GgaINT0066893 @ galGal3
Intron Retention
Gene
ENSGALG00000015624 | VCAN
Description
NA
Coordinates
chrZ:61360990-61374987:-
Coord C1 exon
chrZ:61374694-61374987
Coord A exon
chrZ:61364185-61374693
Coord C2 exon
chrZ:61360990-61364184
Length
10509 bp
Sequences
Splice sites
5' ss Seq
AACGTAAGC
5' ss Score
7.35
3' ss Seq
TTTTTTTTTTTTTTTTTAAGGTA
3' ss Score
12.16
Exon sequences
Seq C1 exon
ATGAAGTTGTTCATGTTTCTGTTCCTGAGAAGCTCACCTTTGAGGAAGCAAAAGAGCTATGTCGGAAAAGAGATGGTGTTCTTGCTTCTGTTGGAAACATGTATGTGGCCTGGAGGAATGGATTTGACCAATGTGACTACGGCTGGCTGGCGGATGGAAGTGTTCGTTACCCTGCCTCTGTGGCAAGGCCCCAGTGTGGTGGAGGTTTACTTGGGGTGAGAACCCTGTATCGCTATGAGAACCAAACAGGCTTTCCTTACCCAGATAGCAAGTTTGATGCCTACTGCTACGAAC
Seq A exon
GTAAGCTTTTTCAGTTATAATTTTCAGTACACTCACTGTTCTAAGTCTGAAAATTGTTCACTATAATATGTTTTGTTTCAGTTCTTGAAGTGCACAAGTCCTTAAAAAATGTTTTATCATTATGGCTTTAAAAAAAATAATAAGAGAAAGGCCAAGCTATGACAAATGTCTTAAAGTAACATCTTGGCACATGATGCAAAAANNNNNNNNNNTAGTAAGTTTGCACTCCAGCAATTTTGGGTTGCAATCAACATCATTTCAGACATAATTAAACACTGCTAGTTAGATGACTCAGGTTTTGCCAAATATACCTTGTTCTGTGCAGGGAAAAAAAATGGAATATACTACTGAATTGTACACCCCCCCCCCCCTTCACAGTTACTGAAAACCCTCTCTCCCTCTCATAAGGTGCTTAAAATTTCTCAAAAACCATCTGCAATTCTCCACTGCTTTTGTTAAAAGACTTATACATGTGGTAGTGAGACTGTCTAGTGTTTTGGTCTTTCACATCCCAGGCAGCTGCCTGAAGTGGTAACTGTAGTGAATCACCCTCTGTCCCTTTTCTGGGACAAGGAAAAGGGAAAAAGTTAAAAATGGCTCTGTAGCATAGCAGGAGATGTGAATTTTAGTCTTTGTTTCAAATGATCCTTTATATGGAATTTTCATCTGAAGTTTCCCAATCGGCTCTATTTCAGCACGGTAACATACCACATGAAGTCCTCTGTCCTGATGCTCTGAGTGCTTTTAACTTGATATGAAGCAGTGATTCCTTCAGTGCCAAGCAACTAAACATTCTTCCCTAAAACCTTGATTCCTTGCAGTTAACTCTAATACGTTGCCCATAGCTCTTGCTATGCTCATTATGTGTCTGATATTACAAAACATTTCTGTGGCTGAAAAAGAATAAAAAGGGGAAGTGGCTATGCACATCTGGTGCAAGAAAAAAACACCGAGTACCTCTGCAAACAAGGAAGGAACAAGTTGCCTGTCAGGTAGCACCAGTGCCAAAGGTCTGCAGCACAGATGTTCATGCAGTGACCTGAGGTTTTTAAAGCATCCCTGTACAGTTTCCTCTGCTAGCAAAGTTCACATTGATTCAGCCTTGAGTGCTGTGCCCACATGCTGATATAGTTTGAAGCTCAATGGCAATGACTGAAGACCTGCATCTCACACTTCTACTCATGCTGAGCAACACTTTCCTCCCTGAGTAAGGCCACTACAACAAATGCTGCCCTGCCCAGCACCAAAAGGAATGAGTCTAACAAATTTACATATACTCTGAAGCAATAGGCCTGTGGCAAAGCAGGCAGCTGTTTGAATCATTATGATGACAAGTGTTGAGTTTAAGAAAAGGGATACCTCTTTCTTCCGCCTTCTTAAAGTCTTTACTCCTAACTTGTGATTGAAAGTATCTGAGATCAAAAATCACAATATATTTATTTTAGATTGCAGTAGAGGAAACCTTGACTGATGCTATGAAAAATCTAACTTTCAGATTCACAGTGATCAAAATATATATATAAAAAGAAACATAACTCAAGCTGTAAATTAAAACCAGTAGGCACTAATTTCAATAAAACAGCTGACCTGGACAACATTTAATAACTTCAGTTCTTTTCTGGCTATATAATTACATTGTGTGAAGTGTCTTTACTTCTGGAAAACAGAAGTGGCCCAGACTAATAATATATGATTTAAAATCTAAAAATCTTGTTAAAAAATAACAACCCTCTTCACTTTGATCACCCATTTTTCTTATTCTACAGAAACCACATGTCTCTGAGTTTCTGAAACACTATCCATGTGTTTCATCTCATCCCTTGACTTTTGCCAGACATCTTACATCTTAGTTCTTTTTTTTTTTTTTTTCCTAAGAGGTGCCTAATCATGTATCTGTTGAAGGTTGAAAAGGTTTCAGATTAGACACATGATTAAGTACTTGAAGCTCCTTGGGGGCCATCGTCAGGGGAAGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCAGACAAAGCAGACATATATAAAAAAAAACCACTCACAAAAAAGAAAAAGAAAAACAAACAAACAAAAGAACTCCACACAAGAATTAATGGTAGAACAGTTGTAGAACACTGGCATTTATTTATAAGAGAATAAAACGTGGTTTCAGCAAAAAAAATTCCTTCATCTTTAATGGATACCTGTTTAATATTTGATTGTTGCGTAGAGACATAGGGTATTTATTTAACCCCATTCTCACCCCAGCCTCTTTCTCTTCATGCTTAATTCAGTGAAGCATGTGGGAATCTTGCCACAGCCTTCAACAGACTTTGGACTAGGTGTTTCGTACTGCATTATCTGTAGAATAAATTGTGCTCTAGAAATGCACTAAATGATATCTGTGCAGTTTTTGATGTGCATATCTGTAGCAGAACTGAAATAGATATACACAGAGGTCAGTCAAGCTTTGAAAAATAAATATGTGTTTTGCTGAGAAATGCTGGTTTATCAATGCTGAATACTTTTGTAGACCTGTATGGTTATTGTGAACTCCTCAGTAAAACATTTTTTGCTTGACTTAAAACACCTGTTTGATATTTCGGAATAATTTTATTCTGGATTGACCCTTTTGTTTTGTATTTGCTTTTTCATTTTGACTTTTTATTTCATGCACCTTCACTGATTCTCTTTCATTACACCGTTTGGTTTGGCTTCATGATTTAATTTTAGCTGGGAATTAGAAAATTCCATATCAGAGGGAGCATTGCCTTACGTGGTCATCCATGAACAGTGTCTGTGTTCTTTTGTTTCAGTGGAGCTGCACCAGGAGTGATTTTAAGTTATCTATTTCTCATGAATGGGTCTTGCTCATTTGCTACTTCATCTGAAGTTCAAAATCAGTGCATTTTTACAAAGAAATACAGGAAACAACAGTCTTCATAATATGTAACAGGACACATCTTTGTAAGACCCAAAGGGAAAATGCATGTCTCTATGCAGGCTTCTCCCCTGTCAGCACCAAGGCCTCTCCAATCTGAACTCTCTGTTTCTTGTTATTTCATTTGGTACGTTTCACTAGGATGTGGGTTTTGGTAACTTGATAGCAATGTTTTCCATAGAAGTGGGTAAAAAGAAAAAGTTAGAAAGAAAAAAACGTCCTCCAGCATTAGCCATCATCAGCAAACTGCTGAGCAGGAGCATCAACTGTGCTTAGCTTGTCTGACAGAAGAAAGGACAACATTTTTAGGCACTCAAAAGCTGGCAGAAACATTGTTGTCTATCTGTTTGCTGTGTGTGCCTTGGTTTTGAAAACTTCAAATAATTGAGCAGTCCTGTCCTTCTCCACAGCAACCATCGATAGCTGCATGTCCCACCTATTTTCTGTATGGGAGGATTATTTCTAGCCTCAGGGGCAGCATTGAGGGAGATTTGTGGGTTTTTGATCTATTTGAGAATGGCTGCAGAAGGCTGTAGACATCAGCTATAGTGATACTCAGCACATAACAATGTAAACGTAGATTAAATTTTTTAAAAACAGTTTATCTTTAGAGAAACACAGTAGAATACAGATTTTGTCAAAGCCAGCATCCTCCACCCCTTTGTAGCTCAGTTTAAGTGTCAGCGTGAGCAAAATAACTTTGAGCAGGCAAATGTTTTTAGGTGATGGTGCTGGCCTGTGAGTACAACAACGTGGGCTGTGCACATGCTCCCTTTCCTTTTGTGGAGTTGAGGCCTACTGCAACACAACAGCTCTATGGCTTTCATTATTTTGCTCAGATGGTGGATTTCTATACCTCTCCCAAGTACACTGTTTAGCCAGGCCTACAAAGCAGCAGAGCTGTCCTGAAATATCTTGGGCTAGGTGCAGGAGGGCTAAATCCCCAAGCTCCCTGAAGGGTCTGTGGGTGAATGTCATGAAGGCTGTGCAGAAGGACAACTTCTAGTGGTTCTAATCTCAGCCTGCCACACTTACAGAGTGAAGGGATTTTGTGAAAGCATCCAGAGCACACCAAAACAGGGAAGGAATTCTCTGTGCCACACTCCTCCCTAATACCTGTAGAAGGAGGAGGAGGTGGTGGCTGGGTGCAATTTAACCTTTTAAATATCATATGAAGTGTAAAGACAGGATTTGATTTATCCTGGACCAAGCCCTGTAATCCAGCTGCAGCCCTTTGGTGCCTCTGGAGGTACAACTCCAGGTGCGTGCACTTCTATTGCCAGAGAATGCAAACATGCATTTCTCTGAGAGGTCCACAGGTGGGTTGCTGAAGCATACCCCTGAGCACAAACACTGAACAGGGAAGGAAAGGGGTTGCAATGGGAGGCATTTTCCTTTCATCCTCTCAGATGAAAAAGGTAGAAGGTCCTTCTCTTTGGGTGTTTAAGTACAGGGAGGACAAAACCTTTTTGCTCTTTATTGCCTGTGCTCATTGCTTTGGGAGCTGCATACCACCCATGGGACATACAGGTGATTTGTCTCCTTTCACAGTGGGTGGTGAGAGCAAAGCAGTGAGATTTTTTGTACCAGTTCCTGACAGAAGTGACAATCTTGGCTTTCTTCATTCTTCCATCATTTATTTTTGCAGCCAGAAAACAAAGGTTGTTTCTTCTATTTAGTGCTGAGATGTGGACTCTGTTAGGAAGAGCTGAGTGAAGAGGCTCACCTAAATTTTGTTTCCTTTGGCAGTTTAATTATAAATAACATGGAAAGAGAAGTACTTTTTGCTGTTGTTCTTTTTGTGTGTAGGCAAGTTATAATTTGTTCACAGAACCATATTTACATCTGGAGAAACTGAGGATAACATCCTTCCCCCCTTAGTTGCCTGACTTCAGATACTACAAAACAGCAAATGGTTTCACTTAACAGTATTTGTGTTTGTAGTGCTCATGGTGCTGCTGTTCATGCTGCTTTGTTAGCTGGAAGGAAGCAGCCTTAGCTGCTGATGACAGGAGGATGCATAACCTTTCTTTCTCCAGTTTTTCCTTTCAGATAAGATAGACTGTCAACTAGTTATTGATTTGAATTATTACTTTTAAGAGTCCCACTTAGTTTCTCTGATTTTGCATGTATTTTTTAAGTGAGAAATGACGCTGCAGTCACATTTTTCATTTTTTTTTTCTCATTACATTTGGCTGGTGTTCTGATGTCAGAACACAGTGTAGGTAAGTGGGAGTATATTCCTGGGGTTATAGGGAAACTGTATAGCTGTAACATCAGATGTTGAGGCCTCCATGTGATATCACATATCCCATGGATAGTGATTGAGAATGGATATCTAGTCGGTGTACTACTGACAAATTTTTGGCTCTGTATGTAGCCCAAAGTTCCAGTTTTTATTTTTTACTGTTCTGGTCTTATTCCTGGAGTTGTCCAGGCTGTGAGGTTCTGCCCATAGTTTAAACTCCATCTGGGCACCCTTGCAGGGGAGCATTCAAGACAGTGCTGTGTGCTGGGGCAGGTGGCAGGGGAGGAACAGAGACTCAGAGCAAACTTAATGAAGTAGCAGGTAGGAATGGACACCTCACAGTATGTAGAAATGAAACACAGCAAACTGCTGGTTTAGGCGCCATACTCAAAATGAATGGAGGATGGAAGATGTCAAACCATTAATTTGGATCTTTTCAACATAAGTGCTATTCTGGAAAAATTTCTTTTGGCTTCTGTGATTCATAGAAGGAATTCAGCATTTACAGATTTTAGTGTGACTTAAAACTTTTTATGTTTTTATTTATTTTTTAATTGTCCTAGGTGCTGACAATGACTTGAGGAAATCTCTTTTTCTATCTGTAGGGTCTATGTTCATCCAGGTTCTTACATACCTAAATGCAAATACAAAAGCAGTATTCCCAAGTGCAAAGAAACTGTTCCAGTGTCTCATTTTAGACACATAGTTAAAGTTCTGTGGAACTGACTATGCTGAAAATGTCATATATAAACGTCATAATATAGATAATGTATGTAATCTTTTAAAAAAGTATTTTCTCCTCCAAGAAGTACACCTAGATATCCTGAACGTATTATTAAATAGAACAGAACATATTAAAATCCTTTTTTGGTAGTTGCAAAGTTAAACCATGTATAAAGTAGTGTAGTGTGATTTCCGTGAAAAAATATTAAGTTTTAATATTACTCCATTATTTTAAATCCTTCTTTAAACAATAGTGGGAGAGAAGAAGAAGAAAATGCTGTATAGTGAAAGCATAAAATAAATAAACAGAGAATGAAAATGTGCAGTATCTCTATAAAACCATATACTCCATCCAAAATCAACTTAATTCAGACTGTTCAATATAAAATGAATTGATTAAAAACCTGAAAGATAGCCTTTGATATGAACAGCTGTTGGTGAGATAATTTACTTTCTTGCTGCTAACATGTTCATGAATTTTATTAGGAAAATCTGTCTCATGACTTGCATAAGAAGGACAGAGGAGCATATTGCATGCATGACGCAAGGAGTACAGTAATACAAAACATCTGGGTGGAAAGGACAACAGTTCAAACTGATGTTCAGTCTACTAAAAAGGCAACCTTCTCTTTGGTTTTCTCTTTTCCCATGGAAAGAAAAGAAAAGAAAAAAAAAAAAACCTCTGATAGATTTCCCATGAAGAAACTCAAAACACAAACTCAAAAATGTCTGTTAACGTGAATAATGTGTATGGAAAGCCTTATGTATCACATTTATGATGAGACAGTTTTAGAGGCCCTGATGTTTATTTGAACCACAATTGCTCTTTGTATGTTGGCGATTGCATGTCTTGGAAAAGAGAAAGTTTGGCTGTTCATTGATAAATTATTAAAAAATACATACATTTCTTATAGCAGTATGTGAATTCACATTTGCTGAATCAAATACACCTATTATTTGGTCAAATTTACTGCCTGTGTACTGATTTTATCAGTGATAAGCAGATAATTATAGGGAACAAAAAGTAAGTGCATTTGGGCACAAATCTGTGATCTTTTGGCACTTGCAAACACTTCCAGGAGATCAGGAAGTTACTTAAATTTCCCAGCCGCAGGGGAATGAAGTTACCTTTCATTTCACTGTCTATAAAACCGACTTTTGTACCCTCATTTTTATCTGGCTTTATAAGAGACCATTAGATACCAATATTCTTTCAAAGAGTGCTCTTAATTGTCTCTTAAAGAAAATCAATTCAGGCACTAAATTGATGATATTTGCTGCAAAACAAAGTCAGTCTTCGTTAAGAAAATGCATCCTGTGGTCGAAAGGGATAATATGGGGCTATGCTGTTTGCTTCCCACTTTTCTGTACAGAAGAGCTGTGTGGCAGATCTGTGGGTTCTTTGGTGTCAGCATAGCAATTAGCTGCTGCCACTCAGCAGAGCTCTTCTAATTTACTTTTCACTCCCTGCTTATGAAGAGAAACTCCATGCTTCGGACCACCCTGTACGCTCAGTGATGAAAACACTGTAAAGCATAGTACTTTTTAAGGTGTTGATTTTGGGAGCAACATCTCACATTCAGAGATCATAGGTACAGAAACAAATAAGTATCCTCTTCAGGTCATAGGACACTGGAACTCAAAAGTCACTGGCATTGAGGCTGTGCTTTGCTTAGTGAGCTTTCAAGAATTCTGCTCCTACTTGATCAACAGCTCAACTTTTGCCTACAAAAAAATGCATATAAGTGGATAAATCTTCTTTATAAAGCCACACACACACACAAGATCACATATATGGTAGAGACTGAATCTATTCCTTTTTCTGCTGGCAAAGAACATTGTTTTAAACACAGCAACATCCTGTACTTCTACCCTCACAATTTCTTTTTCACTTTCACTTCTTCAAGAAAGCTGAAATATCAGTGTTGTTGTTGGTTTTTTTTTTTTCCTTATTCCAGTGCTCTGTAAATCCACCTAGATATCCTAAGCAGCTAGCATCTGGCAAGAAGCTTCTGTCTTCTCTGAGGTAGATCAAATAGCTCTTTTGCAAAGGTGACATTTTCAAAGTTTGGTGTGTGAAACTAAACAAATATTTGCATGACCTTCACTTGCACAGGCAGAATCCACATATTCAATATCAAAGGCTCACCCACTTAGGCATAGTTGTGTGAAAGTAACCGATCTGTGCATACACACTAGGTTTGCTTGAGTGTAAATGGTCACTATACAAATATATATGACTACAGTTGAGCCTTCCTAAATATTTCTCCCTTGTTTACATTCTGTTATTTCTGCATACTCTTAGCTCCTTTTATTTTTCCTTCTTTTTTTTTTTTTTTTTTAATTTTTTCCTTTTATTTTTCAGTGTTACTGAAGTCCCAGGTCATTATCCAGAACATCTTCATCTCTGTGCCAGGCAGTAAAAATCCAGTTTCAGAATGCACTTTTCCCCCAATAAGTAACTGGTATTCTTTCCTTACATTGAGTAGAGTTTCCTGGTCTTTTACTATCTCACAGCAGTAATAAGAACCCTCTGGTTTCAGGCTTGAGTCACAAAATATTGCATCTGATTTGATACTAGCATGTTGGAGGAACAGATTTCTTTGTTCACATAGATGTTTAGCAGTATTTTCTTTTGCAAGACGCCAAATGTCTAGTAATGTCTGTCTGTGGTAAGTTGCTAGTTCTCATATATGCAATCTATCTAATGCATTCTCCTTATGCTTGGTGTGATGCAAAAGGCCATATTTTGCTCTTAGCTGGCATCCGTCCAAGGTTTCTGACTCTTTGTCACTTGGAAATGAACAGCACTGATTTATGACTTTCACACCTTCCACCTCTCTATTACCGTTGCTCTTCTGAAGATTGCTGGCCTAGAAGAACTGGAAGAAGGGGATACATATCTACCTAAGACTTTTCCTGAGTAAATCTTGCTTTCTGAGCACAAATTCACCTTTTTCAAGAGTTGTAATTGCAATACCAAACTTTGGAGTGAAATGGTGCATTTCCTGCTCTGGTGAGGTAGCAGTCTGTGGCAGGATTGGACAGAGAAATGGCACCACGATCCTTTAAATCATCACAATTTGGTTCACTGGAAAGACACAAAGTTATTTGCACCTAGTTAGCTATCCAGCATAGCTACCCCTTACTGCTCACATCATTCAGGAGGTTCAACAACCTGCTTTTCATGTTCAGCACTCTCGTAGAAGCACTTCTGTCTGTGAAGGAGGTTCAGAGTTATATCTTTCAAGTGTTTTCCAGAGATCAACATCATCCTAGCAGTAAGTTTATGGTCTTATGGTTTACTGTTCTCACCTTTCCCCGTAATCAGAATTTCTCTCAGTGTAATTTAAAGCAGTGTAGCAGTTCTTGCAGCATTTTAATGCAGTATGTTCCAAAGCCACATTTGTTCCTGCTGCTCAAGCATGCTCTCCAATCGGTAACTATGCATTGAAAATAAGCTGAAATGCTGTTTCAGTTCCCTTATGCATTTGAGTTGTATGCCATAGTAAGCTTTGAAGAAAAACCACAGATTTGCAGTACCACTCATTTATGACATTGTGAAATAAACTTCTATATTTCCTGATCAGTACTTAGCTGTCAAATAGATACTTGTATAGTATTAGGACACCCAGGGATAATTATATAAACAACTGCTCCTGTTCTCATTTCATCTGACATTAAGTTACATGGAACTTAAATAATATGATATTTATGTCACTCAGAGCTCAGTTGTATGCTCAACAGTTATCTAAAGCTTTTTGCCTCTATACTTATTTCTCAGTGTAACATGTAATTTCTTCTAGGAACATGTGAACTAATTGAAAGTATTTGTAATATTACTGAATGATTCCTTAACTTTTCTTTATTCTCTTTTTTTTTTTTTTTTTTTTTTTTAAG
Seq C2 exon
GTAAAAAAATTGTATCAGAACCTACAACTGTTAAGCTGGTTACAACTCTGAAAACTGACAGTGTGGAACTATCATCTGCTAAAGTTACTCTTAAACCTTCTGTTTTTGAGAGTTCAGTTACTGAAGTGGCTGTCACCAAAACAAAGGTCCCTGCTTGGGAGGAAGCAACCCTAGAGACTGAAGATACAAAAATGACTACTGAAGTGGCTGAGGAGAAAAGGGAAATGGAGGTGCTTATGGAGAACATTAAGTTAACCACCCTTTTACCTCAGACTGTCACAGATGGTGAAATAAGCCCTTATGATACGCTGGGAAGGACTGAATATGATGTTTCACCTAGGTTAACAGAGAGCACATCTGCAGCTTTGGAAGTGGAGCACACTTACTCTGAAGCAGAATTGTCCGAGGAACAAGGTAGGTCTGAAAGCACTGAGGACGCTTTCTTGACCTCTGTAGTTTTTCAGGATAGCACAGCTGTAGCTAAGAGTTCCACTGGTTCATGGGAAGATATTGAAACAGGAGATACACAAAAACATGATGGTGATAATCAGACTGAACAAATAGAAGTGGGTCCTGTGATGACAGCTACAGATAGCTTGGTACCAGCTTCTCAGAGAGAGTTGCCCAGGACAGGGTCTTCAGTTTCACTAACAAAAGAAAATCTGTATCTTGGTTCTCACTCAACAAAAGAACCCACAAAAAAATCAATGGAAGCAAAATCTGACAAGAAACTTACAACTGTTGTAATCCCTAAGGCTTTGTTCACTGATCAGTATGATCTTACTACAGAGGGGGAGGGAAGAGAGAGCATGTACACCGTTATGCCTGATAGAGTTTCTGGCGTGGCTCTGGTTAGCATCCCAGAATCAGATGTTCCTGCTGTATCAGAGACACTCATGGATGAGCTTGCGGTAACCACTGGACAATCTTCTACAGCAGATGAGTCAACTCCATTCATTAAATTTAGTTCTTCTGCAACTGAGTTGGATAATGAGGCGTCAGCTGAGGGAAGCAGAGAGGACTTAAAAGATGTGCATCTCACCACGTCATCTGGAATACCTGTATCCTTTACTTTATTCACCGCCAGTGAGACAGGATCTGAGGTCACTGCTCTCTCAGAAAGTACCAGTGCCCCACAGAAGTTTGAAGAAGGCATCACATCTGTTCTTCACTCATCGCAGCAAACAGAAGGATCGGCTATTTTAGAAAAGCAGGAAAAAACAAAGGAGCCAGAAATGAGTACAATAGATGCTAAAGTCCTTTATATCACAACTGTTGTTCCTGCTTCTGTTACGGCAGGATCTGAGGGACGCTTTGGAAGTGAGAAGTTCACGCACACTCCTCCAGTTTCTGGCATGTGGCTGCAGACAGATAAGGATCAGGTCTACATGACAGAAGAAACATCTCATACTAAGAGAATTGAGTTAGACACTGAAGATGATATCTCTGGAATGGAGCCTACATCATCTCCAGGGCAAATTATAGAATATACAAAGCATCTAGGAGCTCCAGTTTCAGCAGTAACAGATGAAACCAAGACAAGCATGGAGACAGCAGAAACAGAAAGTGATGAAGAAGTAGTATCAGCTGATTTTGATCAGACTAAAGGTACTACAGAGGTCTTCCATACAAGCAGCTCTTTAGATTTGGAAAAGTTTACTCTATCCAAAATACCAGAGGATGAAAGTAGTGCAACAGTGAAATCGTTTAGCTCCTCAAGTGGTACTGTGTTACCAACTGCTGTGGCCACTGTCTTGGAGGTGACTGATCATGAAGCAGATGAAACATCAGGATATGTTTTGAACATGACCTTTTCTACCCCAGAAGGTGAACAAAGAAAGGCTACTGAGAAATCACCTGCAACTTCTGCTGAAGATGAAGTCTCTACAGGAACAGAGATCTCAAAATACACAATGACAGAAGGCGGCCAGATAAGCAGTGTGACATCTGCTGAGAAGGAGTCAGTGGCAGCACTTCAGGAGAGGGAAGAACAACCGTCTGTTGGCTTACCAGAAACAAAGGAACCCTTTAAGTTTACAGATGTAACAGAGATAGAGACTACAGTTCCACAGAGAGAAGGTGATACTTCCCTAGTTCCAGTCACTGTAGGTAGTGAGGACATTGGAGAGATGCAAGTTACTGACCATACTTCTTTTGACAGTATCATTCATACTGAAGCAACAGTAACAAGTACAAAAGCTAGTGAAGTGTTTCCTAAGGAGCTCTCCACAAAAGATCAAGATAGGGAACTAGGTACTGCCATGGGGTCTACCTTACCTGTGACATCTGTCCAAATGCATGAACAAAAGACGACAGCAGGATTTGAATCACCTCAAACAACCACTCAGGAAAAACATGACGAGATGGGTTCAGCCTATGATGAGATGTATCCAGCAACAGAATTATCAGTGCCTGCATTAATGCTTACAGAATATGGACAAGTTTCAGGGCCTGTTGAAACTAGCACCAGGTCTTCGCATCTCACAGGGACTCCCAAAGCTGAGACTGCTACTGACCAAGAAGAGAAGATTACAGAAGCAGTGCCTGTAACATTTGGTACACAAGCAAAAGTGTATGAAAGCAAAGGAACCACCACAAGGGAAGAAGACAGAGATGTAGGAAGCTGGAATTCTGTGTTGCCCCCCCATACGATGCTGAGTAGTCCTTCTACTGCAGGAAGTATTAGTCTTCTGACTTTGGGAGCTTCTCCAAGTCAAACTCCAGAAGGTTCAGGAATATCAGAAGAGCTTGAAGAAGTCAAAACAGTTCCATTTTCATCTAGGGCAACAGATAAGACAACTGTTATTAGTGATTTAACTACATCATCTATTAGCGCTGTAGACAAAATTCAGCCTACATCAGCATCCAAACCTTTTGTTTCTTCAAAGTCGCCACGTATTATTCCTGAGGAAGATGAGGAGGTAACAAGCAGTGACATCATAGTAATTGATGAATCTATTTCTCCAAGTAAAGCCAGTGCTGAAGATGATCTGACAGGAAAGATGGTAGAACCAGAAATTGATAAGGAATATTTCACATCATCAACTGCTACTGCAGTTGCACGGCCTACTGCACCACCCACAGTGATGGAGGCCACAGAGGCCTTACAACCACAAGAGGTGTCTCCTACTTCACACCCTGACAGTGGAACTGACATAAGATTGTATGTTATTCAAATCACAGGCAATGATACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000015624:ENSGALT00000025190:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.822
Domain overlap (PFAM):
C1:
PF0019312=Xlink=WD(100=98.0)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]