATCCTTTTTGGGCTTCCACAAGAAGCGTTTCAGTACTGTGTCTTTCTGAGCACTGAAAGGAGGTTAGTGAGGTTAGAAGAGGTAGTCTTCCTGTGGGGTGGCAGGTGAAAACAGGAAACTAAGGAACAAAAGTTCCAAGTCAGACTGGAAGTGCTGCTGGAAGAATTATTTCCGAAGGTGAATCCTGGACAACTGCCGTTCTGCTTCTAAAAAAGCTGTCGGAGAAGCAGTTTCTTAAGGAAATATTTATAGATGACAGTGGAAAGCAGTCACTGTCCCTAAAGAGAAGGCCAGTGAGACAAACGCAAGGTTTATCATAAGACTTTAGTGTGTTTTAGGGTTGTTTCCTAGTGTTCTTAAAAACTTAAGATTATTACACTGATAACTTCTTCAATACTTCTTGCTGTTTTCAGGCATCACCAGCTCAGCCTACACAACAAACACCAAATACAGGTGGTCGGCGAAGAAGAGCTGCTAATGAAGACCCTGATGAAAAACGAAGGAAGTTTCTTGAGCGAAACCGAGCTGCTGCTTCCAGATGCCGACAGAAACGGAAGGTCTGGGTACAGTCATTGGAGAAGAAGGCTGAAGACCTGAGCTCGCTAAATGGCCAGTTACAGGTATACTTCTTATTCCAAGTAAAAATGATTAAATGACTCTTGAACAGTGATTCTGCATCAATGGAACTTAAACTTGGCATAACATCTGAAATGTAAAATACTTCTAAATGATATCTCAGGTCAGAATTGAAAATCTCATATTGAATTGCGTATTCCAGCAAAGTAAGAATATAAAAGAGTGTTCCGATTTTAAGATGGGTAAACTTAGGATGATTCCCATTTGTCCCTTGTTCCATTTTAAATAACTTCCAGACAGTGATACTAAGTGACTTGATATGTTGGAGTAAAGGCTTAATAGCCTTACCTTAAAAAATGCTTTGGACTTATAGATTTCTATCACAGTCTGAGTTATTTAAATAACGTTTGCTTTTATTTCCTTTGGTTCTTCTTAACTTCACTGTTTTTTCCTTTAAAGTGAATGTAGTGCTCGTGAAAGGTGCCAGATTGACATCACTGGAAACTGAAGGCCTCTTTTGTACACAGAACAGGTACAGCACAGGCAGTGTCAGTGCAAATTTCACCACACTGCTCTCCCAGTGTGCATAACTCTTAGAGGGTGAGATGTATACTGTAAGAGGGTAGTCTAGTGTATATATATTACCAGTTATTTCTCCACACAATCAGAGGTTACCAGTCATTGGAAAATTGTCATGTTGATGCATTTTTTCCCCCTTAAACAATCCATGACCCTTTCATTTAAATTGCTACTACTGCTAAAATATACTTTCTTCATCTTCTACCACAGCACACAAGAATTGGCAGGAAGTATTGTTTCAAAATAAAAAGTCTGAAAGTGTCATTTTAAGAATTAAGGAAAGGAAAGCTTGATATTGTTTTCTAAATGAAGCATTTGTTTAGAAAATGTAATAAAAAGTACTGTGATATTTTGAAGTTTACCTTGTTTCCTTAGGGTTGTTCAGTGAGTCAAATTCACAGATCTTTCCTATTAAAACTCTCGTTTGGTGCTACCAATGAAGATGTCCCAGCTCAACCAACAGAATACTAGAGCATGTTCTATCTTGTAATCAACACTTTAAAAGTATTGGCCACCTCCAGTTTCCTGACTAGAATAGAACAGTGCATTTAGAAGGGATCCACAAAGGTCATTGAGTCCAATTGAGACCAAAGCACATTATTGATGGTATTATCCAAATGCTTCTTGAACATTGACAGGCATGGAGCACTCACTACGAAGCCTGTTCCAGTGTTTGTCCAACCTTAAAGAAATTTTTCCTAAAAATAAAAAAATATATCTACTCTGTCTTTAAAAATTCTCAGCATCTTCGACTGTGAAATATAAGAAATTCAGAGCTAAGCACATAATGTGAAATTATTATTCATTCTAGAATCACTACCTGACATCATAGCATTGCTTAAATTACTTGCAAATGCATAATCTTCTCATACCTGTTCACAACCTGAGGACTTGACTTTCATGTAGTCATAGCCCTCACTGTAAATCCATTAATTGCAAAATGACATGTAGCACTATAGGTTAAAGAATCTAAGAAACAAGTGAAGGTATAGTATATTTTTCTTATAGGAAGAAAAACAAAGAACAAAAACAATTGGCTGTATTTTAGTTTTCTTAATGAAAATGGTTTTCGGTAAGATATGAACTACCTTTAACTTGTACATGTCCATTTTTATAGTTGAAAGCTATGAAAGTACCATGTTTACATTGGTAATAAATTGTCACGGTTCGAAACCAATAATGAAAGTTGTCATACAGCTACGTATATATGCACACACACCTTATTTACTGTAGCTGCTGCTATAAGAGTGACATTAGTACAGAATAACATAGTAGTCTTCTGTTTATTAGAGCAATCCTAGTTTTGTTCTGTGCACGTTCAAACATCCATATAACAGATAAAGTGTAGAACCAGACTTGTTTGCAGATATTTTAATAAAAATAACACATCCATATAAAGGCATGCAAATATACTACCTGATGATGATGAAGTGCCCCATAGCAGCAGTAATGGTACAGGAAAAAAAAATTAAAAAGCTTTGTCTCATTGAGAAGGCCACAGGTTTTCTCTTCTTTAAGAGCTGCAGTTTTTCTTAATAGCTGTTTGTAGCACGATGTGGTTCTTGGTAGAAATAAAATTAAGAATGAGAATAGAATCTGAAGTCAGAAATGAAATCAAGTTTTACACTTTGTTTTATGGCAAATACTAAAGCATATTTCATCCTAGGATTTTGTCAGTGATCTTAATGTCTCTCTAAACTATTAGTGTAACTGTGGCTGCCCATGTAAAATATTGTTGTATTTATTTGTGTGCCTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGTATTTATTTGTGTGCCCATAAAGGACCTATAGTCACATCTAAATCTTGATTGTGGTTTCCTAACTATTTGTTTACATATCTGGAATCCAGAACATTTCCAGATTTCCAAGCAGTAATTCTGTAATAATTCAAGAAAAAGCAATTCCTTACTTTGCCAAAAGTGAAACTGTTAACTGTGAAGAACAGACTGATTTGAAGAGTGTTGAATGTCAGAGAAATAAACTGTTATGTGAAAGCATTCGGCCATCCTGAAGTAATATTTTATTTAATAATCTAACACAGCTCATCAGCATAGTGAGCAGAAATGACCCATGGTTACTTACGTTATATTTGATAGTGAACCTGTTACATTTGGAGCCTTAGTACAGCTTTATGGACTGAGTGGTAGGGTTTAGTAGTGCTTGTTTAATATCTAAGTGACCTGCTGAGATGTCATAATTACAAAATTAGGTTAATACCAAAATGACTAGAAATTGCGTTGCAGTGCTTCGCATAACACTTTCAACTTCTTTCAACACAGTAGTTTTGATGTTATCTTTGTGTGAGAGATTCTTAAGTAAATGTCGTTTTTAAAACTGGGAGCTCTCTAACACCACATACAGATTTGAAGAGCTATAGTTGATTGATACATATTCTTTTGTTCCATTTTTCAGCTTTCTGGAGATGCATTTGTGTATGAGAATGTAATTTATTCAAGCTTTTTTTACTGAAACGAAGATTTCAGTGAAATCATGTCGATAACATTTATTAGATTGGCCTTTATCAATCTATTCTATGGACTATGTATGTTATTTCCTGCTTCCAACCTTTTGAAATATATTTATTGTTTTCTTTTTGTGCTTTCTACTCATATGTTGACTCATTTAATGATCTGAGACATGTTATACCTTGTTGTTTTGCCTCTGTGCCTGGCCTGAATATGGTATGCTATGTAACACGTTCTTAAGGAGCTACTGACGATGTGTGCCCAGTGGCTGCTGAGAGGTATCTCAGTGATACCAAAGTCCATAGCATGCGTCCTATTTGGTCCCTATCACTTGAAAAACTTCAGAGGACGAAGAATTAGTGAGTTTGTGTTACCTCTGTGTAGTAGAAGAATAGTCTGTCTTCCTTAGGAGGTCTTTTTGAGCTTTAGGAGATGTCCATTATCAGCAGTTGGTGGTTTGTACTAGTGCTACAGAAGCTGCTTTAGGAAGGCTATGTAAAAAATAAATGCACAATCCATTATCCCCAAAAGTGCCACGTCTGCCTGTCTCGGGCAGTAGGCCTGGTAAATATACCTCACAAATGCTGCCCAGCACCCTGCTTAGTAAGGGTTAATCTGGTCCCATTGTTACACATGCGTTTTGAATGCAGGGAAAATAGGCAGATGCAGAAGAACATATTGTACACAGTGCGATATACCGTGATGTACAGAAGGGAAAATATCTTTTGAGAAATGGAGTACAGGTGGAAATAGATGTGCTTTCCCCCCCAATCCTGCTTTCCCATGTTAGTATGCTTTTGAAATGTGTAAACATAAAAATTCTTCAAGGTAGTATATGAGGTATATTTCATGCTTGTTTAAAGAAACACTCATACCTGCTCTTGACTTGATAAATGAAGGGGGCTGTTCATCTTCAGTGTGCAAGAAGTCTCAGTCTTTCTTCGTGCCAACTGTTGAATTGTTTGTTCTGTGTGTTTCTTCTTGTTAGCCTATTTTCCATAAAGACCACCTGTTAACATGACCTGAGGTTAACATATTTTGAAAGAGCTGGAAGGATGTCATATTGTCAGATGCATGATAAGAAAACTGCAAGGTATATAGGAGTTGATTCTAACAACCTGCTTTTGTTATCAGTCCAAAGTGGCTCTTACTAGTAGCATGTAAATGGCAGCTATTGATTTGTCTTTCCTTCATATTCCACATACCAAATGTGTCTGGGACTTATTCTCTTCTACTTTTGGGAATGGTTTGTAAATGGAATATGATGCTATTGGCTCAGTGTTGATGTTACTAACAGTGCTAGCTATGTTTTCAGGGAGCATGCCTCAAGTTATTAATTTAGTATAGGAACTCTTTTTTTTTTTTTAATCTGCTTTAAAATAAGGTCTTTGCTTTTTTTCATTTCTTTTAGCAAGGCACTGCCTTTTCAACTCTTTTTCATGAATACTAGATTTATTTACGCTGGTAAACAGCTGCTTCATTTTTATATATGCTGTTTATGTATAAAATGCTTCCTTAAATGGGGGAGATGAAAGTAGAAACTTTGTGAATACTTTTTCCTGGTTTGATCATTTATTTTGCCAATGTTCCTTTAAACTAACAGAAGTATGATTCATGTTCTTGGACATTGCTGCTGCTTTACATTATCAAGAAATGTCTCAAAACTGCATCAGCACTTTTCTGTATCAATTCTGTGCAGCTGCCTGCTTGGCATCCAGACACATGGATCCTCAGTAAATAACATGGTGAACTAAGAGAACTGAAAGCTGGAGGCACAAATAGAGTGCTCTCTTAACAGCCCAGGATTTCAGGACATACAATTCCAGATGGTAGAGCTTTAGTAGGTGTTGTGTTTTTTTCTTTTTTCATTGTAAGCTTTTTCTTTGAAATCACAGTTCTTTTTTTTTATTAGAAACATCAGTGAAGTCAAATTTCTCTCTTTCAGCTCTTCTTTTTGTTTTAAAAATTCTGCAAAGGATATTTGGCACAGTGAAATGACTGAACAGAAAATTAGTCCTTACTAATTTTTTAAAGAAGATTTTGTAGATTTAAAATTGGTCTTTGAATTTGAGGGAGAGGGCATAAAGAAAAGCCGTGTCATACAAATCTGATATTTTTGCTACAGTATTTTTAAATTACATTGCCTGGTGTAAGTACACCAAATAAATTCTATTCTTGAATATGTTTTCCTTATTTTAGAATCTCCTCTTCTGACTGGAGTGCCTTAGCTTACATGGACAGATCAACGTTTGCATGGGTTTTCTTTCCCACATAATTTTATTTGTCATCTAATTTTCCTATGTTTGCTTTTCTTTAAGTTGCTTCCAAATGTATAAACATGTGCATTCATGGGTAATATATATTTTACTGATGTGCGCGGATTTGTATGGTTTAAATAACTCCAAGTATTTCACATCAGTGAAAAACACTTACATTTAAAATAAACTAACCCCTGACAAGATATCACATATCAGGGTGTGAGGCTCATAAAGCATTGCAGATAACCGGAGTCTGTAGATACCTACCGGTTTTTCTAATGTTCTAAGTGAAAATCAATCTCTCACCATGCCACACTGTTCTTAATTTGGAGTGTCAATGTAGTTATGTACTGTTTCTCATTCATAGATATCAAGTTCTTTTACAGGGAAGGTAAGTATCATTGTCCTCCATCTTACAAATGGGGAAATTGAAGCACGAAGAAGAAAAATGACCTTCTTCAAGGTCACCCAGTAGTAGAAAGGCACAGCCTGGGAACGAGCGCTCTCACTAGATTCTGCAAGTGCTGTCTCCTAGATTACGCTCCACTTCAGCAGTATAGACTGACACTTCAGGTTTTGTCATCATTCTTAATTATTCCTTCCTACAATACTTGGTTTATACGTGATTGTTAAGGAGAGATGTGAAAAACAACAGACAGTTTCTAGATTATTTTCCATTACGTGAGACTTTTGAAGTCCAAGTACAAATATAGTTCCCAAAATCAATGCGGCATAGGCTTACTTGAAAAAAAAATACATGTATTATTGGCTGTGGCATCTGTTGAATGTGAGTAGCTAAAGGTGGATTTACTCTGATGAGAATTCGTAAAACTCAGTAGGAGAGTCTTACAGTAGCTGGATCATGTGAATGAGAATATATGTAGACTCTGCATCTGCAAACTGAATAACATGTTGTATTTTCCATGAAAGTGTTTCCTAATTTAAGAAAATCATCAAGTAAAGTTAGTCAAGCTTCAGATAAGATTTGAGTATTGTAAGATGAAAGAAATGCATACATTTTTGCTATACATACACCAAATGGAAAATTCTTGTATTTCATTTACTCTTAAATGAACAACTGAAAATCCTATAAAACTGAATACTTACCTTCAAAATGCGTGTAGTTTGAGCCTGGTAAAGTACATAACTTTCTTCTCCTTTAG
Seq C2 exon
AATGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCTGAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATA
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000009287:ENSGALT00000015107:11
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.778
Domain overlap (PFAM):
C1:
PF0017016=bZIP_1=WD(100=68.1)
A:
NA
C2:
PF0017016=bZIP_1=PD(26.2=47.2)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]