GgaINT0100455 @ galGal3
Intron Retention
Gene
ENSGALG00000016083 | Q70UN6_CHICK
Description
NA
Coordinates
chr2:136944422-136962144:-
Coord C1 exon
chr2:136962014-136962144
Coord A exon
chr2:136944617-136962013
Coord C2 exon
chr2:136944422-136944616
Length
17397 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGT
5' ss Score
10.03
3' ss Seq
TTCTTCTTTAATGGTTTCAGGAT
3' ss Score
7.92
Exon sequences
Seq C1 exon
GCTTTATTTAAAAGGTCACAGTGGAACAGCTGGAAAACAGAGTAGCCTGATCCTGCATGGTGCTGAGTTCAGTACGAAAGATGCTGACAATGACAACTGCATGTGTAAATGTGCTCTCATGTTAACAGGAG
Seq A exon
GTGAGTACAACCCTAAAAATATGTAATACATTGTTGAGAGTCCACTGTATTTTCCTTAAGCAAACACGGATGAAGTTGCATGCATGGATGTGTAAGTATTATGTGAAAATTCCTTTTATTATTATTACTCCTACACTTTTCTTTTTGTATGTTGTGGTAGTGCCAGTACCCCTTGTGGCAACAAATTCAGTAGGGAAAGCACAAGTCAGCATTCTTGTTGAGGTAAGAAAGGCAAAGTAAGAGGGAAGAAATGAAGAAATGAAGAAGGGGGAAAGGTCTTTATAAGACGCTGGAAAGGAATACCTCAGAAACAGAGGTGAGAAAGGACAGGGAAATAGAAACATAGTTCACTCTGAAAATAATGTCTACTATTTATTTCCATGGAAATTACAGCAGACATAAAAAGCACAATAACACAATTTGACAGAGCAAATTCTCAGCTACCAAACACTACTTTTCAACAGTGTCACCACCATTAGCTATGCATTTTCACCAGCAGTGAACAGGAAGAACCTGCATGCTGGGCCCATAACAATCTGCACCAGCAGAGGTTTCACAGCATTGTTTCACAGCTGCTTTGATGACATCATTGCTAGGAAAATGTTGCCACACAGTTATTTCATTGGGCCAAATAGACGGAAAATATTTCCAATCTATATGGTGAATATGGCAGAACAGTCCAGCCAAGATTGGCAGTGTGCTCCACAGTCTTCAAACTGATATGAGGCCTGGAGTTAATTGTGTTGAAAGAGAAAGATTTTCTTCTCTAGACTGACTTTGGAAGTTTGGAAGTTCAGTCAGTGTTGTGATGTAGCATTCAGAGTTGATGGTTTTTCTGAGATCCAGAAAATCCAAAAGAATCACACCCTTCCTATCCCAAAGGACAGTGCCTATCACTCTACCCTCGGAGGACTGTCTCTTGTACTTTTTTTCAATGGGGAGTTCACATGTCACCACTCCATGGGCTGCTGTTTTGACTATGGCTTGCAGTGATGACACCTGTAATGATGCAATCCAGGGAGCTGTTTCTTTCAGCCTCATATTGGTTCAATATATCAGGGCAGATTTACATATGATGTTATTTCTGCTCCTCTGTGAGAATTCATGGGACCTACCTGGGGCAAACTGCAATATTCCAGCATTACCATTATTGTTTCCAAGCACTGAAGGCAACAGTGAGCTCTGTACAAAGTTCTCTGATTGTAATTCACCAATTCGTGTGGATGAGCTGATTGCATGGTGTGACAACTGGGCATGACCATCTGGAATGTGGCTTGTCTTTTATGTTGCTCTCACCACTGCTGAAATGCACTACCTAAGATGAATGTTGAGTGTCAATGGGTGTAACTTTGTCCACACGAAAAAATTCAACAGCACCTGTTTGCTTCATATGTATTTCCATGTCAGACAACATTTTGTCAGACTGCCCCTCTGCTGCCATCTGTCACATGGCAACAAAATGTAACAGAATATTGGTGGGAAGGTCCCACCTCTGACACACCACCAACATCCACCTCTGACGTCATGGACAGGCATAATAAGGTAGAAGGCATTACTTTCAGAGCAGCCTTCATAACAGAAGGTAAAGTTTAAGTATCAGAACCTGGATGTGAAATATATTATGAACTTCACTTAGGGGTGAGATACTACTATTGAAATAACTACTGTGATTCATCTCTCTGTCTTATGTACACACACTTGTGAAAGACAAGACCTGTAGACTCAAATCATGGCACTTAAGTGTTCTGTAATGTCTAAAACAACATCCTTAGTAAGCAGAGTCCAGATGCATAAGACAAGAGGGAGGAACTGGGGTGATGGGAGATCACAGAGAAGTAACATCTGGGCAGCTGAAAGAATGAAATCAATCTGACTACCAGTAAGTGTAGCAAATGTGACTGACATTTGTTGCCTCCAATGTGGAGGAGGAATATCCAAGGTTAGCTCCCCATATAGATGCCTAAAAGAGATGCAAAAGAGTCAGAAATGTCTCTTAAAATTGGTGCTTATTCTGAGTCACTGAATGGGCAAGGTCATTTTTACCTCTTGGACATCGCACTGAAGGAGAAATCTTGTGCTGAGATTCTTTGATTCATAGACTGCATGACCAAGAAAGGCTCTTATCTTCACATCCGATCTTCTGAGATTTCTCAGTGATTTCTAACTTTCTTGGAAAAAACTCTGGAGCATAAAAATTATACAGTATTTTGGATCAGACTTTAAACCTGTTATTATTTGTGGTTACTGGCACTCTGACTATATCCAACTCAAGCCACATTCAGGCATATATGAGACTATCACCTTTTAACAGAAGATGGGTTTTTGTCACTGGAAATTCTTAGCAAATGCACAGCCTACCTCCTCATTCTGTTTCCTAATTGGATATTACCCAGGTGGCAGTGTCTTTAAGGAGTTGATTTTTTTTATTAAATGTCAGTTCAGGAAACTTCTTCCAGCAGACAAGTGATCAGAGAATGCTTTCCCATTTGTGTAACAGAAGTTACTTCTGGGGCAAATAACGGGTAAGAAGTCAATAGTTGATTTTAATTAAAACTATTATCTTTCCCTTTAGAGACCATGCTAATGGGTAAATACTTCCAGGGCAGGTCAGAGCCCAGTGAGAATCTCCTAAATGGGAGTTATGTCTGTGCTGAAGTGCATATTCATTCATGTATCTTAGCTGCCTGGAAAACCACTTCTGCTCCTAGACAGCTAAATCTGGGAGCAGTGAGTTTTGTTTATTTTCCTAACCTGACTTCTGTGGCAGGTCAATGCCCTACTAAGGTCAGCCTGCTATTGAACAACCATTCCACAAAGATTCACATATATTCTGCTGCAGCAGTCCCGTAAATCAGCAGAAAAAGCACAGACTGGAATATGTTGGTAGCATTTGAAGGGAATACATAGGAATGGGGTGAATTACCAGAGGGTGAGGAAATCACAAATTGAACAAATCACTGCAGAGTAAAAGGAGATGCAGCTAGGCCTGGAAAAAAAGTGACTGAAGCAGCTGTGCAGCGTTTAGTAAGGTGTAGTACTTCAAGAAGAGAAAAACCTCAGTCATGCAAATTGCTTTAGAAACATGAATCAACCTCCCTGCTATATCTTCCTCAAATATTGCTGTGATTTACTCCTTGAAAAAGACTTTCTCATTCCTGTACAACTATCTGAAATTGAATTAAATACCAAAACATTATTTTAGTGAGTAGATTTCAGTTTTATGCCACTGAAAATGACTGATTAAAGTAGCAATCCAAAAGAGGCTTTGGAAGAGCTCTTTTTTTTTTGAAAGTTATCAGACTCTCTGTTAGTTTTGGCAACATCACAGACAGCACATTAATGATGAATGATATGAAATCTAAAGTCAGGTTCCTTGCTATCTTGACAGTTTGGGTGATCTTGTTATCTCTATGAGGTGAACTGAATATATTTATGTCAGGAATAAAACCTGAGATAAGCTGAAGCTCAGAACTGTGATATGGTTACAGTCAAGGCTGAAAATAAAAATGTAAGGAGAACACACATTTCTCTCTGTGATCTTACTTGTTGTCAGTTTTATTTGGTCTATATAAAAAATATTTTCTCTCCTCCTTTCTACCCTTTTTCTCTCCCAGAATAATAATAATAAAAAAAAAACAGTGAGAAGATTATATTATAGCATCAACAAAATTTTGTGTTTGTGCTCCTTGTCCTTTTGAGAGCCACGTTTTGCTAGTTGACTCTATCCTAATACTGATTTTAAGGAATAGTTTTAGTATGTCACATATGAGCTGGATACTCAACTCCTGTGAACTTTTTACAAAAGTTAAATGTTTTAGCTGGTTTTTTTGTTTGTTTGTTTGTTTTGGGGGGGTGTGGTTTTTTTTTTTATGGAAAACCTGGGAAATTTCAACTAAGCACCCTCAAATTACTCTAAGTGGAGAAAAAGTATATTTATTGATATCATTTCATCATTTAAATTTGACATTTGTCAAAGTAGCATCATCTTTTTCTTTTTTTTTTTTTTTTTGAAAATAACCACCAGGGATTTGTGCAAAATCTCTGAAAAGTAAACTGAACAAAAGATTGTGTTCCCATACCATTTCAAACGTTATTCTAGAAGAGTACCCCAGCGATCTACATGCACAGCTTTTTGTAAGATACAGCACTTCAAACGTAACAAGCTCTCATCAGAAAGAAGCACTAGATAGGTATTCAGGGCACTTCAGATTGATTTGCAGTGTAAGAGCACTTAATATCTGTGGATCAGATCTGTTGGCATCAGGCCAAATTAGAGCATCCTGCCAGGTACCACCTGGCAGCAGAGCCCCAGAAATTGTTTGTACAATCACCTACAGGTGCTGCAAAATGGCTTAGAGTAACTTGAACTGTAGTGAAAGTCTAAATATACTTTGTCTTGTCTTTGCTACAAGCTGAGGTATTTAAACAGACATTTAACTTCAGGTGACTGGTGAGAACATAATTAATCCTGCATTAAGCTTGCCAAAGTGATATGGGGACATTCTAGATGTCTAGCTAAGACTGAAAGAGCGTACAATTGTTTAAAATCATTATTTTTTTAATTGACAGGAAGTAGAGGTCCACTTGTCCGTAGCCTTCTGTCTCCAACAACAGTAAACAGTAGATACCTCAACATGGGTGTAAAAACAAAGCAAACAAATAATACTGCCCCTGTGTATTTCCCTAGTCTCAATCTTCTGCATCTAAAGGATTTCTTCAGTCAGAGACATTTCCCATGAATATATTTAACAGTCCTTGGTGTATTTCTTGACTATTTGGTGAGGCACTGTTTGATGGGCAATCCCAAACAGTGGTGCATTTATTGTTTAACTTGTTGTTCCTCTAAGTGGCAAATTTTACAAATTTTACAAATTTTATTGCTCTCTGGCAAGAGCAATATAGAGGATTCTTATCATTTTTGGAGGGAAGTTCTTGTTTAAATGTAGAACTCTGTCCCTACGTGATCTGGTCAGAATAAAAAATAGAGCTTCTGTTATATTTCATTTGAAACAAAAGCTTTGAAAGCAGTAACCTCAGTGTACTTGAAATTATCTGGCCTGAATCCCAAGGATATATGTCCATTTATGCAGGAAAGAACTAAATTTTACATTCCACTGATCGTTACTTTCATAAAAATGTTACATATAAAGCACCATCCATGAAGGATCNNNNNNNNNNTTGGTGACCTGATTGTTTTCTCTTGCTGTTTCAGGCTTTCCTTTAAGGTCACAGTGGAACAGCTGGAAAACAGAGTAGCCTGATCCTGCATGGTGCTGAGTTCAGTACAAAAGATGCTGACAATGACAACTGCATGTGTAAATGTGCTCTCATGTTAACAGGAGGTGAGTACAACCCTAAAAATATGTAATACATTGTTGGGAGTCCACTGTATTTTCCTTAAGCAAACATGGATGAAGTTGCATGCATGGATGTGTAAGTATTATGTGAAAATTCCTTTTATTATTATTACTCCTACTCTTTTCTTTTTGTATGTTGTGGTAGTGCCAGTACCCCTTGTGGCAACAAATTCAGTAGGGAAAGCACAAGTCAGCATTCTTGTTGAGGTAAGAAAGGCAAAGTAAGAGGGAAGAAATGAAGAAATGAAGAAGGGGGAAAGGTCTTTATAAGACGCTGGAAAGGAATACCTCAGAAACAGAGGTGAGAAAGGGCAGGGAAATAGAAACATAGTTCACTCTGAAAATAATGTCTACTATTTATTTCCATGGAAATTACAGCAGACATAAAAAGCACAATAACACAATTTGACAGAGCAAATTCTCAGCTACCAAACACTACTTTTCAACAGTGTCACCACCATTAGCTATGCATTTTCACCAGCAGTGAACAGGAAGAACCTGCATGCTGGGCCCATAACAATCTGCACCAGCAGAGGTTTCACAGCATTGTTTCACAGCTGCTTTGATGACATCATTGCTAGGAAAATGTTGCCACACAGTTATTTCATTGGGCCAAATAGATGGAAAATATTTCCAATCTATATGGTGAATATGGCAGAACAGTCCAGCCAAGATTGGCAGTGTGCTCCACAGTCTTCAAACTGATATGAGGCCTGGAGTTAACTGTGTTGAAAGAGAAAGATTTTCTTCTCTAGACTGACTTTGGAAGTTTGGAAGTTCAGTCAGTGTTGTGATGTAGCATTCAGAGTTGATGGTTTTTCTGAGATCCAGAAAATCCAAAAGAATCACACCCTTCCTATCCCAAAAGACAGTGCCTATCACTCTACCCTCGGAGGGCTGTCTCTTGTACTTTTTTTCAATGGGGAGTTCACATGTCACCACTCCATGGGCTGCTGTTTTGACTATGGCTTGCAGTGATGACACCTGTAATGATGCAATCCAGGGAGCTGTTTCTTTCAGCCTCATATTGGTTCAATATATCAGGGCAAATTTACATATGATGTTATTTCTGCTCCTCTGTGAGAATTCCTGGGACCTACCTGGGGCAAACTGCAATATTCCAGCATTACCATTATTGTTTCCAAGCACTGAAGGCAACAGTGAGCTCTGTACAAAGTTCTCTGATTGTAATTCACCAATTCGTGTGGATGAGCTGATTGCATGGTGTGACAACTGGGCATGACCATCTGGAATGTGGCTTGCCTTTTATGTTGCTCTCACCACTGCTGAAATGCACTACCTAAGATGAATGTTGAGTGTCAATGGGTGTAACTTTGTCCACACGAAAAAATTCAACAGCACATGTTTGCTTCATATGTATTTCCATGTCAGACAACATTTTGTCAGACTGCACCTCTGCTGCCATCTGTCACATGGCAACAAAATGTAACAGAATATTGGTGGGAAGGTCCCACCTCTGACACACCACCAACGTCCACCTCTGACGTCATGGACAGGCACAATAAGGTAGAAGGCATTACTTTCAGAGCAGCCTTCATAATAGAAGGTAAAGTTTAAGTATCAGAACCTGGATGTGAAATATATTATGAACTTCACTTAGGGGTGAGATACTACTATTGAAATAACTACTGTGATTCATCTCTCTGTCTTATGTACACATACTTGTGAAAGACAAGACCTGTAGACTCAAATCATGGCACTTAAGTGTTCTGTAATGTCTAAAACAACATCCTTAGTAAGCAGAGTCAAGATGCATAAGACTAAAGGGAGGAACTGGGGTGATGGGAGATCACAGAGAAGTAACATTTGGGCAGCTGAAAGAATGAAATCAATCTGACTACCAGTAAGTGTAGCAAATGTGACTGACATTTGTTGCCTCCAATGTGGAGGAGGAATATCCAAGGTTAGCTCCCCATATAGATGCCTAAAAGAGATGCAAAAGAGTCAGAAATGTCTCTTAAAATTGGTGCTTATTCTGAGTCACTGAATGGGCAAGGTCATTTTTACCTCTTGGACGTCGCACTGAAGGAGAAATCTTGTGCTGAGATTCTTTGATTCATAGACTGCATGGCCAAGAAAGGCTCTTATCTTCACATCCGATCTTCTGAGATTTCTCAGTGAGTTTCTAACTTTCTGGAAAAAACTCTGGAGCATAAAAATTATACAGTATTTTGGATCAGACTTTAAACCTGTTATTATTTGTGGTTACTGGCACTCTGACTATATCCAACTCAAGCCACATTCAGGCATATATGAGACTATCACCTTTTAACAGAAGATGGGTTTTTGTCACTGGAAATTCTTAGCAAATGCACAGCCTACCTCCTCATTCTGTTTCCTAATTGGATATTACCCAGGTGGCAGTGTCTTTAAGGAGTTGATTTTTTTTATTAAATGTCAGTTCAGGAAACTTCTTCCAGCAGACAAGTGATCAGAGAGTGCTTTCTCATTTGTGTAACAGAAGTTACTTCTGGGGCATTTGTGGAATGGTTGTTCAATAGTTGCTTTCCATTGTAGCTCATATCTTTCCCACAGAAGTCCAGTTTAAAAAATAAACAAAACTCACTGCTCCCAGATTTAGCTGTCTATGAGCAGAAGTGGTTTTACAGGCAGCTAAGATACAAGAACATTCAGCACTTCAGCACACACAAAAACCACATCTGCTCCTAGACAGCTAAATCTGGGAGCAGTGAGTTTTGTTTATTTTCCTAACCTGACTTCTGTGGCAGGTCAATGCCCTACTAAGGTCAGCCTGCTATTGAACAACCATTCCACAAAGATTCACATATATTCTGCTGCAGCAGTCCCGTAAATCAGCAGAAAAAGCACAGACTGGAATATGTTGGTAGCATTTGAAGGGAATACATAGGAATGGGGTGAATTACCAGAGGGTGAGGAAATCACAAATTGAACAAATCACTGCAGAGTAAAAGGAGATGCAGCTAGGCCTGGAAAAAAAGTGACTGAAGCAGCTGTGCAGCATTTAGTAAGGTGTAGTACTTCAAGAAGAGAAAAACCTCAGTCATGCAAATTGCTTTAGAAACATGAATCAACCTCCCTGCTATATCTTCCTCAAATATTGCTGTGATTTACTCCTTGAGAAAGACTTGCTCATTCCTGTACAACTATATGAAATTGAATTAAATACCAAAACATTATTTTAGTGAGTAGATTTCAGTTTTATGCCACTGAAAATGACTGATTAAAGTAGCAATCCAAAAGAGGCTTTGGAAGAGCTCTTTTTTTTTTTGAAAGTTATCAGACTCTCTGTTAGTTTTGGCAACATCACAGACAGCACATTAATGATGAATGATATGAAATCTAAAGTCAGGTTCCTTGCTATCTTGACAGTTTGGGTGATCTTGTTATCTCTATGAGGTGAACTGAATATATTTATGTCAGGAATAAAACCTGAGATAAGCTGAAGCTCAGAACTGTGATATGGTTACAGTCAAGGCTGAAAATAAAAATGTAAGGAGAACACACATTTCTAAGGGTGATCTTACTTGTTGTCAGTTTTATTTGGTCTATTATAGAGAATTTTCTCTCCTCCTTTCTACCCTTTTCTCTCCCAGAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCTGTGATCTTACTTGTTGTCAGTTTTATTTGGTCTATATAAAAAATATTTTCTCTCCTCCTTTCTACCCTTTTTCTCTCCCAGAATAATAATAATAAAAAAAAAACAGTGAGAGGATTATATTATAGCATCAACAAAATTCTGTGTTTGTGCTCCTTGTCCTTTTGAGAGCCACGTTTTGCTAGTTGACTCTATCCTAATACTGATTTTAAGGAATAGTTTTAGTATGTCACATATGAGCTGGATACTCAACTCCTGTGAACTTTTTACAAAAGTTAAATGTTTTAGCTGGTTTTTTTGTTTGTTTGTTTGTTTTGGGGGGGTGTGGTTTTTTTTTTATGGAAAACCTGGGAAATTTCAACTAAGCACCCTCAAATTACTCTAAGTGGAGAAAAAGTATATTTATTGATATCATTTCATCATTTAAATTTGACATTTGTCAAAGTAGCATCATCTTTTTCTTTTTTTTTTTTTTTGAAAATAACCACCAGGGATTTGTGCAAAATCTCTGAAAAGTAAACTGAACAAAAGATTGTGTTCCCATACCATTTCAAACGTTATTCTAGAAGAGTACCCCAGCGATCTACATGCACAGCTTTTTGTAAGATACAGCACTTCAAACGTAACAAGCTCTCATCAGAAAGAAGCACTAGATAGGTATTCAGGGCACTTCAGATTGATTTGCAGTGTAAGAGCACTTAATATCTGTGGATCAGATCTGTTGGCATCAGGCCAAATTAGAGCATCCTGCCAGGTACCACCTGTCAGCAGAGCCCCAGAAATTGTTTGTACAATCACCTACAGGTGCTGCAAAATGGCTTAGAGTAACTTGAACTGTAGTGAAAGTCTAAATATACTTTGTCTTGTCTTTGCTACAAGCTGAGGTATTTAAACAGACATTTAACTTCAGGTGACTGGTGAGAACATAATTAATCCTGCATTAAGCTTGCCAAAGTGATATGGGGACATTCTAGATGTCTAGCTAAGACTGAAAGAGCGTACAATTGTTTAAAATCATTATTTTTTTAATTGACAGGAAGTAGAGGTCCATTTGCCCGTAGCCTTCTGTCTCCAACAACAGTAAACAGTAGATACCTCAACATGGGTGTAAAAACAAAGCAAACAAATAATACTGCCCCTGCGTATTTCCCTAGTCTCCATCTTCTGCATCTAAAGGATTTCTTCAGTCAGAGACATTTCCCATGAATATATTTAACAGTCCTTGGTGTATTTCTTGACTATTTGGTGAGGCGCTGTTTGATGGGCAATCCCAAACAGTGGTGCATTTATTGTTTAACTTGTTGTTCCTCTAAGTGGCAAATTTTACAAATTTTACAAATGTTATTGCTCTCTGGCAAGAGCAATATAGAGGATTCTTATCATTTTTGGAGGGAAGTTCTTGTTTAAATGTAGAACTCTGTCCGTACGTGATCTGGTCAGAATAAAAAATAGAACTTCTGTTATATTTCATTTGAAACAAAAGCTTTGAAAGCAGTAACCTCAGTGTACTTGAAATTATCTGGCCTGAATCCCAAGGATATATGTCCATTTATGCAGGAAAGAACTAAATTTTACATTCCACTGATCGTTACTTTCATAAAAATGTTACATATAAAGCACCATCCATGAAGGATCATTTATGTTACCTAACATTTTGTAGACAGAGGGATATAACCACCATGTAGATATGAATTTATTGGAATTGCTTTGATTTATGCTAGAAATGTTAGAATCATACAATCACTTAAACTGAACACTTAAAGATGTGAGGGACATTTAAAGGCCATCTAGTCCAACTCCCCTGCAATGAACAGGGGCTTCCACAGCTAGATCAGGTTGTCCAGGGCCTTATCCAGACTCACTTTGAAAGTCTCCAGGGATGGGGCATCCACCACATCTCTGTGCAATCTGTTCCATTGCCTCACCACCCTCACTGTAAGAGACTTTTTCCTTATATCCAATCTAAATCTACCCTCTTTTAGCTTGAAGCCATTTCCCCTTGTTCTATCACCACAGATCCTGCTTAAGAGTCTGTCCTCTTCTTTCCTGTAGCTTGCCTTTAGATATTGAAAGGCTGCTGTCAGGTCATCACGGAGCCTTCTTTTCTCCAGGCTGAACAGCCCCATCTTTCAGCTTGTCCTTGTAGGAACAGCCCCAGCTCTTTCAGCAGATCCTTGTAGGATCCTTGGATTATTTTTGTTAGATGTATTTCATTAGGTGTATGACTACTAAGAACATCATCATTATATTACCATGTTTATAAATGGTAAGTATGGACAATAGTAATAAGCATTAGGAGAACAAGCAGAACCAAGTAGTGACTGACATATAATTCAGTCTGTTCATGTATTTTGATGAGAACGTGTTCATCAGTCTGCAAGTCTCATATTATTTTTACTTCACAGTTTATTAGTATTATAAAAGGAGTGCATCTTTCAGGTGATATGAAAAGATAATGACTTCTCATTCTATATACTGATCGCTGAATTCTAATTTTATTTTCAGAGTATCGAGTACCAACAACTAAGTCATAGTCTGACCAACCCAACAGTCTAACAAACAATAGAAAATAGGCCAGGAAACAATCTTCCTCCCCAAGACAGATTATTCTGTTCTTCTCTACATATTTATTTTTGTCTTTCTGTTCATCATCAAGATTTCTAATGATAAAGATTCCATCTTGTAATACAATCTCTTACTGATTTTGGCTACACTAAGTGTAAGAAATTTTTTCTTGATGCTTAAACTAAGTCCATGACAATTTAACTTAGTCCCATTTTGTTCTATCCTTTATTACTGGAAAGAATGGATTCTTCCTTGCATTCTTTGAAAAAAAATGCTTTTATTTCAACAGGTTTCCTATAAATTTGAAATTTTTAGGAATTCCCTTCTGTCTTCTGTACTCTAGATTAAGCAAACCTACATCTTTCCTCTTACATTAACTTTTTTGGAGTCCACCGAGTTGCTACAAGCATAGCTTAAGGTGTCATTCACCGCTGGACCCAGTCTTCTAGCTGAGCAGTTATCAATGCAAGAGCAAACTTTAAGAGCCTAAGTATTACCATCTAACTTATTCAAAATATGAAAGGTTGGAAACATTGAAATCATTCATAAAATAAACTGTCTTCCAAACATTAAAGGCTGTTTCACTATTTTGGCATTAGAAATTTTTCTTATTGGTTTTACTGCCAAATTCACTAAAATTTTATGAACAAAACCAGAAGACTAGAAAGAGACATTGGTTTTATAGAATCCATTTGTTCCATAACATCATAAAAATGTGTGATTCAAATTTTGCATATGATTGACCAGTCTGTATTTGAATCTTGCTGAAGTTAGAGATGTTCGCAGTAATCAAGAGGGAGAGGCAAGGCTGAAGTGTAAAGAAAGGGTCATCATCAACTGTTCAGAGTTTAGACATCTATTCCTTTAGCTTGCAGAAAGCAACTAATAGTCTCTCATCAAAGCTGAGTCATTACTGGAAGTTCTCAATTCACACTAGATTTACAGATCATTTGTGAATTTATCATCACTAGGTTACTAAAAAAAATTCTACAAATATACAGGTTTAATTACAATTTCTACAAGCAAGCAAAAAAAAAAGTTGCTAACATTGGTGTATATAAAGCCTTTTCTATGTTTTTACTTTCAACAACAAAGTTTCTACTATATGAAAATTGTGTTCTTGACATCAGATAACCATTATAAAAGATTTCCACTATATTTTTCTAGTAATATCATTACTCATTTGAGCAACAATACTTTATTAGGTAGGGCTTTGTTCATAAGAATTTGCAGAAATTATCTCAATGTACATTCATATTCAACTAAACCTATGGTAAATACAGGTTTGTGAAGCTGATGTGATGATAGGTGGTTTAAGATGACTGAACTATTCAAAATTCATTTATTTAAAGAAAAGAGATGATGACATCTAACAACTTCTCAGAGGTAACAGTAATAGTAATTAAAGAGGAGTGCATAGGATTTCACAAAACATAAGTGTGCTTTACTCCAGAAGAGCAACTGTCTACAAGAGTGATTCATGTTTATTTGCATAGCTTACTTTCAAACAATCTAGCAATGTAACATCTAAATTACTTTTTGTTTGGAGAATATACTTTATGACCTAAGGATTGTTATTGCGAACAGAGATGACAGAATTCCTTATAATACAAAAGAAAATTATTACAAGTGGGGGTTAGCCACAGAAGACTGTAAGACTATCCTCATTTCAAATAAATAACTAAGCACTTGATGTTGACAGCAGCTAGAAGAAACTACCTGCATTTCCAAGTAAAAACTTTCTTAACCTTCTTGTGAAAGCCTCCCCTTTATCACTTCATTCGTCACTTTAATATCTGTCTTCTACTATTATTTCTCATAATGTCTACCTTTCATGATCCACATGCATGATTCAAATGTCCCATAGAAATCACTGCCAAAAGTTATATCTGAGGTTAGAATCTCACTACTATTCCAAATGGTCTTGATGCTTATTTGGGAAATCCATTACCTTGTAGTGAAACATAAACAAGATTCTTCAGTGGAGAAAAATCCTGTGAACATCAGGAAATAAGCCAACATCTAACTACTGGGAGTCTTTCCTTGTTTCAGATTGTCTCACAGCCCTGGAGCTGCTTTGCTTGATGTTTCCTGCACTGCCCAGTGTTGTAGGTATCTCTTTTAGGTACTTCAGTTTTATGTTTCCCCATTTCATCATAGCTACCAAGAAAGGCACTGTTTCTATTCCTCTTTCCCCAGTCCATAAAGTTGAGCTTGTAGGAAAAAAACACTTATATTGCATTTATGCAAAGATGTTAACTTTGCTGTTGAGATATGCACTTTTTGTGATAATCTGAGACCCTATGGGGAGTGAAGTGTTTTTTGAGGACTAAATGGGAAAAAGTAGAGAAATGATCAAATGGAAATAAATAAATAAATAAATAAAGGGGAAAGGTTGTTGTTGTTGTTGTTGTTGTTGTTTTGTTTTAAGAAGGATACAAGAAAGTAAAGCCAGCATCTTAATGTAGTATTAGGAAACATCTTTTTTAAAAAATCAGTCTCACAAACAAGTCCAATACAGTAGGCAAAAAGAAATGCTCACTAAAACATATTTTGAAAGAACTAATTATTTAAAATTCTGTGATGTGAGAATTAAGTGGGTCCTCACAAAATAGTTGTAGAATCTTTTGTATCTTTGAATCATTCCATTGTTTAACACAATGTGTTTAACACAAATTCTGAATAGCACTGCTGAAAACCTTCTCCCCAAAATGTCAGTTCATGTATCTGTTGCTGTTCCTTTAAGGTGAATGAAATGGTATCTAGCACAGCTTGACATATCTTCATCCCAGCACTGTAAACAGATCTCAACTGCATCTGTGTTCCAACTTTGAAAAATGAGGATTAGATTTTCTCTGTTTAACTTTGTCTTAAGTTTCTACAAGATTATACTCTTGTTACAGTAAAACATTGTCTGTACAGCTTTCTCTTTCTTTGCTTATTACCCCCTTAGGTATATCACTGTAATCAAAGGGAGGTCAATTTTATTCAAACAGAGGTCTGCCAGAATTTATCTGGCATAAATTCTTCCCTTAAGATTTCACTATGAAGTGTTACTTCTGAAAAAAACAACAACAACAAAAAAACCCCACTAAGTATCATCCAAAATCTAAGAAATTACTTTACAAGGCTAGAAACATAAAGGACAGTGTAAACACTGGGTCTAAATCACTGCCAATGTTTTATCAGTAGTAGTAGGGTATGTCTTAGGATACCCTTGTACAGTGTATTCATTACAGATGGATAAAAGGTTCACTGTCAATATGAGGATACTGGAAGATTCACTAGGGCAGCACCCATTAGCTAAAAGAAGCTTCTCACAGTTTAATTCTGTTTTCAGAATTTAAAGTGGGAGCCACACTGAAAATTAAAATTCTGTATTTCAGTCCACAGTGGTACCTGGGGAGTTCAGTAGCCTCTCATTAGACAATCGTTTGCCTTTACTGGTGCCTGAAATAGGTTTGCAGGGGGTCCTGGACAAATTATAATGCTGGGATGACTTGTTTTTTAAAGCAAGGAGCATCTAGCTATCAAGAGTAACAGCCATCACCTAAACTTTATGACTTCATTTGCCTGAAGAAATAAAGGTAATAAAGGCAAATATTCAGTACAACAGTGTTATATGGAAAGATGCATAAAGCCTGTACTGAAGATTCAAGAAGACTATAGGACTCACTATGAAGAAAAGCTGCAGAAATCTTTCAGACAAATAGAGCTTCTAACCACCAAGGTTAATATGTTCTTGGCACTGGAAGTATTAGCTCTTTGCAGCCTGGGAATTCACTCTGACTTTCTCAGTCTGAACCAGGCATCTTTCTACTATATTACATAGATACTCTGTAAGGTATTGCAGAGAAGAATTATATTCCCAGCAAGATATGCTGCAAAACTCCCACTAAGTTCAGTGGAGTCAACCTGTCACCTAGTTTATCCGTATCAATTTGTGTTCTGTAATCACACTGTTGCCAAGTTTCATGTTGTTTAGAGTTTTCCTTAAATTTCCATCTTACCCTTAATGTGAATCTAAAATTCACATTAACATGAAAATATTTCAACTTTTCATACTGTTGAAAGACAAATATTTTGTGTAGGTTTTTTGTTCCTTAGTTTTCTTCTGTTCTTTGATTCCCTCAGGGCTCTTGGAGGCTGAAGGGCAAATCATCCAATTCATACTGCAGGGATGCTGCAAATGTTGCTCAGGGCTCTTCCATTCTAACACACACAAGTAGTTTGAGTGGGGTACTCTCACTGCATTTGATGTCTTCATCACAGTTAACTAATTTAGGGTTCTTATATTATTGAAGATCTTGGGAATGTAATCAAGAGAGGTTACTGGTTAATCTCATCTGAAAGCATCTACTTAAAATAGATCTGAAGAATCACACTTTTTTACCACTATGCCCATTTTCTCTCCTGGTTAAAGACATATATGCATATCTTAACTACAAATGTCTAAAGGCAAGATGCTATTTTTGCATACAGTGTTCAACAAAAGCTGTGCTCATAGCAGGTTTGAAATTTCTGCATTCAACCATAAAAAGTGATAGCAAAAATGCCATCACTGTTAGTAATATTCACAAGTAGTTCATAAGTATTTCTGGTTTATTTTCAGTGCTCTGTTAACAAAGCACTCACAAAGGTGCAGGTATTGCTCTACATGCATTTTCTTTGTCAGAAATCTCAGGTTGAAATGTTGCTGAGCTGTTGCATTTCTTTTGAGACCTAACTTCTTTACTGCTCCTTCAGTTATGCCAGCTCAACAATTCATGGAATCATTCTGCAAACCAGACTGGTGTTTTGTTGTCAAAAAGCAAAGATCTGTTTTTATTTTTTTCCAAAATCTGCATCACCTCACTTTTCAGAACAGTTGTATTTTATTTATATAATTAAGATTATAAACCTTTAAATTTGAATGGACATTTTGGACAGAGAATGTACAGAGAAGTGAAGAAATCTCAAATGGATCAGATGCAGGACTTTCCTCACACTAGTGACTGAATATTGTCTTATTATGGTAGGTTTACATGGATTGGATTAACTGTATTACTGTTTAAACACGCAAAGCAGTTTGTCTTTATTGTTCTTGTTCTTGCTTCACATTCAGTGTATACAAACAGAAGGTGTTAAATACTTTTCTAGATCTACAGATCTAGAATCAGTGCATTCTCCAGCACAACTGGCTACAGAAAACTACCCTCACCATAGAGAGCACAATACCTCTCTATTCCAGAATTCTTTATGAGCTTTATTAGCTTGTTCATGCCAGAAGTTGCTAATCAGCTAAACTTAGAAAAGTGAAGTAGTCTTAGTCTCTTAGTAGTCTTCCAGATAATTGTTCTTCTTTAATGGTTTCAG
Seq C2 exon
GATGGTGGTTCGATGCCTGTGGCCCCTCCAATCTCAATGGGATGTTCTATTCAGCTGGACAAAACCATGGAAAGCTCAATGGTATCAAGTGGCACTACTTCAAAGGCCCCAGCTACTCCTTGCGTTCCACCACCATGATGATTCGGCCCTTGGACTTTTAAAGGCTTTCAGTGGTGAATCCAAGAACAAACCAGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000016083:ENSGALT00000025915:8
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0014713=Fibrinogen_C=FE(20.5=100)
A:
NA
C2:
PF0014713=Fibrinogen_C=PD(23.3=92.6)
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]