GgaINT0077283 @ galGal3
Intron Retention
Gene
ENSGALG00000014419 | Q90XG3_CHICK
Description
NA
Coordinates
chr4:77787638-77802554:-
Coord C1 exon
chr4:77802413-77802554
Coord A exon
chr4:77787710-77802412
Coord C2 exon
chr4:77787638-77787709
Length
14703 bp
Sequences
Splice sites
5' ss Seq
AATGTATGT
5' ss Score
5.87
3' ss Seq
CTCATGCTATTGTTTTGCAGACG
3' ss Score
9.05
Exon sequences
Seq C1 exon
CAGGTCACCAATCATTTATGGCTCCATCCTGCAGTGTCTTGCATTGTCCTGCTGCATGCACCTGTAGTAACAACATTGTGGACTGTCGTGGGAAAGGCCTTACTGAAATTCCAACAAATCTTCCAGAAACCATTACTGAAAT
Seq A exon
GTATGTAATCTTACTTTTTTTCATTCTTTCAATGAATATGCAGAAAACAGTTTGTCTTATGTATTCATTGTTATTATTTGTATAAATTCATACTTTATTATATGGTAAGAATTTTGGAATGCACATTCAAATTCAGAAATAAAAGGAATATACAGACGTGTGAAAATATTTAAGACCTATATATTCTATTATGAGTTAGTTCTGTATGTATTACTCACAACCCATAGTTGAAACTGCATTCCGAGTTGGTTTTAAAATAATTCACGAATATTTACTTTTTTGAAAGTAAGTAGCTTTCTACTGCAGACTGTAAATCCCTTTGTCTTCAGTGTTGCTCACTGTCACCTTCTTCAATTGACTCGCTATTCAAGGACCATACCTTTGCAACAAATACAGCAGTCTTTATCCCTTGTAATAACAAGTATTGCTAAAATAGCATCCTAGAAGGGTAATCTATGAAGGAAAAAATAAGGTATTTGACTGAAACCTGTGGTTTAGTCATTGTGCTAATACCATATATCCATGAATGGAAGCAAACATGCTGATAAGGTTGTGTGACAAGGCATAAACAACAGCAGCAGCTATAAAATATGCAACTGCATCCCAATCAAGCAGAGTTACAGCAAAAGTGCAGTAGGGCCTGCAGGCTTCCTGTAATCACGTTTGTCAGCTCATTATTACTACTGTTAAGACTGACCTGGCTGACCCTACCTGACCAAGTTCAGTCATACTAAGCAAACATGTCTTCTACCTTTCACCCTGCAAAGACTGTCTTCATTATTTAATAACTTGTATGCTGACCTTTCTTACTTGCATATGTATATTTTTGTGCACAGAGGAAAATATTGCAGGAAGTAAGTAGGGTATGTGTCTCAAACACCCTCCTCTGTACTTCTGCTGCTAACTAGTAGTTGGCTGTGCTTACCAACTGTGCTTCCAGTTGAGTGGAAAGTAAGGAAAGAAATGTACAGGAAAAGGAAGATGAAAAATAAAGGACATAAAGGCCTTTGAAAGGCAGGGATAAACTCAGTGAAAAAATTAAAAAGATATTGTGACTATTTGATGAGAATCACTTGATCTTTGCTGCTTTCTTGTGAATAGGTTGAAGACCAGTTGAGATTTTGGCAAATAAGTATTGTATGCCACTAGTTGCTTTTATGTGATAAAACTAGTGAAATTTGACAATTTACATATCTTCCACAAAAATTGTTTGTTTTTTTTTTCTTTGAAACACTTGATCTACTTTAAATCCTACTGTTTTCTTAACCAACATGTTATTTTAAGGTAATCCATTGCTTGAGGGGGGAGCAAGGGGAGTGAATTCAAGGCTTCTAGCTTTAAATATAGTTGTTCAAAATGACGTTAATTTTCTTTGACATTGTGGAGGAATGGAAAATGCATTAAGGTTCATAATTTGTCCTGCCACCTTCTATTTTCTATTTCACCCTCATTCCTCTCTTCTCTCATCTAAAAGTACCAAGTCTTCTCTGTTTTTCTGAATACCAAAACCTTCCATTTCTTAATTAATCTCCTTTTCCTCCAAACTCCTTGTTTTCTAATTTTTTTTTTTTTACCTGCAATGACCAGAGTTGGATAAAATATTCCAGATGACAGTGAAACATCACTATATAGAGCCATTTTAGTTTCCTTTCATTTGCCTTCTGCACTGTAATGCTGTCTTTCCTTACTGCCAATCAAAATTACACCATGTTCTCCATTGAAATTTCCATGAAGAGTCCTAGGTCTTTTTTTTTTTTTAGCTGTTACAGTTTTGTCAGAAACAAGATGTTTACAGATGTAATCTTATTATTCCATCTGTATTACATTTATGAACACTGAATTCTACTGTATCTTAACTTTTTAAAGCTGGTCTGTGAAAGTCTCCAATAACTAACTTCAACCTAAGACTCCACTAACATGTTATCTTCAGTATATGGAAAGATCCTGATATTTCTATCTTAGATTATCATAAAATAGTTTTTAAGACCTTCATTTTGAAAGAAATACTCTGCAACTGTTGTTATAGCAGCCCTTTATGATTAAATTAGAAAGAATATCTGTATCTCATAAAATAATATTTTTTTTCAGTTATTTTTATATGAAATTATTTTATTTGTGCCTAAGTGGAAACTGCCAATAAACATTTTGGATAGATGAGACCATGCTGTCACAGTATCATTGAGAATACTTAGGAGCTGCTGAACACTGGGCACAAGCAAACCATGAAGGGTATGGTGAGCACTGTACTTCCACCACCATTAAATAGTTCCCACACACAAGGCTTTATCATCTTAATTACAATTTAAAGCACATGCTTTGGCAGGAGCTCCTCAGTCAGGGAGAGAGGGAAACAGAAGCAAGCTGGCTCCCTGTTGTTTTCTGAAGGAGGTACAGTCCTTAACAGCCAAATTATTATTTATTTGGTGATAATACCGTCATCATCAGGTTCCTGTGAACAACATAAGAAAATTGGCATTATAGTTCTATTTTACATGGGCCTGATATTCTCCAGTCTTTTCAGTTTTCTTTCCATGCTTTTCAAACTACTTTTGCATTTTCAACTGAACGTTGTCTTCTGGTTTTATAAACACACTTCATTGACATAAACATTTGAAAATTCTGTAGTACTTTTAAATTTCTTTATTCTGGACAACTTTCTCTCCTCTTTAACTGTAATCGTTGTCATCTGTTTATAGGCAGTACCTGCAGAATCCAGTGCTGAGTACTACCAGCATTTCATGTCATGCTTCAGGCAACATGATGGCCCACAAACACCTTTTATGTCTTCTTCTTTTTATTTTTTCAGAAAGTAGATAAATTATGTAGACTTAAATAGTGTGCCAAACACACTTTAAATGGAATACTGAATAACTTAAGTACTGAATATTTGCAGTTTGGATTGAGTAAAATTTTGCATGTCAAAACTGTGTGTTATCTCTTTGAAGAAGAGTAAGAGGAAAGGCTTTGTGTTTAATACCTCATATTGATGAGCATAATACTGATGCCATGACTTTGCATTGTCTTGATCTTTCTAATGGACAACTGTTTTGGGATGACATTTTAAGACATGAGGTGTTATATTCTCTGCTGATGGCTACTGCCTCTGTAGCATTGTGGAAAGAGACCATATGAGACAGCAGGTTGTGCTGCTCTGCATGCTTTCTGTCACTTGAGTCTAGTGTAACAGCCTAAACTGCTGAGGAAAAGGAGTTTACAGTGGGAGTTAAGTGGTTTGCAAACAAACAAGTGTTCTGCGATGGCAGCAGCAGAAGGAGGCAAAACCAGTTACCAAAACACTGTTTGAGACTCATGCACTTGGATTCACCCATTAATGCTGGGGAGAGTATGTTGTTGTACCATTCTGTCTGAATTCTCAGTTTTTACAAAAATCAGTGAGCTAACAGTAGCAATTCTCATTGTGCGAAGTCAGTTACCAGGCAGCACATTGCCCAGTGCCTCTTGGGAAGATGCTGTCAGGAGCAGGACTGCTTATCTCCAAGTTGCTGCCAGGGAGAATGGAAGAATAAACCACTGATGATCCCCTTTTTCTCCCTTTTGGTGTAATAAAGTTCAGCGGGAAATTAAGAATTCAGTATCTCAGTAAATGTAACTTTTAATCTTTACTGGCTTAATACAATTACATTTGTACCAGCTACATCCATTCTGCAAAATTAATTCTTCTATTTATTATATAAATAAACTCACTGCTAAAAATAAGAATACCTAAGCTTTTCAGGCTCAATCTAATCAATATTATATTATTTAAGAAACATTTTACATTTATATATTGTAACTAAATTAAGGTCACTTGAGAACCAAGACTCCTCCAGTTTTAGTGCATGTACTAATTCTAGAGAAAGTACAGAAATAACAAGGAACCTCTCTAGGCAATCTTTAAAGGTTTCAGTTCATGAGTGACCTGCAGGAAGCAATTTGGGAATATTTCCCATGGTTCTATTATTTTACTGCCTGTATTTGTAAACATTATGAAACTAAAAACATTGCCAATGCACATTATATGTTAATAGCCTTCAACTTTTTGGTTTTTAATGTCTTGCATAAGCATTTTTTCACTTCAGAAAACCATGAGATAGTAGCTATTATCTTACAAGCATTAGACATTAGTAATCTTCAAAATTTTAGTATTGAGTGTGTCTATCTTAAGCCTTTTCCTGTGGTCTTAAGCAAATCATGACACAGTATCCATTCAAAAAATCATGGAATCCTGGAATGGTTTGAGTTAGAAAAGACCAGCTCCCTGTCTCATGGCAGGGACACCTCCCTCTAGATCAGATTGTCCGAGTCTCCATCAAACCTGACGAGTCTGATGGGGCTACCATGGTTTCTCTGGGCAAACTTTTCTAGTGCCTTATCACCCTCATAGTAAAGACTTCTTCCTTTAGTCTAATCTAAATCTACCTTCCTTCAGTTTAAAACCATTGTCCTTTGTCCTATCACTACACTCCTTGGTAAAGAGTTTCTCTCCAATATAAGAAGTCATAATATGACTTGGTTTAGATTTATCGTTTAAACCACTTCCTTTTTCCAGTGATTTGTATGGGATGCTCTTTCATTGTCATATTTGGTCTGTGAGTTCAACTAACTCCCAAGGACCAATGTGCTTAGCACTTTCCTTCTTTGTCACGAAGCTCATATATTAAAGACATTCTGGGTCATTCTTAAGGTACTTTAATTGGTTTGAGAAAGTAGAGGCTTTCTAACAGTGATAGCATTTATCAACCTCTGTGCAGGCATTTCTTCCACATTTTAGTTTTTCAGCACCATTAATCTCTTATCATTTGGTTGCATTTTAGAATTCACCTTCCATGTGCAAATTCTTCGACTGGTCTGCAGAAATAATTCTGGATTCCTTCAAATTGAGACTTTTTGGCAGTTGTTCAAACAGACTGTCAGAAACCCAGCAGCAATTTCATTAAACGTACTGATGCTTTTTCTCAGAATGGCGTGAGAATGGCTTCTATTTCAAAAGGAGAGGCCAAAAAGCCATTAATGAACTAGGCTGCCTTGTGAAAATGCTCTTCTTACTTTTGTCTGATTTTCTCTATGGCTTGAACTAGCAGCCAAAATGGTTCTAAAATCTCTTTCCTTTCTGTAGTATTATGAGCAAAAGAAAATAAATACATTTGCTGTAAGTGCTTGTGAGGGTGGTGATTTTACTGGGAGGGAAAAAATTACCTGCTTTGATGACCACTGCTTTGTATTAATGATTATTTAAGTAATCAGACATGGAAATAAGTTGATTTTGTTTCTTCAGTTTTGTTAACATTAACACCAGTTAAGTGATCAAAGGAAGGACTTAATCGAGTTTTGTCTTTTTTTATAGTAAGATAGCAGCTACTACAGTGGTGATTTGGGGATGAGGAAAGCTTACTAAAAGGGAGGGCGTCTGTGGGACTGCCACTGTTAAGTATGCAACAGTTGCGGAAATAATCTTTGGAAGGGGTAGAAAAGATACTATATCATACAATACATTAAATGAAAAATCATATAGGAGTCAGGAATTTTAGCAGTTCACATTTTTAACTTAGCATAGTGAAAAGTCATAGACTTCTTAATTACTGTGGTTTTCAAGATAAAGCTGCTTTTACTTGTGAGTGGAGCTTTCTAATGTTTGAATGCCAAAACCAGAAATGTCATGGTTGTTTCATGAAAATTTGATTTACATTTCCTTTGATATTCTTCTAATTTGTCCTCTCAGTCTTATCTCGTCTTATCTTCCTGGTTTCTACTATTTATCTTCATGTTACCATCTTCCTCTCTCTTATTCTCCTATACATTTTTATTCAAATATCTGTTGATTAAGTGTTGTGTAGTACGTCAAGTACTCAACTACTTTTTGCGAGCCCTGTGATATTAAGCAGGATTAACAGCTCCTAAGATGAGTGCTACTGTGAGAACCAAAATTACATTAAAGTAGAAGGCGAACAAAAGGCAAAAAAGAAGAGGAGGGGAAGGGAAGGCTTTTGGAAATGAGGACTGACAGAACTACAGTTGGCAGGTATAACCAAGATAGGGTAAAGAATGACTTGGTCACTCTGGACCTGCTGGGAAAATTCTTTATGTAAATTCAGAATTTTATTTGAGAACTGGGAGCTGTATGTATGAATCTTTTTCAAGCTAAGTTTGGCATGTATACAGTTTCACCATTTCTGTTGTTTTTAAATATCTGTCCTTAGCTAAAAGGTGAAAGTACAATCTTCAATAAATATATATTGATCAAGGAGGCTCTTATGCTGAGATGCAAAGATACTTCTGAGAATGCCCTTTTATAGAAAAAAGACACTTGGAGAGGGCTTAGGCACATTTACTGAAAAAGTTCAAAAATTCACATAGGAGAAAAACTCTGAAACAATGAAGATAAAGCAACTTTCTCTGTTTTTAGCAACTGAAAGTACGATTCAGCTATTTACAGTAACTTGACAAAAATGAGACCAAACCCAGCATCTTCAGAAGGCTTAGGATGCAAGTAGTTATGAGAAATTATATCTGAGATTGTTTTTCAGTGTCTGCATTTGCTTGTGCTTTCTAGTTTAAAACAGAACATTTGTCTTTTTCGTTAGCAGAACTAGTATTTATTCCCATTGCAGTATATAACAGCAAACAGTGTTTGCTTTATAAAAAATGAAGAAATTTGCTGAAATTGTAGCATCTTTCATATGACATGTGCATGTAAATGCACAATAATTGCATGTGAATAACAGAAAATGCATTATCTGAAAGGCTGAGTATTGAATAAATGTGAAACAAGTTAAAATTGAGTATAAGAATCTGCTGAGGTACTTGTCTTCTTTACATTAATGTTCATTTGAGTGGCCAACACAGATTTAACTGAATTAACTGTTAAGTGTTTGGGATTGCTACCTTAATATTTCTCACGGAAAATCTAAGATATTTTGACTATGAAAAAAATACATTGTTTTGCTATATTGGCAGCCAGTCCTGCTCACTTAACACATGATAGAAATGATTTGTCCTACTCTTACTCAAATATCTTCCTAATCTGAAAATTATGAGTAAACCGTGTGACTTTATACTTTCTTACAAAATTTTCTCATTTGAGATTTTAGACACAGTAGGTAGAATATTTTATCTGTTCTATATTAGTATGTATTCTGTGATGCCATTAGTCAGATCTTTGACTTTCTTCATATCATCATGCCCTATCTTGGAGGATGCAGAGACTGATTATTAACAATACAAATGGACAGGAAATGTTATTCTAAAGAATAAGGAGGACATGTTTAGGTGTGAAACTTTATAAGTATCATATAATCAATATGGTTGGAAAAGACCAACTGCCAATCCATCACCCTCATGTCCACTAAAACATATCCCTCAGTGACACATCTACACATTCTTGAACACCTCCAGGGATGGTGACTCTACCACCTCCCTACGTAGTCTGTTCTAATGCCTTACCACTCCTTCTGAGAAGTTTCTCCTGATAACCAACCTGAACCTCCCCTGGTGCAACTTGAGTCCATGGCTTCTCATGCTTACCTGTGAGAAGAGTCTTACTCCCGCCTTGCTACAATCTCCCTTCAGGCAGTTAGAGAGAGTAGTAATTTCTCCCTCAAGCATCCTCTTCTCCAGGTTGAACAATCCCAGTTTCCTCAGCTGCGCCGCATAGGACTTGTGAACACACAGCATCCCTAAAGCCATGTGCCAGAGCTGTGCATAGCAAACTGAGAGCAGATTAGAATTCAGTCTTGAATTTAATCTAGAATTTGTAGGGCACCCTGAAGCAGAACTGGTGCTGTGGCAGGGTGTTCTTCCTTGGTGATAGGAGTAGAAAGGAAGAACACCTTATTGCCTTCAGGCACCTTTTTGCCAAAATATAGGGGCAGTCCTGGCTTCCAGAAATACTGGGAGTAGGTACTGGTGAGAAAGAGCATCACATTGTTCCAACTCTGATGATTTTATGCTTCTGGTGGGTCGTGAGGTACCTTGAGATACTCTCTGTACTCTGCCAAGAGGAAAAAAAAAAAAAAAAAAAGACAAACTCGGGCATAGAATGAATGAATAATTTATGCAGTATGAAGGGAAGCTGCAGAAGGCCCATCTAGCTATTCCAGAAAAACCCTCATAGATCTCTGACAGCTGTGCCACATTCCAGAGGTGTTGTTACTCATTTTTACATATGGCTTTTCCTCAGCAATAATATATGTTAAGTTACTGTAAAAGAAATTATATGTTCAGACTTAGAATCATAGAATCATTTAGGCTGGAAAAGACCTTCAAGATCAAGTTCAACAAACTTTTTACTATGTTGTATTTCACCTTCAATGAAATGTTGCTAACTGTTGCTAAAGGCAAGGTCCAGTAAGCAACAAAAATCTGTAGAAAGTATTCCTAGTGAAAATACTTTATTTAGACTTTGTGATAAATGCATGGTGCACATTTATGGTAGCGTTACCCAGTAATGGGGATTCCCCTGCCAGTATTTCTGCTTAGTGACAACAGGTTAAGATGTTGTCACTCATGATGAGCGAAGAGTGTAGCAGGATTACATTTGTTTTTGTGAACTTAACCATTATTCTGATGAGCTCATGTAATTTTTCTGGTGCAACTGCTCTCATCAAAAATAGGCTAATTAGAAAGTCTTTAAATTGACTCTAGGTGACTTGGGCTAATTGCACTGGAGGCACACTCTGACAGATGCCAAAGTACTGAGCAAATAATTCTTGAAGAAGTCCATTTTGCTTACAACCTGAATCTGTAACAATTAAAGAATGTAAAGCCTATCGTCATTAACGGTAACACAGGGTTCAGACCACAAGTTGCCTTTTCTGTGATGAAAAAGTTAGCAAATGCACGTTTGGGACTTGCTTTTAAAAGTGAAGAATTGTTTAATAGCTTTAGTATAGCAATCATTGTTACTTCTTTGTTTTAACACAGACTACAGAAACATCTGTCATTTACAGTCAATTCCCTGAGGAAATATTTGATAAAACAATTAGTGTGGATGTTAGCATTTTGGCAAGCTTTAGGGCAACACTGACAGTAATTCTTTATAGGCAAATATTTAAGAAAATGTCAACGAGATTTATTAATTTGCAGAATTAGAGACTGAAATTCTGAAATGCAAGTCATATAGTCATTCCAAATACATCTTTTGTTTTGCTAGATATGGATGATATCACAGATTTCAACAGAATTCTTTTGCTGCTATAGTTAGAAGAGGCATTTACTGGATATAAGCACTCCGAAGGTGTGATTGTTGAGAAAAGGGGGGGGGGGGGGAAGGTACTTTGTCTAATAGTCTCAAGATTCTTATAGATTCTTATGGAAAAGGGAGACCAATACTTCTTCCTTATTTGAAAAACAAAACAAGCAAACAAACAAAAAACAAAAACAAACAACAACTACAAAAAACATCCCAAATCTGGCAGATGTTAAATATGGTGAGAGATGTGCTGGATGTTTACTGCAGCTCTTCAGATTCAGAAGCTACACTGAATCCCATCACTGAAATTTTCTGTTTTCTGACAGCTGTTTTTGCCATTTACTTTAAAAGCAGATGGGGAAAATGCAAAGAAGAGCTGTCAATTTTATTACCATGTATAATCAGCATCTGTGCGATACATCAGACTCATTGCACAGTTTACACTTCCTTCTCTGTAGTAAAAATTGTTTTGGAGTTTCTTGACAAGTTTCTTGCACACTTTTTGTAGATGCTGGAATTAAGGTTTTGCAATTAAGAGTTTAGATCACTAAAAGCTAAACTACTAACTAGAACAAATTTACTTATTCAAGAGTTTATGTCCTGATTATTTGATAATAAAATATATGGTTCATCTGCTGCTCCATATTCAAATTCATGTTTTCTAAAGTTATTTTATTTCATTATTACTAAATACTTTTTTTTTTTTTTAACATTTGCTAACCCATTAACAACACTGCTTAATGCATTTGGGTGCAGCATATCTTTGTGCAGCATAATTGTTGTGCCTTTCTCTACTGAGCAGGCTTAGTATTTTGTACCCTAAGTATATAAAATAAAATACAAATAATTTTGAGGGGAACTGGGTATTCTTCATTCCCAGCCCATTCTCTTTCTATGTGCAGAAATCTTTTATAGAAATGACTACTTAGGGTGGGAAACCAAGCTTTGAAAATAAGGTTTGAAAGTGTCAGTATGAATAGGCATGTTGTCTGTCTCCTTAAGTGCAGAAGTAGTAATCAGTAATGGTGTGCTCTGGGCTTCTAGCAGAGGACAGCATCCTCCTGGAAACCATCAAGGGATTTTACATGTCAGAAGGCTCAGGGGACCAGGTGGAAAGAATCTGTCTACTTGCTGGGGACCTGATTTGATTTGATTTGATTGGGTTTGAATTGCAGAAGCACCTTTGCTTCTTAAAATAGTAGGTGGTTGTATATTACGGTACCTACAGGGATGAGACATGGGAAAGACTTAGAAAAAGAAACATTCACAGTACTTTTCGTAAATAGGGGAGGTTAGGGAATAGCCTTCAAAAAAGGTTTCAACGGCTTCAGCTAGTTTGGCAGTGTTAAGAGACACTAAAACATGTATTGATGTAGGATTTCTTTGAAGTGAAGCAATAAAAGGAGCAAGAGACTTAATAGTAAGAACGTTAATTAGCATTTTGTGTGGCTATGGGCAGAGTAGAGTACTTCTTATACATGAGGCAGTGCATGCTTTGATGAAGCATGTACTTAACTGTCTTCCTCCATTATCTTATCTTATTTAATACACTGCTAAAATTGACCATGGCCTTTGAAAAAGAAACCACCAAGGTACTGTTTATGATACACAGATGATCATTTATAAAAAAAAAGAAAAAGAATGACTTCAGGAATGACTTTGAAAGGAGATATTATGCACAAAATTTAATACAATTTCCATGGAAAAATACTGATATTAGGTTTTTGTTCTTCTCTAATAATCGTACTTCTGACCATGTCATTTGTGAGCACTTAATAGCTGATTTTTTCAGTGATAACTACATCCCATTCTATTCCAGAATTAAATTTTCTTATTTAATATGAGGAATTAAAGAGAGTTTTTAATTACTATGAGTTTTATCAGTACAATGCAAATCTCCTTTAGATATTACTTTATCTGTGCTTTGTGACCCTAGAATATAGCTAATTAGATTTTCCTCTGGAATGGTGGATGCAAATTTGCACTCTGTGAAATTCAGCTGATTCTACAAAGATAAAGCAGATTAGAGGATAACAAAGCTTGAAAATGTGAATTTGATTTACTTTCTTTACAGACAAAGCAGGGTATAAAAGATTCTTCTGTATTTAGATAATCCTATTTTTTCTTTCTTATACTAATCTCATTTTCTAAAAATGTGATGTCTTTTATTGCATACACTTTGGCATGAGTTAATAAAAGACATACTTAGATGATCCTACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTGGCATGAGTTAATAAAAGACATACTTAGATGATCCTACTATAACAAATCCTTTATCCAGAAGAGCTGGTAAATCTATCCCAGTGCTATGCAGTCTGTCTGTTAGACGGTAGCTTTTTCACTAAAGGGAAATCTTAGGTAAGGTTGACATGGAGTTCATTTTACATACACACCAGTGAATTGGTAGTTCCCCTAGTTAGAATTGCTAGAAAGTTGGCTTTCAGAGATGTACTGTAGGAGGACAGGTTTGGGACCCATATAATTCATAGACCAATTGGACAGCTGTAGTCTGCTATTCCATCTTGTCATAACAAATGGCATTCATATATCCTGCAAGTTTACTTCAGTTTATAGAACTAATATATTGGTAAGTTAGAAAAGTAAATTGGAAAATACTTTATGTCGTTAACACTGGACTTTATCCTTCTCCAGTTACATGCCATATCATGTCCAGTTAAATAAGAGCTTTTTATGTTTAATGATAGATGCAAGCAGACAGGAGTCCTCCAGCAGTAGCTCATAAGTCTCTTCAGCATGAGCTAGTAAACAGTATTTATACATGAGGCCTGTGACAGACTGGTATGGGAACACTGCTACTGCAGTATGTCTTTCCTATACAAAGGCATTTTTTTCTCCAGTGTCTCTCTCACACCAGTTCCGGTCATCCTTTGTAATATGACCAAATTCTCTCCCTTTTTACCGTCCCCTTTCCATCACCCAATGTGTAGGTTTTCTGCCCTACACATTTCCCTATGCTGTGATTCTTTGGCAGCTTTTTCAGGCTGCACACCTGACAAATGTCTGCTGGGCATGCCCCAGCATTTGTGCAGTCAGTGGCTGCCAAATAGTGTGTGTAAGAGGAATGGATGTATAGCTGCCCTTCCCTTCATAGCTGGGTTACTTTGGTTTCTCAGCTCCCTCCCACTACTAATTTAAGGAAGGATTTATACATTTATTATCTGAAGCTTTTACCTCTCTTTGACCTAGCCTTGTGAGTAGAAAATGATCTAGATGAAAAGCATGCATAAGCTGTGTTTTCTGAGGAAACTCCGCCAAAAATGAAGCATAAGAATAGAAAACACTTGGCTTTGGCTGAGTTTGAGTTGACCTTTAACTCAAGCAATTTTTACTTATTCAGATGTTCGCTTTCTACATCTACTCAAAGGTACTGGGAAAGAGTGACCTTGTCCCCTTCCAGCCTCGTCAGTATTGCTGGTCTGACGCAAAATGTGCTTCATAGATCCAAAAGGCTCAACCAAGGAGAGGAAAGCATTTGAAAGAATATCCTGTTTATGGAAAAAGTTAACAGTCTCATACCATGGGATTCCCTGCGGTGTTTAAAATGTACCTGAAAACTGTAGCAAGGTGGCAACATTTTCCTACTTAAGGATTTTATAAAACATGACCTCTTTTTTAAACAGTGCTGATGAAGTGAGATTTTCTGTGTGTCAGGGATGTTAGTTTTTTTTGAGGCTTTCCTTTTTCTTGGCTTCTTTTTATGCCAGTCAAGAACAAATTCTGCTAAGGAAAAGCATGGACAAATTTAAGAAATTTTGAATATTATATAAATCAACGTCTCCATCAGAATAAAACCTCAACAGCAAAAAATCTTTCTTCTGTCCGGCTATACTGTGACCCCTGGAGAAACCTTACAAAAAGAAATAATTCTTGTAAGAATAGTTTCTTGTGAAGGCTTACTCAAAAAGAATAAATGAGATTGTTAGTTGCACACTTAGACTCACACATCTCTATATTGGAGCAAAAATGAGAAGGAGGAGTGTTAAAGGAACTAGGAGAAAAGGGGGGGGGAAGAAAACGGTAATATTCCTGCAACCAGACTAAAAAAGACATTTTGTCTTTAAATTCTAAATAGATGTCTGAATGTTTTCAAATAGTGCGCTAAATTCTACGCATTATGATTAATTCCTTGAAACAGATTTTTGGCGTCATCATTACATGCGTGGAGTTTGATACCTGTGTATAAAAGAGGGAAATGTCAATTTTATTAGATAGGCATAATATATATGTTTATATAACACTGTACATTCTAGAATACATAATTTCATTCTTTCATGTCTACATGATAGAATCCATTTGTGCAGCCATAACCATTAAATAGAGTGTCATGTGGAGATGTAGATTCTATTTTAAACATGTTTATTGCTGAACCTATTTTGACTTGTTGGTAAATGAATCATGGGTCTGCAGATTTCCCACGGGCAAAGAAAGCTCTCTACGTTCAAAAATTCTTGGAAAACAGCTTTCATCAGCCAGTTCATATTTGCAATATGGCAAGTTTGAGTCAGAGTTTCATTCATTTAAAGCAAATATAGTCAGTAACATAAATTACAATTTTAGATATGAAAAGTTGTATAAAGGAATTAGAAGTATAGCCATGTAATTCTAATATTATAACTTAAAATATGTTATGTTCTGTATCTAAAGAAATCATGTGTGTATGTTTAAAAATATGGCATTTGCCTTATTGCAGGTAGCAACATATGTTATTTGTTCTGTAGGAACATTCTTCTCTACTTTATTAGGTTTTACATATTTAAATGATTAACTCACAAAAGTCTTTAGAATTTTCTAAATAAACTTACTATAAAAATTGCTGTACGTGAATCATTAACTCGAATTCGAATATTTTAATGACACTTCCAGCTTAAATTTTACAAATAGTTTGTGTGCACCAGAAATAAATTTTCTTTATTTATAAGAAGAAGGTTGGACTTTAATTCATAACATTACATTCTATAGGATGAAAGAACAGACAAAAACTGATTACTTTTTTTTTAATGAATATTGAAATAAAATGACCTTGTATGTCGAGTTAAAAATTGTACTAAAAAGGAAAGCAAAATCAGACAACTTTTTTTGTTGAAATCAATCCCTTCTAGCTTGTTATAGCTTTAAGTTGTTTTTTGGCTTGGTATTTTTTTTTTATTTTTATTTTTGTGCTCATGCTATTGTTTTGCAG
Seq C2 exon
ACGGTTAGAACAAAATTCAATCAAAGTCATACCTCCTGGAGCTTTCTCACCCTATAAAAAGCTTCGAAGAAT
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000014419:ENSGALT00000037317:7
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0146213=LRRNT=WD(100=59.6),PF138551=LRR_8=PU(8.2=10.6)
A:
NA
C2:
PF138551=LRR_8=FE(39.3=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]