GgaINT0096711 @ galGal3
Intron Retention
Gene
ENSGALG00000012799 | RREB1
Description
NA
Coordinates
chr2:65838522-65856890:-
Coord C1 exon
chr2:65854151-65856890
Coord A exon
chr2:65839269-65854150
Coord C2 exon
chr2:65838522-65839268
Length
14882 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGA
5' ss Score
10.77
3' ss Seq
TTCTCTCTGTTTGCTTGCAGACA
3' ss Score
10.91
Exon sequences
Seq C1 exon
GTCTGGTGTGAAACAAATTTGCGAAGGTGCATCAGTGAATTCCATCGGTTTATTTGCGAGACGTGTAACAAGGCATTCCCCATGCTTTTGGCACTCAAACTGCACACAGAAACTCACGTGATGGATCAGGGAAGAGACAAGCACAAGCTACAGTCCACATCCCTACCCAGTGAGAACCCAGACCAGAAAGCCTTCATGGCATCCTTGGGCCTACAGTACACCAAAGACATCAAACCTGTCAAGCAGGAGGACGATACACAAGATGAGGTCCAAGAAATGCGGCTCAGAGCACTGAAGAGTAACCTACCTCAGGAACCCGGCAGCACTGGCCTGCTTAGCCTCTCTCCTCTGGAAGCTGCCACTATGGGGGGGCCATTTTCAGTCCTCCCACCTACAAAGGAGAACATAAAGCTCCTCTCGCTGCAGCCTTTCCAGAAGGGTTTTATCATCCAGCCTGACAGCAGTATTGTGGTAAAACCCATCTCCAATGAATCTGCAATTGAGTTGGCAGACATTCAGCAGATCTTGAAGATGGCTTCTTCCGCTCCTCCTCAAATCAGTCTTCCTCCACTTTCTAAGGCACCTTCTGTCCCTGTGCAGTCCATTTTCAAGCATATGCCACCACTGAAGCCAAAGCCTTTGGTAACGCCCCGAACAGTTGTCGCAACTTCTACACCTCCTCCTCTTATCAGTGCCCAGCAAGCCTCCCCCGGCTGCATTAGCCCAAGCCTCCCACCACCTCCTCTGAGGCTGATCAAGAACTCGGTGGAGACCTCCTCCAACTCTCACCTCTCCCAGCCAGGAGCCAAATCAAGTCCTTCCTCACAGTTGCTCCTCCAGCCCAAAGTAGAGCCTTTAACTCAGCACGAGATGAAGACACAACTGGAGCAGGACAGCATTATTGAAGCTCTCCTGCCTCTGAACATGGAAGCCAAGATCAAGCAAGAGGTGACAGAAGGGGACCTCAAAGCCATCATTGCAGGGGCAGCAAACAAGAAAGCCCCAACAATGAGGAAAGTCTTGTACCCCTGTCGTTTCTGTGACCAGGTGTTTGCTTTCTCTGGTGTCCTGAGAGCTCATATCCGTTCTCACTTGGGTATTTCCCCATACCAGTGCAACATCTGTGACTACATTGCAGCTGACAAGGCGGCGCTGATCCGGCACCTGCGGACACACAGTGGGGAGAGGCCTTATATTTGTAAAATCTGCCACTACCCTTTCACAGTTAAAGCCAACTGCGAGAGGCATCTGCGAAAGAAGCACCTCAAAGTGACCAGAAAGGATATAGAGAAGAACATTGAGTATGTCACCAGCAATGCCGCAGAGATGGTGGATGCCTTCTGTTCTCCAGACACTGTGTGCAAGTTGTGCGGCGAGGATCTGAAGCATTACCGGGCCCTCCGCATCCACATGAGGACTCACAGTGGCTGCCAGAAGAAGAAGCCATTTGAGTGCAAGGAGTGTGGCACAGCCTTTTCAGCCAAGAGGAACTGCATTCACCATATCCTGAAGCAGCATTTGCATGTGCAGGAAAGGGAGATTGAAAATTACATCCTGGTGGTGGACTGCAGTGCTCAGGAGAGCCACACAGATGCTCCTTTATTGGAGGACAGCACTTACATGGACTGCAAGCCCATCACTCCTTTCCTAGAGCCACAAAACGGCTTCTTGCTTGGGACGTCATCTCATGTTCCCATCAAACTTGAACCTATGGGCAACTTCCCGATGGATTTTGATGAGCCGTTGGATTTCTCTCAGAAGAGCAAAAACCTGAGTGCTGTGCAAGTGAAGCAGGAGAACCTGCTTGTCTCTTCTCCCTTGTCCTTCTACGACTGTTCCATGGAGCCCATTGACCTGTCCATCCCCAAAGTCCTGAAGAGAGATAATGATATCCCAGGTGAGGCCAGGAATCAAGAGCTGGCTTCTTCTGTGATCACTGATAATGCCTATAACTGTCAGCAGTGTCCTCTGGGCTTTGGTGCCAATGGGAACTCAGAGAAAAACAGGGCTGTCGGACATCCCCAGCCACTGAAGGGTTCGTTGCATTTGACTGTCCCAATCATTTCCCCAGCTCTCCTTGGCAATTCTGCCTTGCTGAGACCCTTGAGGCCTAAACCACCACCGCAACCTCTCTTGCCAAAGCCTCCAGTAACTAAAGAGCTGCCACCGCTGGCTTCCATTGCACAGATCATTTCATCTGTGTCGTCTGCTCCTGCTTTGCTGAAAACGGAGGCTGCAGATGCCAGTCCCAAGGCAGCGAGCAGCTCCACTGGGTGTGACAAATCAGGGAATGCCAAAGCAAAAATGACAATCGTGACCGCCATTCAGAGAGACTCCAGCCTTCCCAGTGACCTGACTCAGGCCTCTGATCCCGAGCCGTCTCCCATTGCTGACACTGGGTTGACTAAGAAGAGAGGTAGAAAGAAAGGAACAAAAAACAAGCCTAAACTGAGCAGTGGTGTGGATCTGGAGTCAAGCGGGGAGTTTGCCAGCATAGAGAAGATGCTGGCTACCACAGACACTAATAAATTTAGCCCGTTTCTACAGTCCACTGACAATTTCAAGGAAGAAAGCGGCCAAAATGGAACAAGTGAGGATGAAAAGGAAACTCCTGAAGATAAGCTGCTGAGAGGGAAGAGGAACACTTACTCAGACTGCCCGCAAAAAATAACCTGTCCTTACTGTCCTCGAGTCTTTTCGTGGGCAAGTTCCCTACAGCGGCACATGCTCACTCACACAG
Seq A exon
GTAAGAGTGCCTCATCCTTCAAGTGGATTGTAGTGCCCGAGGATTTTCCTAGCTGAAGGCAGGGTCTCCTCATGCAGGAGCCTTCCTTTCTTGTCTTCCCTCTGATGTCCGAATCATATTCTTTTTTGTTTTTCTTTGCAAAGCCTCAGCTGTTGCTGTTGCATTGTGGTGGTGTTAAATTTTTTAGTAATGGAGTAATTTCTGTGGCTTTGAGTATCAAGAGGGCAAACTAAGCTGCTAAAACCCATTTGACTTCGGTGGCGTAACTTAGCATACATGGAAAAAGAATTTGGTTTCAGGTTTTCTATTATTTCTGTCTCATCTAGACAGTTAACATGTGTTGAATATTTCATTGTGCCTTACATGGTTTGTTTGGATGCTTCCAGGGACTGTTTGTCAACTTCAGTAATGATAAAAATATGCCATAACAATGAGAGCAAATAAGTGTAAAACTGTGTCAGTGAAAGAAAATAATGTAGCATTTAGCATTCTTTTTTCTTGTGATGGCTTTTATTTGACAGAAGGAAGGAGGATGCAAGAAATACCATCCCGAACATTACGCAGTAGTAGTTTCCCTCTAGGAGATGTTTCTTCTTAGTGTTAGACAACTAAAGGTGGGCTTATACCCCAAGGCATGAAGTTATATCGTGCCACTGTGCAAGTAACCTCAAAGCTGGGGTTAACCAAAGGAGGAACTGGGGGGCGAGATTTACTATAGGTTTGGGGTTCTTCTTCATTCTTCATTGTGAAGGACAGACTTCATTGAATGCTGTGTCAATCTGAAGCTAACTCCTTTTTTCACTCGTGCTGTAATAATTAGTAGGTTCTTACCCTGCTTAGAGTTGGAAAAGAAGAAACTCTACTTCTTTTGCTCTCTTTTAAGTCAGTGACAATTGTTGATAACATTCTCCTCATTATGCAATCTCAACTCCTGATAGAAAGAGTAAAAGTTAGAAAATTAGTAAGAAATGTCTGGGAATTGAGTACAGCCTCATAAGAGAGAAGAGATTTATTTATTTATGTAGAAAGAATGAAGCGTTCATGAAGCAAAAGATCCATTTCTAAAGGGGAACCCCGAAGAGGCAAAGAGTTAGCTAAGAGGTTTAAAGGGAATCTGAGTTGCGGAGCAGTCCCTCTTACAGTTTGCTTTGGGTGACGTGAGGATGTAACTTGAAGGTATCCGTGCAACAGTGAGGCTATTGTTTTCTGGCATGCACAGACCAAATTCTATCATCTTATTAAGCATACAGTTTGCTTTCAGCGGTGAAGGAGAGCTCTTTATTCGTATCAGTTGTTTCTTAACACCCTGCCCTCCAAAAATAATATATAGTTACTGAGGAACTTTTCATGAGACAGAAAACAATAAAGAGAGGCTTTGCCCAGACTGAGGAGGTTGACCTGCTTATTGATGGCGGACTTCCAAGGTAGCAGCACTGATGTAAACCCTTAATGTAGACAGGAAAATGCACTTCTGGTAAAACCTGTCTCCCCTGCCATCCCTGGGCTTGGAAGACGACACCATCCTTTAGAAGGCCTGTGCTGCTGTCCCCACGGGCAGAACAAACCACTGCAGTAGGAACTAGGCTCAGTGCAGGTCCAGGACATGGTGATGCCACAGTACTGGCACCGATCAGATTCAGTCTGGTGCACTCTGGCATTGCACATACTGAGAGCTCTTTCGAATCATGATCAGAGCAGTGTTGAGGGAGGCTTGGTGCTGGGGAATCACGCTTCTTCAGGTTTGGGCCTTGGGTCACCTCCTTTCAGGTGACACTAGTTCTCTGTTTCTGAACTGAGAGTCCACAGCAGCTCCCCTCTGACAGCAATGTACATACAGCTTACAGGAGGGGAAAGGGAAAGGTAAGATGGGAAGACAGAGGAGGTTTAGGCTAAGGAAGGTGGTTCCAAGGCAAGTGCTAAGATGCACTGAGATGTGCTAAGATGCTTTGGGCTTGAGTGGGCCCTGTGTTTTTGTGTTGGCTCTCAGGTGCTGGTGGCACAAGCAGAATTTGGCAGCTGTGTGATGTAGCAGTTTGCTGGGTTTGTGTCCTGCACAGGTTTCTGTTGGAGACATCTACAGTGTTCTAGTGCAATGCACTTCTGTGCCCACCTATCACACAGGCAGTGACTTGTTAGTTAGCTTTGCTTTTTAGAAGGAGTCTAGGAACGATTTTGATCTCTGATCTTACTGTAAAGAGAAAAAGGGAACTTTATTGTTTGAACTTGGTGGCTGCTCCCTGACTCGGAGAAAGAAGAGGCCCAGATAAGCTCATGTGAGTGAGAAGGGTGTTGTGCTCCCCAGCTGTGTATGTTGGGCATCCGGTCTGTAGTGAATTGGGGAATGGCTTGGGTTAGAAAGGACCTCCAAGATCATCTCGTTCCAGCTCCCCTGCCATGGGCAGAGTTGCCAACCACTAAATCAGATGCTAGATCAGGCTGCCCAGGGAAGATTTCATAGAATCACAACGGTGAAGCTGGCCATGCTCCTAGGTCACTGTGGTACACTGCTGTCAGAAGAGTTGTGCAGTCGCTTGAGCAAAGTGGTGCAACTAGCTTGAGCGAAGTGGTGCAACTCCACTTGTAGTACGGAAATTGCTCATGGGAAAATATGTCTGACTGAGGAAAATGTACTTCATTTTGAGCATTTAAGTAGTATACATACTACCAGTTTTAAACCTCTGTCCATTTCCAGTCATGAAAAGATTTTTGCAAGCATGTCTTTCATGTTCAGTAGAATTTCAACATGAAGAACTTCTTCCGTGTGGTGTCAAGATTATTTTTGCTTTTTGTGAAAGGGCACAAATGTGTGTGCTACGAGTATCCCATATCCTTCACACAGCCTAAAGCCTCTGATAAAAGCCTTCGTGCTGCTCAGTCTTGCCTCAACACCGCTATGTGTTTTTTACTTCAGAAGCATTTCCATGGGAAGTATACATCTTCTTCATTGGTTTTTATTGTAATGCAGAGCTCACAAGTGGGGCTCTGGGAATTTGGCACAGCTTGTTTTTGAATAGTGTTTAGCACTGTACCTGTGTTTTGTTTGAACATGCTTGAATGCTTGCTTTTCATACTTTCTTTCTCTTGATGTTGTCTTATTTAATATTCTCTTCTATGTTCAACTCAGTTTACCTTTCTTTCTCGCTCTTCTCTCCAGCTCTTGACTTTTTTCATTCTCAGAGCAGCAAAGATGTGCCCTGCAGATGATGCAGTTAATTTTTCTCCTTTTATGGTACATGAATCAAACTGGGTTCTATACAAAATGAAATAAATGGTGTGTGGCCATTAGGTACAGATAACCTAGATGTGTTTGCAGAGAATCACTTGAGGGTGTTCTCAGAGCGATACTACCAGATCATATTTGGCCCAGCATTGCCGTTTGTGAAAGGTGAGATGCAGTGGCAATGGTGGTTCTTTTTTGGTTTTGTTTTTTTTCTGTATGTGTGATTTTCTTTTGGTTTTGGTTAGTTGGGTTTTTTGTGTGTGTGTTTTATGGGTGTTTTTTTTTTTTTTTTGCAGATTGCAAGCTTCTGCTTGCCAAGCATTCAGAATATCATGGAAATAGAGTGGACGGGAAGATATCTATAAACAACAGGAATTAATTAGTTAGTAAAATACAGTTGTGCCTAACCTGTGAACCTGGGTGTTTCCTATTGATGGGTGGATATAAGTTGTAAAAAAAGAGTTGGAAGGGGTTTTATTCCTTGCCTGTATGACTTGAGTCAGAGTGGAGCTTTAGACATCTTCACTTCGCAGAGCTGGTCCTCACCATGGCAGTAGTGCACTTCAACTGCTACAACAATGGCAGGAGATACATTAATTAAGCAATGCTCTTCTGATGTACTATGATTGCTTAGATGACCTTTTATTTCAAAAGAGAGTCCGTTCAAATGACTGGCTTCCATGAGGTGTCCAGCCTCAACTAGTCTCGCTGTGCTAACTGAGTTCTGCAGTCAGTTCTGAGTCAATACACAGCTGCAGACGTATTTTAACCCAAGCCACGATCATTCATTTGGAAATAAATAAAGAAATAAATAAAATCATGTTTGAAATATAACTGCTTAGGTGACCCTCCAGTCAGTAAGCGGATTTTATCAGAAGAGCAGGTGCCTCTGAGGGACAGTATGGGAAGCAAGGAATACTGCTCGTTTGAATGATCTTTATTGTGCCTTTAAAAAGTGGCACTTGTGTAAAGCAGTCCAGTTTCTATTTGGGAATAGGACTGTAAGCTGGGGTCGGGGAATTGGAGTTCAGGCAGTAAGCAGGATTTTTGTTTGAGTTTTGAGACCTCCAGGTAGGATGTTTGTGTGGAAAGAAGATCTTATCTGTTGTAGATACTGGTCTGTATGACAAATATTTGGTTGATAGAAAAGCTTTAAAATCTGAAGATATGAGAAAATTGTGACCTGAGATGCAGGTTGAGTTTCAAGCAATTAATCCCCAGCTAATCCTGTCATTGCATGCTTGAAAAGAAATGTGAAAAGAATTAGGCTATCGTGAAGCAGAAAGATTTCTGCTGAACTTTGAAGTTCTGTTTTGTATTTGGCTTCTTTCACAACGCAAATAAAAGTGCAGAAAGTGGTATTTGTAGCCATAAATTTCTGGTTGATTTAGCAGGCATCTAAAAGAAAAAGTGAGTAACTTGAAAGCCTACAAAAATCAGTGCCTTGATGCTTCTAAAATGAGACAGCGAAGTTGTGTCTGTGATGCTTCTAAAATGACACAGTTGACGCAGTGAAGAGAAAGAAATAACTGAAGTGAAATGTCTGCAAGATGTGGGGAGTCCCTCGTTCAGGTTGAAGAGTTAATTAGAACCAAACCAACTTGTGGCAGTTGGAAGTGAGGGAAACACCCACAGTGTCGTATCAAAAAGAGGCCGTAATTGGTCTGGGGGGTTGTGTGTGTGTGTGTGTTCAGGGGGTTTGGATGTGAGGGGGAAGATGTGACAGGAGCTGGTCTCCTTTGACTTGTAACCATCCTCACAATCTCCTCCTCCATCACAGAGACATCTTGTGGAACGGCTTTCCTCATTCCACTGCATGAGCCTGGCTTTTCTTCCTGCTCTTCCTGTACGTGGCCTCTCCCCTTCTCTTAGTCATTTAAATGAATTACAGAGATGAAAAACTTTCTCCTGCAGGGAATTGAGTGGACCTTACATAGGACTTTATATGACTGAAGTCTATGGATCAAGTGCCCAGTGGCTCTGATGGAAGTTTCATCAAATTCAAACAGACATCTCAAGATAATGTCTTGTTGAGGAGCTGGCAGCGAGGATGTTGTAGCAAGTCACCTTTGACTTGGGAAATTAGGGTTCTTTTCCACTGAAACAGATTTGGTTCTGACAGGCTGGTCTCAGAGATTACTGACAAGGTGACTTGAGAGTGAAAGCGGGGGGGTGAAAGTGATAAAGGAGGAAAAACAAACAAACAAAAAACAACAGCCAGCCATACCAAACCTAATAGAATTTGCACAGATTCTGCCATCTGATCCCTGGGGAGAAATGGGTTTATCCCTCATCCTGAGGAAAGGGATGCTGGATCTCACAGCAGCACAGGCACTTTTCAAATAGAAAGATCAAATTGTGTTAGTTGGGCTGAGCGGTGCAGAAAAACAAAGCATAAAGGCGAGAGAAATAGAATCACAGAATATCCCAAGTTGGAAGGGACCCATTAGGATCATCAAGTCCAACTCCTGATGCCCTGCTGTGTTAGAGCAGTGGTTCATGCAGCTAAATGCTCTGTTTCCAGTGGTATCTGTAGGATCTGCTGTTTAGGGTGAGCTTGTGGGCCTGGCCACTTCCTGGAGTCTGTTCCTCTTACACTCTGCCAGCATCCACCACTGCTGCATTAGGGCTGCACGTTAGAGGGCATGTCGCTGCCTGCTCCGTTTAGAACCTGATCATGGACCAGCTGTCTCTCGGTGTCTTCAGTTGCTTTCTGAACCTGCTGATGCTGTCTGCCTCCAACCTCACGTGGCGTCAAGCTCCAGAAGTTCACTACCTGCTGTGTAAAGAAATATTTTTTAAATCCGTTTTAAGCTGATCCCCTGCTAGTTTCAGAGAGCCTCCCTTCATTCCAGCATTGCAGGATTCGGTGAATTGTAGTTCTGTGTTTGCTCTCTCTGCTCACAGACTTCAATCATAATCACCCCCTCTCCCCCAAAAATGAGGGTTCTCGGCCTTTCTGGTGTCATCCCATTGCTTGGATTAGGTTCACTTTGTGTCTTCTGCAGCCCAGCTATATCCTTCCTGCAGCGCTGAGGCCACAACTGCACGCACAACCTGTAATGAGGGCACACCAGGCCTGTGCACAACAGCAAAGGGACACCCTTTGTTTTGCTCTCAACACCCTTGCTTGAGGTACGCAGCATTTCTTGGCTTTATATTGGCTGCTGATGCAGGGCAAGGCAGTGGTCCTGGAGAGCTGTATGCAATGGCTCCTCTTTCCTGAGCGCCAGGACCACTTTCAGCATCTTGAAGGTTTGCTTTAGATGATTTTTTTCCAGTGTTTTTTTTTTTACCTTAAGTTTGTCTGCACTGATGCTCACCTGTCATCTTCTTGCCCACTCGATTTTGAGAGTTTTTCAGCAAAGGAAATTGTTTGTCAGATCACACGAGGCTTTGCTGTAGGCACGTGAGTGGCATTTAGCAAAAAGGGGCGAAATGGCATCAAACTGTGGGTGACTGCAGTAGTTAAGTGTTCGCCTTTGCTGACCAAATGGGATAGATACAGGAAGGAAGCTCAGTGGATTGGTACGTTTCCCTTGCCCGAGAAGCTCTTGTACAAAAGAGATACCTTCAGGAGAGACAGGGCAGCTCTGTGTCACTGAGTAGGTGACATGGAAGAGCTATTGAAACAGCAAATGTAAAAGCAGCGAGATCTCTGTTTGGAAATGTCTGCTGTCTCCACAGCCTCTCATCCTTTCTTTCCCTTGTAATCGGCAGGTTGTGTTGCAGTGATTCAGGTGCAGTCACGCAGGTCTCAGTACTAGTCTGGCAGTAAAATCTGCCATGCTAGAGACATGTTGCAACGTGATTTGCCCTCGCCTGCCATGAAGGACGAAGATGTCTTGTTACCACGTTAGCAGCCCGTAACTGTGCTGGGCTCTAGCATGTTACCTGGGGTGTCACGTGAGCTGGTTCGGCCTTTGCCGGCAACAGATGGTTGCAGCATGAGAGAAGACTCATGTTATAACATGATCCCCTAGCAGAACAAAAGTCTGCAGAAAGGGCTCTGGAAGTGCTCACCTCTGTGGTCTTTGCAGCAGAACGAAGCGAAAATGCCCTAATGGGATCTGCTAGAAACTGTAGTCAGAGGGAAGCTAAGGCAGCTCAGCTGATTGACGGGGTGAGGAGGAGGAAGGGGTTTCTAAAGCCACTCAGACAAGTGTGAGCATGACACATAGGATGTGCAGGACACTGATGGAAGGTAAACGTTGTTCTTAGCTCTTGTGCAGCCAGTGCTGGGCTGGTCAGAGTGGTTTGACCTGCCCCTGGCAGACAGAGCCTTGGGCCACGGTTGGATAACACAAAGCACGTCTCAGCCATACTGGCTCAACCTGTTCCCAGCTGTTCATCCCCACGTCTGTAACTGACCTAGCTGTCCAAAAAAATGAAAAGGGCAAGGGGAGGGACCGGCAGTCCTAAGATCAGTTCTCAGATCCAGCTCATGGTATGACCCTGAAAGAGTGTGTTGATGCAGCAGGGTGATGGAGCTGGCAGCATCTCCTGGGAGAACTGGATGGATGCTGCTGAAATTGGCCTTGCCATCAAACGCTTTTTTTTTCTTCAGACAGCAGCTTCAGTAAGCAAGGAAGGCGTCCAGCTCCTGTGCTGGTAGCATTACCGTGAGCACTTCATAGCATGGCTTAATGTTCTTAACAAGCTTCGCCAGCTGGTGTTTAATCACAGGCCAGAATCATTCAGCATCTTGGGACATGTGGTCTCACTCCATTGCGCAAGAAAAATGGATTTCAAAATCAGTGGAAGCAAATTATAATTTGAAACTGTGGCTCAGTTGAAAAGGGGGGCATTTCTCATCTTGTGCTGGCTTTAAAAGGTGGGCAAGTGGTGTGGTTGGGGCTTACAGGAGAAGCCTTTCAGTAGCTGTTATCTGCAAGCGGGTCATCGTCCGGATTGCCGAGCTGCGTGCTGAAAGGGAGAGACTTGGGTGGTGTTTGGTCAGCTCTAAATGAAGCAGAGAGGAAAGCTTTAAGATGAGGTGTAAGACAGGAAGCGCAATTCAATAGAGTGTCACCGGGAACAGGTTTATAGAGGGTTTCTTTTGGTCTGGTTTTAAAACAAAACAAAAAACAGGATGGCGGTTTTGAATAGGAGTCGAAGATGGGGAATCTGTGTGAGTGATGGAGTTTGTGTGTGTCCTTGCTTCGTGAAACAGAAGGGAGCAGCCTAACAGCAGGGCTCGAAACATCTCATGCAGGAGGGGCAGCTCGTGGGGCTCAGAGCAAGGCAGGCTGCTGCAGCCGCCCTGTGGAGCAACTCAATGAATCGTCCACTTTCATCACGTTAAAGCAGCCCTGCCCTCGCTTCCGTAGGGCTTTCTGAAGGCTCCTTTCTTGCAACCAAATGCAACGAGAGATGTTGGGATGGGAATGGGGTAAGGGATTACCTGTTACACAGTACATAAAGATACTTTCCTAAGAGAAGGTCCTTTTCTTAGAGGGGCCTGCTCCTGATTTGAGAGGGTCAAAGACAACTATTCTGTGTTAACTAGGCAAATATTTACAAAGTACGCTCGACAGTGAATTTTCTGATTAGTGTTTAAGCAGAATTCATCTTTGCTCTAGAAATCTGCCACTCTGTGATCCCTCCAGAAATCATGTGAGCCCTGGTTGTAGTGGAGGACTTGTTTTTCCAAACTGCCCTAGCTGTCTGTACCTCTGAACTACATTTGTCGTTATTTCCTAGAGGACAAAGGGCTTGAAACTGCAGTTTCAGTGTCAGGCAAAGTTTAACAGCCACTCCAGAGCCATAGCTTATGGCAAGGCAAGAGCTGCTTGGCAAAGGAGTGAGTGGCAAATGGAGAGGAGACACTGAAGATCTGAAGTTGGTCTGAATGGCAGAGCAGTTGTGTTGAAGATACTGAGAGGATGATGTATAACTCACTTGAACATATTGCCAGCTCTGCATGAAACCCTCTTTCTGATAGACAGGAGAATTCACTGTGAACTCAAAGTCTCTGGGCTTTTTCCCCCCAGTTCAGTGCAGATTTCCACTTGCTAGATGCAGTCAAAACTAGTCCTGAGTGCCTTTGTTTGTGTTGGTGACTTGAACTGCTCACTTGAAGGTCTTGGAGGGGACCATAGGTTGTGTCAAAGGCAAACAGCGTGGTGCTGTATATCTCTTCTCCAGGGTTTTAGTTGTAGTTTTAACCGGCTGCTTTTCCAGATCCTTTCCTTTTCCCCCACGTGTACACAAATTCCCTACACTTCTTTAAAAATTCATCTGTCTTTTAATGTTCTTATTTCATGAGTCATGCACATAGCAGCTGAAGCTCCCTCAACCGTGGGCTGTTTAAGTATTTAACCTTGCGTGTGGTGTAATGTGAGGTAGTAGAGGTGGCAAAATGTGTGTTTACGATAAAAATGGACAGAGGTAGCCCCCATGTTTTTGCGAGTTGACTCCACAGGTTGAAAAGCTGTTCTCCAAGTTGTAGATGTAAGTAGGAGCAGCGTTGCCTGAGCAGGCCGTTAAAAGTGCCAAACTTACTGGGTTGCTTCCACCTAGTGGTGGCTGCGTCTCTTGTAAAACAAGAAAAAAAAAATATCTGAGGTTATTTCAGTTAACGTAGGGAAAATAGTAAGTTGTCAGCTCATCTGACTGGTAATGCCAACTGCTTGTCCAACATTTACTTTCAGTGCTCTGTCTGCTCCGCTTTTGAGCATCATTTATGTGATGGGTTTTCTGACACTTCTGTGGGGATGTCAGGAATGTCTGGCAATAAACACTTGCTTTAAAGTCACAAAATTGTTTCCACTGCAACACCCTGTTTTATCTCGTAACACCTCAGCATCTCCAGCTACACTCTATTCTGCCTTACTTCCAGGGGAAAGACATACACAGGAAACCAGAATCAAACCAGCAGCCTCCCCGCCTTGATCTGTATCTGCTCTTTTATCTGAAACTTTCCATGTTCAGTGTCTCTCTGGACAATTGTGTTTGTGTATACAGGAAAGCAGTTTACTTCTCATTCTCTTTCTTGCTACCTATAAAAGATGAAGTGGACTGTTCTGACTGGGCCGACTGAAACCTTCAGCTTGAATTGTAAACAGACTTCATCAAAACGCTCTTCTTGCAGCAGTTTGAAGGAAAAAAAGGTGATCTTGGCTACAAGTATATAGTGGTTTCTTTCATGCAGGAGGAAAAGTTTTTGCATTCTCAGATGGAGACCTTGAGGTTTTGCTTATGAATATATCTCCTGAGAAGTTTGTTTCTTTCCCAGGCATTGAAGAGGTAGCAGCTGAGCTGCAGCTTCTCCTTGCCTTCCTCTTCAGGGCCTCACTTCCCTGCCGATCCCCTCTCTCCCTTACATCTCCCACGGTCTTTAGCTTTGTGTCAGAGCTGACTCCCTCAAACCTTGACAGCTTTGTGTCCTCACCTCAGAGGAGCATCTCAAACTGTGCTCCTCTGGGACAAGGCCACATGCTCAGCTCCCAGCCATCTCCTAAAACTGAGGCTTAGGAGTACCTAAACTGAGATGCGGGTGCTGAGAAAGTGGCCAGTGGGCAGGGGCCTCGGTAAGGGTAGTTCTGCTCTTGTCCTCTCCAGTTTTATTTGTGGGATAACAAGCAGACTGGAGAGCATTTTCAGCATTAGTAAGAGACAGAAACAGCAGGCCTTTCCCTGGTACCATGCCTTCCTCGCGACCTCAAGTGCATGTGACTATACAACAGGATAAAGAAAATGCAGTCGTGGAGCCACTGATTCTGGAAACAGGACTGACCCATTTGAGAGGAGCTCAGGCCCTTTGGAGACGTTTGCTCAGATCTGAAGGCTTGTTTAGAATCCTTCCCCATGTCATACAGCGTTCTATGTGGCCAGCAATGTTTTCTACAAAGAGGCCTGTAAACAAGCTAAAAGCAGCATTGTCGGCCTTGCAGGAGAAACCCCACACCAGGCACCAGTGAGGCCATCTTCACGACAGTCCTCTTTCCCACACGCCTCCCAGCACTGCTCTTCCAGTTTGGCCACAGCAGAGCAGGGCTGGTTCTCACCCATCCCCAGAGTCAGGTTTTGTGCAAAGCAGGTTGCTTTTTCACCAGCTGTGAAACCAACTGCACAGGTTGGGGGTAACCACAGAGTAGCTCGACTAGTCTGGAGCTGCCATTTTGTGATATGCATGTAGTTTCATAAGGAGGCTGCGAAGCTCTTCCTTGACTAGAAAGGCAGCAGGTCTCATCAGCGCAGGTGGGAAGGAAGAGCAATCACCCAAGCCCACACCTTAGGATATTCCTGGTCAAGTCCATAACTGAATTTTGGAAGTGTTCATTCTATGGTGGTGAGCTGGTTTTGGAAGAGGAAGCGTGTGTATCCATGCTGCTGGTGTCTGAGGTCTTTTTCCTTCCTGAATGCTGGTGGTTAAGGTTCATATTCTTTTTCTTGATGTCATCCTCACCCATTAGCCTGCGCTGGTAAGGCAGCACCACCTACATCACCTGTCCTGCAGAGCCAGTCTCTCTTCCACACGAAAATGTAATTGTGAGCCAGCAACACAAGGAGGGAACTACAGGTGGGAGGGGCACAGGGGAGAAAAAAGGAGACAGAGTTTGAGTACAATTAATTGAACAATTTCCTCCTAAAAGAAAAAAAGTAATACATTGTGCAAATGCTTAAAGCACGGCAAGGAAAAGTTAGGGGGGGGAAAGGGAAAAGTAGAAAATGATGTGCAATATACAACACGTTGAACTTAAAAGTTGAGGAGGCTTTCGTGTTTGAGGTTTTTAAAACAAGATATTCAGTTTCTGGCCTTCTCTGGTTCTTACTCCCCTCCTGGAATGCTTCTGGCTCATATTCCCCTCCTGAACATTGCTCCCGATAGTTCCTGTCTGAAGAGTCACCTTGCTCTGCGTCTGCTGCTTGTGTTTGGGCAGCAAGGAGTTAGAGTGTGGCTCTTGATGTGACAGAAGTGAAGCTCCTTCCATCCTGGACTCTTCATGCTCATACTTCTCTCCATCTTAAGATACTTTCCTGCTCTCTTCCCCAGTAAAGCCCTGCTTCTCATTTTGCTTTCAGTTTTCCTTTGGCCTTACACACAGTTCCTCACAGGAGTGTTTCCTGGCCTCACCCATGGAGCTCATCTTGCTGAGGGTGTGAGCACCAGCATTGGGGTGCAGCAGCCACTCAGGTGCTTCCCATGGACATTGTTTGAGGATCTCTGTACCTCAGTCCACTTTGCCAATTTAGTCTTTTCATCCGTCGTTCACAAATACCTGCTGTTGATGGCAGCAACCAAGGGCTGCTGAGAAGGAAAATCCTCTGTGGTTTCCCTTCCCTTCGCCCTTGAAGCAGTGATTGTGGGGTCACTTCGTTCCCATGCACCCCAAATCCACATTTCACTCCAAATCTGCGCTGAGGTGAAAAAGACCGTGCTTGCTGTGTGGTGTGTGAATGTTAGCACCACTAAGGCTGGAGCAAGAGTGGGTGGCCATGGTCAAGGACAAGAACCCTTTCAGCAGCAGTGTGGAGTCACATCTCTCGTCATTAATCCTTCCTTTCATCTAAACTCTTGGGCTAAGCTGAAGCACTTCCAGTGAGACACAGATGTGCTGTTCCAGTCCCCAGAATGCCATGTGTGGAAGAAGGCAGCAGGCCAGGAACCCACAGGAGTGCTTCCTCTGTTTTGTTTTGTTTTGTTTTTTAAAACATTTCCCCTGTATGGATGTGGCCTGGGTTTGGGTTCTGGTTTTGCTGCCTTGCCTGCAACATCAGCCACGAGGCCCTGCTGCCTGCACGTAATTGAGAATGCTTTCTGTGCCCCCTGCTTCTCATCCATGGTTGTCTCACGTTTCTCTGAGTTGTAAAGCAGTGTGGCTCCTTAATTTACTCTTTGAGATTTCAGCTGGGTTTTTAGAAATGGCCTCCTGATGTTTGTAATAACTTCGTTTGAATTTTTTACCTCAGTTTATCCAGGCAAGAAGCAATGAGTCAAAACATAGAATTCAAATGCAAATGTGTAGGGCACTTGTAGGTGACCTTCTTTTTCCAGATGCCCACATTCTCAAATTCTCCAGCATTATACACCGATTAGGGCATAGTTGCATGTTTTAATGGTTAGATAATGAAATGAGCAGTGAATTTTGTTGAAAGCTTCTGTGCAAACCAGTCAATATAAACTGATCTGTTTTGATTAAAAGATGAGATTATTGTTTTTTTTTGACAGTTCACTCTTTCCCTCCATTCCACCCCACTCAGACTTCCCCAAAAAAAGGAAGTGTCAAGGATTATGCTGCATTAAGTAATAGTTCACAATCTGGAAATGCTGCTCAGCCTTGACATCTGTTTAATGGCCATTGATTATCACTTGCAGTTGGACTGGATGATCTTGGAGGTCTTTTTCAACCTTGATGATTGTGTGGTGATTCTAAGAAAATGAGGTCGATGCAAGGTACACAGCAAGGCTACGTTTGAACTTCAGTTTGCCTGAGATCTACCTTCATACCTTCTGTGATTACTCCTTGCTTACAAAAAAAATCCTATAATAGGAAATCTGGGCAATGCAGGGACAAGCACATCTTGTACTATGTCAAATGGAGGACTTAAACTGCTCATCTGGAGTTTCTAAATCCCTGCAGTTACCAAGCAGCTATTGGGCTTGCAGATAAATGCTGCAGTGACTGTTGTGTGGTGCCTCAGCTTCACGCTGTCAACGAGAAGGAGGTGGGGGAGGACTTAACACAAGGAAAGTTTGAGCTTCCCTTGCTCGGCACATGTCCTGGAACAATTGCTGGGAAGGAGCACATGGGATGCAGTTAAATGTCATGCAACATTGTCAGCATGAGCGTCCAGATTCGGTCCTGCTTATTTCCACTTTAGATACTTACAGTATTCGTATGGAGCTTGGAAGAGGTACAGCTCTGCTCCTTTGTTTGCCTTACTCATTTTACGTTGCTTGAACATGTTGTGTCTTTAATGGTGGTAATGGTGCAGACTGATTGGAGAACAGACAGTGTCATTAAGGTGGGCATCTTAGGCGTGTTTTGCCTTTTTGGTGGAGGGGTGGTGAAACAGCAAAGGATGCTTCAAAATGCTTTTCCAGGTGAAATCCAGGTGATGTCAAAGACCCACATGTAGTCAAACTCGAGCATCTTTTGCTTATCTGATACATAGCCAGTTTTTTTACTGTTCTGCGATAACCTTTGACATTTAATTGTACCAGTTGGTTGCATGAGGCCTTTATTCTCCCTTTGGAAAACATTTCCCACTGCTTACAATTTATCAGTTACAGTAACATGAGGATATGTATTACTTCAGTCTACATCCATATTCTGTACACGTGTTTACAGGTAATACATCCGTGTGTCTCTGGTGCAGTATATTTGTAGCAGTAGTGACCTAAGCTTTTCTTTGGTCTTGCAGCATTTTGTATTCTCTGGTAAAAGCGATTGCATCACACTTCAAGAAATTGCTAAGAATGTGAGTTTACTTTAGAAAACAAAGTACTTTTAACAGATTTTTAATCATCAGTCTGATTGGTTCTGTGGTGTTTTGGTCTCTTTTCAGCTGTAAGTTACTGGGTGACAGATAAGATAAGGCAGATGTTCGGACACTTGATCAGCAGCACTGCTCGTGGGTCTGTGAATCCTCACCGCTGGTAGTTGTGTGTTAGTAGAGAGTGTCCCACTGAAAGCTTCTCTCTGTTTGCTTGCAG
Seq C2 exon
ACAGTCAGGCTGACACAGAGGCACCTGCTACAGGAGGTGAAGTCTTGGACCTGACGTCCTGTGAGAAGGAGCAGCCAGAGGAAGTCAGCGAGCTACCAGGGAGTGAGTGCAGCCCCCAGGAGGAGCAAAAGGCTGACTCCCCTCCAGCAGAAGAGGATGCCGAAGAAAAAGCAGATGAATATGAAGAGGGCCCTGAGGAAGATTCTGTAAGTAACAAAAGTCTTGACCTCAATTTTGCCAGCAAGTTAATGGACTTCAAGCTGGCAGAGAGTGACCAGAGCGCAGGCAGCAGTTCTCAGACTGAAAGGAAACATGCCTGTGATGTTTGTGGCAAAACCTTCAAGTTTGCTGGCACTCTTAGCCGTCACAAAAAGGCCCACATTCGTGAGGACAGAAAAGATGAAAGGAGCAGTGAGGATGAAAGCAAAAGCATCCAGGATGATGCAGGAGCTCCCTCGATGCAGGACTCCGGTCTTGAGCAGGAAGAGTCTCCGATGGACTTGAAGGTAGTGGAGTCTCCTCTGGACTGTGAGGCAACAGGAAAGGAGAATGAAGAGAGCGAAAGCATCTCTGAGGGGGAAGGCACAGAGAGAAAGTCCACTGAGAAGAGCAGTGATGACAAAATACCAAAGACTGATGAGGCTAAGAGTACTGCAAAAGCAGACAAAAGAAAGAAAGTCTGTACTGTGTGCAACAAGCGTTTCTGGTCTCTGCAAGATTTGACGCGACATATGCGGTCTCATACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000012799:ENSGALT00000037239:9
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.375 A=NA C2=0.832
Domain overlap (PFAM):
C1:
PF134651=zf-H2C2_2=WD(100=2.7),PF134651=zf-H2C2_2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=3.2),PF0009621=zf-C2H2=WD(100=2.5)
A:
NA
C2:
PF0009621=zf-C2H2=WD(100=9.2),PF134651=zf-H2C2_2=PU(40.0=4.0)
Main Inclusion Isoform:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]