GgaINT0107546 @ galGal3
Intron Retention
Gene
ENSGALG00000014178 | SCUBE1
Description
NA
Coordinates
chr1:70803354-70823965:-
Coord C1 exon
chr1:70823849-70823965
Coord A exon
chr1:70803471-70823848
Coord C2 exon
chr1:70803354-70803470
Length
20378 bp
Sequences
Splice sites
5' ss Seq
TTGGTAAGT
5' ss Score
10.47
3' ss Seq
CTTTCTCTTTCATTCTGCAGAAA
3' ss Score
11.54
Exon sequences
Seq C1 exon
TAACCTGTAACTATGGGAATGGAGGCTGCCAGCACACCTGTGATGACACTGATACTGGTCCTGTGTGTGGTTGTCATCAGAAGTATGCCCTGCATTCAGATGGACGAACCTGCATTG
Seq A exon
GTAAGTACTTCTCTGCAGCACATTTTATTTCATATTCCTCATAGAATACACATGTGCACATACGTGTGTGTGTGTGTGTGTGCGTGCACGTGTGTATGTTTGTATCCCACAGGAATTCAGCACCATTGCCAAGAGAAGTGTGTAACAGCAGTTCCTAGCCACAGTGGCAAAGCTCGTGCTACACATAGAGAGGAGCATCTGTGCGTGTTGTGTTAAAACGTTTGTTAATGGAGTATCCCTTTGTTACTCTTCTGTAACTTGTTGTTCCTTTTCATTACTCTAATAATTTCTAAAATAAAAAGGTGTAGAACTTTCGTTATGAGTGAAAGTTCAGCACTTCTGTTCATTTTCATGAGTAAGACTTCCTTGCATAAGTAAGGTGAGGAAGATGGTCTTCTTTTCCTAAGCTGCTATTGGGAAAAAAAAATTGTTCACTGTGACGTGCTTTCATCCCTGTTGTATTTTTTTATTATTCTAAAATGTACAGTACTTGTAGTCAATACACTTTCACTACTATTATCGATAGGGAAAAGCTGTCTGAGAGGCAAAGCTTCTTGGGCGATGCTGTGCAAACATTTATGATGGTAAAATGGATTATTTGTGTAACACAGTTTCTTTCCACTCTCTGCATTTTTTAAATGAAAGGGGATAATTTTGCATAATGCAAGTTAGAATTTGAAAATTCTTACAGATCAAAACCTGAAATCCATAATAGATAAGCATTGTGATCTTGCTGACTTGTTTTTGTTTGTTTAATTTCAGTTCCTTAATGAACTCCTACTAATTTCCTGAGGTAAAAAAAATGGGCACGTGTTTTCTCTCCTTTGTCACTACTGAAAGACAAAGCACTTGATCTAAACCCCATGGAAATCTGTCAGTTATCCTTAATGTTCCCTTGGTCAGATCCATGGCGTGAAACTCAGGGGTTGCACGGAGCCTCACTCACTTCTGATGGGTTTGATTGCCCAAATTTTGTGACGGGACGAGAGCTGTATTGGCAGAGGTAGAGCTGAACAAGGTTCAGTGCTAGACTCTGTCGTGCTGTGTTATGCACAAGCGATAGCTCAGCTCGCGGGATCTCTCAGCCAGTACTTTTTGATTAACACAGGGGGCTCAATCTTACAGGCCCTCTGTTTAAATAACCCTCCCTGAAGTCTGTGGCAGTTCCAGATGCAGAGAATTTGCAGGAATGAGGGCCTTAAGAGCAGCTTATATTGAATGGATAATTGATCTTCTGTTTCTTAGCATTCACTGATATCCTCAGATTGATGTTTTATATTGTCCAGCATGTAAAAATGGTTTCCAAAGCTGTGTACACTGCACCTGTTTTTCACTTTTTTTTTTTTTCCCATTTTTGTAATGTGATACATACAACTCCATGTTACATTCCTTGGTCTTGTGATATAAGTCACATATTACTGCCTGTGCTGATTTTCTTCCCTCTAAGTAGTTCTTTCTCTTAGAATACTTTGTAATATTTATTTATTTATTTATTTATTTTACATTTTTATTCCTGCTTTCTGGTGATGGTTCCTGATTGCCTGTCTTGTCTGATAACTGACGTTCATTAATTATTTACAGAGTAAAATAAATAATAATAATAAAAAAAAACTCAAACAAAAGCCTCTATTGCAGCCTGATCCCATCTAGAACTTGTTAAGAACAAAACAAAACAACTTCTTGTTACCACTCAACCATGTAGTGTTGCCACAAACAAAACCTGCCAGCCTCCTCCTCCTCCTCCTCACTTCAGTGATTCCAATGTTTGCTGTCTTCAGTGGTGTATATATTCCAGTCATCACTGCAAGAATGCAAACTTCTGCAATACCAGAGAAATACTTTTTGACCCTTTGTCTAACATATTTTGTCTTTGTTTAACTTATCCTTCTATTTTTTTATGTTTGCTGCATGTGAAAGTCCCCACCTGCACTTTGGTTTTTGTTTTTCTAATTCCTTCTCTGTATAAATCATTTTATTTACCAATCTGCTGCTTCTCCACCGCTCTCCTGTATGATAAATCTTTATTTTTATTTCACTTACCGATCATTTCTTCCCACACTTGTGACTGTTTCTGTGTATTTCTAATGAAACATAACCAGACTAAATCCTCATTATGCCGTCTGAAACTCTTACATATAGGATATCAGAGACTACTTTGTTCAATGACCTTTGCTGACATCGTCTTGCTTACTGCATGCTCATAAAGTTACTAAACCCTGTTCTTGCAACATCTTTTCTAGCATTGAATGTTTAGCTAGTAGTGTTTCATAGACAAGCAGGCAACCAGCACTGCCCAAATTGATCTTTTTTGTGTTTGTTTGGTTTGTTGTTTGTTTATTTTTGTTGTTGTTTTTGTTCAATTTGCATGCTGTTGTTTGATTCCTCTCCATGATGTGTCAATGTGTATGAGACTATGTTGCACCCGTACCCATCCATCACCGGACTCTTCTTGCTCTCTCTGTCTATCTTGATCTTCTTCCTGCCAACTTCAGATCGTGATGTCACCTGTAGCCTGAATCACTTTATGGTGTGTCTTTAATAGTTTGTTAAACTAGCATTCTTGAGTTTTAATTTCCATCATTAACTCTTCTCTGGGGCACTCATGTCAGCTGTCTTTTCTCCAGTAGGAATCCGTCTTCATGTATCTGGTTAATTACTTTGTAGTTGGCCATTCTTTCTCCTCCGCTTTTTCTTTCTCCTTTCCCCAGTTTCCCATTAATTTTTTCCTGGGGTCTCAAAGGGAATTAACTCTCTAACGGGGATTTAGTGCTTTCATGCCTTGCTTCTTGGCTTTGGCTGTGCCATGCCAAGAAACTGTCTTAGGCAGTGGAAAATTGGGCTTGTGATTAACCAACTGCTCCATGTTTGTCCCTTACTTGTGTTTTAGAGAAGGATGAGGCTGCAATTGAGAGTTCTGAGTACAATGCCACGTCAGTAGCTGATGTGGACAAGCGGGTGAAACGGCGGCTACTTATGGGTAACACTTTTCTTCCACTTCCTTTGTTGTGCTCTCACTTTTGTCTGTATGTGTGTGGGGGGAGGTTCTCTTTTGGTCTCATTTGGTCTTTTTGGTTTTGGTTTGGTTTGTGTTTTTTGTTGTTTTTTTTTTCTTTAGCTGGCTTTATCTGTGTGAAAAGGTCACCAATTTTTTTTTTAAGTCCTCATCTGTTGTACAACTTCATTTCTTGTTTTTAAACTTTTTTTTTTCGTAACGCTGCAGCTTTAATGTTCAATTTCTCCTGCACAGAAAGAAGCTTTTGCCATTAACCTTACTTACCTTATGCGAGCTACTTCTTATATGTGAATTGTGTGTTTGTGTGTATGTGTTGCTCTAGGATTCCTAAAAAAAATCTCATGTGTTGCAGACTTGCCTTTTGACTTAAAAGTGGATGATGGTGATAATATAAAACAATGTTCTATTACGTATGTAGTGTTAAATGAACAACTGTATTTGACTACTTAGAATTTGCAGTGCTTTTGATTGAAATGTAAATATTATGACTGGAAATTGATTTATTTCCTTTGTGTAGCTATGTTAGTAACCACTGAAAGATCTTTCCCTCATGACTAGAGCTTCTTTATGTTCATTCAAGACTGAAGCATGGCTTATTTCTCTGTGTTGTTGGAGCCTGAGAGTGAAGAAATGAGAAAGTGTATTGGACAATGTAGATAATTCTTTAGCTTCTCTCAGTTAACCCACTGCTCACTATTGTGCTGGTCTTCTTCATCTTACATGCATGGCCTTTTGGGAATTGAAAGAGTAGAGTGGCTGCATTTCTGCCAGTTTCTTTTCATGTGACAGAGGGCACAGGATAGCATAGACTGTGGAATGATGCCAGCATTTTGGAGGCCTCCAAGTGGTTTGTTACTCTGTATTTTCAATTCTGATGCCTTAGACACCACATGTAATATTTCTGTTGGTTTTTAAGCATAGTGAGCATTGGTGAGGTGTACCGAATGATCCATATACAAGATAGGGGTTCTTCACCCACTGGAGAAATTAGGGGACAACAAAATTCTGCTCTGTTCCCTCCTGGTAGCTGATTCCTTTCTTAAAAGAATTAAGCCTATCACAGTCTGCCCTGCTAGCTCTTGGCAGGCTGAGCTCTGGCTGTAAACATTTACACCTACCCTGAAAAAGCACCTCTGGAAGACCAGAGCCCAGATTACTGGGCTCATATTTGCAGTAGGTGGCAATGCTTATACAGTTTTCATATCACTTTTATCTTGCCATCTATACTAAACCATCCACTTAGTCGTAGGTCAGCAGACAGTCACCATGCAGGAAAGGCGGAGTGTCCTAAGTCAGAAATGGTATTAGATGATAATACGGAGGTAAAATGTTTTCTCTCTTGTGAACACCTGGTCATATGTTCCTTTATTTTTTTAATATCTGTGATAGTTAATTAGCAGTTAATTCACAGGTCTAGCAAGTGAACAGTATCTATTTGCTGTTTAATGATGCACTGTTTAAATTGATTTAAGGTGACAAAAACTGTGTCTCATAGAAAGTCAGTAAAAAAAACAACATGGAAAAGACCAATATACCATTGGAAAATCCAGTCCTCAAGGTCTAAACAGTGAGATTACCCTGCCATTACCAGTACGTACAGTATGTTTTAGAGAAACCGAACAACACAGCACACTGCTTTGGAACCTCAACCTCTAATAGTAGTAATTATCCAGCATGAAGGTATGTTCACGTTGCTTACAAGAGTTCAGGCAAACAGAAATAATAAATCATTATGAGCAACAAGATCCTAAGTTACACTGAGTCTGCAAGTTCCAAGTGGAGTCTAGAAGTAGGTTTTAGGGAGACAGTTAAAAAAATCATTTTGCAAAATACACTGTCTAACTCTTTGGTACCTCTTGTATTAGCGGGTATCAGCAACAGCTTCCTGTTTCTGGACAGGCTGTGTTTTAACAACTGATTCCTTAGAAAAACATTAACTGGAGCTGCAAAGAAATTTAATTAGTAGATGTCAGCTGAGTGGGTGGCTTCCTGTTTAGGGATTTCTCTAATTGTTTATTTCTACCCTGTTTTCTGATTTTCAGAAAATCCAAAAATGGCTTTTTGTCTTACTACAGTCGTCTTACTGTCTTACTACAGTTCAGAAGTCTAGTGCCTTTCCATGAAATTCGATGTTTCTTCTGATGCTTTCTAAATATCCACTTTAGAAAGTATTTGAGGGCTCCTCAGGAAACTTTACCAGCTCTTGTAAATGGACTGTGATTTTTGACCCTGCTGTAGGCAGTCATGGGAGAGTAGGAAAAGTTGATGACTTTATGTAATTTTAGTAAACTGATGAAGGATGCTTTCAATTACAAGACCTGAGTTGATAACTTCTAGGCCCCTGTCATTTGCTGTATTATTAAAATGACTGTGATCTTCATAGCAGTTACTCTCAGCCCAGGCTAAGAATAATCTTGCATGAGAATACTTTGGGAGAGTGGGAGTGCTGTCAGACATGAAAGCCTGTGCAGCTCCTTTTGCTACAGCAAAACTGACTGCTTCTGTATCTCATACTGACTCTTGGAAAGGTCTGTGTCCCAGTCACAGTGAGGTCCTGTGACTTGCGGCTAAATCTTAAATAGAGAAGAATAGATAAAATGCACTCTAAACAGTCCCTGTTGTTAGATGTATTTATTTTTTAGAACTCAGGAAGCAAACCAGAAACTGCAAGAAACTTTTCTTTAGAACCACCCAGTGCTTCTTAGAAATTTTCATCCAATTTCTCTCATAACAATCAGAAATACGGTAGGCATCCAGATGTCCTTCATTTCCCCTGCTCATAGCAAATTAGTTGGGTTCGGGGTAGAGTGCTCTCATTAAAGAAATGTCACTGAATGACTTTTCTCTGATCAGTGAGTGTGGCACCATCTTGCTGTTCCTACAGCTTGTTTATATTTCTTGCACTTCCAATTCAGTTGCCATTTTAGAGGGAAAATAAGTGTGCCCTTAATTGTATTCCAGGTGGACTTCTGATGTAGGCTGGACCAGTTGTGCACCATATTTCATTTTTCTCCCTTTTCTCTCTAGTATTCAAATGAGTCAAGTTAATTTGGTCTTGAACCCATGTAACTCCAGAACCTCTACAAAGGCTGCATTTCCTTCCCTCACCTTCAGTACACCTTTTCCATTCTTTTCAGAGGTCGCTGTTGCAAGATCCCTTTGTTTGGCAATAAAATAATCTTCTTTTGGTTCTGCGAGGTTATAGGATTGGTTCCTTCTTCTCTCAAGAAGGCAATTATACAAAGTTCCTTTTATTGTGTTGTAAAACAATGGTGCTCTGATTGCATTGATCCTGTCTTCAACTTAAGGAAGTGCAGTAATGCTGAATGTTTAAGGTCAGGATAATGTTACGAATGACAATGATAGTGTTGCTACAGATGTCTTTAGATCATCCAAACGGTGCACTGAAATTTACTCCTTACAAGATGTGTTCATGTCATCATGTCAGGACATCTCAAGGTTTTGCCATTGGACGCTCGTTTCTTGTGTCATTAGTAAGGCAGCCTGCCTCATATAGATAGGAGTGTAATTCTTGTCCCTTCCCTGGAAGATGGCTCCCAACATCCCTACAAACCATTTTACTGTCATCTGAAGTGCTTGTAAAGTGCTTTGGAGCTGTCCTGGACTTTGTATCTACTGGAGTTTACCTCTGCCTAGGTTGCTTCTGCAGTGTCATGTTGTAAATGAGCAGGAATAGAACTGTCAGCTCAGCGAGTTGAACCATACGCTTCAGGAGTTCAAGGTACCTGAATTTTTTAGTGACAGTCTTTCAGAAGGAGGCCACTTGAAGCACCATTCCTGTTTCTACAGTTTCCCTACACAGAGGCTTGTTGAAACTGTGCAGCTCTTATCAGTCCTCTACGTTCCGTGCTTCTGAAAAATGAAGATCATCTGTCAGGAAGCTTACATAAGGCAGGAACTCAAGATGGCATGCACCTAATGTGTGAATGTCATGCTAATAATCATAGGAGGGAAGTGGACGTTCACTCACTTGAGACATGTTATCTACATGCACGTTCATATGATAACCCACCCTTTCTTTCTCCTAGTCCAACTAGAAATTTCTTGGGAATTTCCGGAGCTGAGAAGAACCAGCTGCTATATGTTGGCCCTAAAGTCTAAAAAATCCTCAGAATCCTTAACTTACCAGGATGTATGCCCTTTGTATGGAACCATGGCATGGTGAACCCAGCAATAAAAAAACTTTCCCTAAACTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCTCTCTCTATGACACATTGCAATTTTGAGGGTTATCCTTTTTTCTATGGAAGACTATAAGCTTGGTAGAACAGTAACGTTCCATTATGTCTTTTGTTCTGTAGGAATCATATAGTAACTGTTCTTATGGACTTTTTAGTTTGTTATGCTTACCTGACCCAAGCTGTTGCTTCCTGCCTGGCGTTTTGTTAGGAATGTCAGGACTTAATCTCTTCGAATCGCTATTTTCTTGCCAGTGGAGACATACAACTCTACCTTGACTACAGGGAAATAGAATCAACAAAGTTAACTGGGATTACTAGAGTCTCATTATTAAAGTGATTTTCTCCTGCCAGATAAAAAATATCATCATACCTGCATGGAAACCTTCACTGGTCATTCTTTCAGTCATCCAAAGTCCTCTCCTCTGATGGTTCACTGTGAATAATTTCTTCAAAGTCTTGAATTACTTGATGAGTATGACACACAATACTTGTGTGATTCATATGGAAGTCCACCGTTTTCTGGATTTCAAGATTCTGTGAAAGAGCCAAATTTAGCTCCTGTCTGGCTCAGGAAGGAATATTGCAGAACTTCAGAACTTGTTGAAGCCACCCTTTCTTTACCTAAAAACATCTTTCATATGATACAAGTTTTCTGTCAAAAGTCTTTCTTTTTTCTTAAAATCAAGTTTTGTGTGAAAACTATGGTTTTTATATTGCTTTAGCCTGGAATGATCTTCAGAGATAGGAAGATAAAGTGCATGCAGTTCTGCTTAGAACATTTGTTTGGACTGTAAGAAATTGATACTGAAGACCCTTTCATGGTGATTTACCACTCGTGTTCAAAGGATGCAATTGGGCTGTAAAGTGGAGTTGCTCTATTTTTGGAGCCATTATTAATAACTGATAGCTTGATAAGGGCACAGTGTTCTTCCATTTCAGTAAACACGGGATAATAGGAAATGAGTATGGGGTTTCAAACATGCTGTGTAACACACCAAATACCAAGTTATCAGAATAAACTGTTATGAACTCTGGTTTTCCATTAGGAAATTTCTGAAAATCTTAGATTGTTTTGATCCAATGGAAAATAATGAGTTTTATAGTCTTGATTCTTGATTTTTCATCCTCTTTCAGAATAATAGTTTCCAGATGATTCTGTTCTGTATCGGAAGAGCAGGAAGAAGGGCAAACAACTGTTTATTTTCAAGTGTTCTTTCAAAGCAATTAACTTCTGACTTAGTTACAGCCTACCAAGCATTACTTTAAGACAGGAACACCTTTTCAGGATGTACTTCAGTTCCTAGCTTTGTTGTATTGCCTCCCAAGGCTCTTTCAAATTACTTAAAATATGTCTTTATTTCTCCGAGTGTCATTTATCTGTTTTAGAAATGCTTACCATCAGAGAGCTTTTGTCAGAAAGCCAAATGTGCTGCTCTGTATGCATCCCAACCTTATGCTTTAATCAATAAAGCATTTAAAACATATTATTGACAGGCATATTGCCAGGAAGATACCTAACTCAGTTACTAACAGTGAAACCAAGACCCCGCTTTAACTCTTTCTGTCAGTTCTGTGTTGCTGTATGAAATCACAGAAAATAGGGGAAGGAATCCCTGAGGTTATTCATGCATTCTCTTTCTCCCAAGGTCAGATCCTTTCATCCTGAGCTTTCGTCACTTTTATTCACTGAGTTTGTGAATGGTGTGCTCGTTCCTGTAAAAATCCTTTTTTTTTTTTTCCCTCATTTCTTTGCTGATGATAAAGTCTCAGACCTTATCCAGAATTCCTTCCAATACCTTCCATTGTTTTGCTTTTCCATTTTAAATGAAAGGATTTGCCCAAGGTCAAGACATAATGCCCTCTATCAGTGTTCAGAGTATTTCAGTTTTTCTTAAACGCAGCTTCTCTATTTAGAAAAGACAGCACAAACAAAATTAATAGTGCTGTTTTTAAGTGGCCAGAATGGACCCATCCAGTGTTTATAAAATACCTGATGCGATCTGTCAAGTGACAGTCCTTAAATTTGTGCTGTTCTCCTGAAGATGAATAGAAGTTTTCTGAAATGAGAACTGCAGGATTTGTGATTCACTGCGAGATTCACCTAGTCATTTCTTCACACATTCAGAATGTGGTAGTGCAGAATTCTCATCCTATTTTCATGCAAATAAAATTCTACCAATCATGAAATTGCAAGGAAATGAGGAGACAAGCATAACGGACTGAAGAATTCCACATCCTGCAAGTTACCCTTTCTGTCTCACCTTTTTCATTCCCTGAATATGAAGCTCTTTGAGTTTCTACTTCTTTCTGTTCACAGCTATTTGTTTCTTTCATTATGCTCTTCTGAATGCTTTTTCTCTACCCTTTCAGCATCACAGAGCATAATTTGCATGAGAATAACATAGTTCTGATTTAACTGAAAATTCAGTCATTTCAAGTGGTATGTTTAAGTTTCTCCTTGTGCTTGTTGTTCTTTGGGTCCCTCCTTCTATCCTGATCTCATATCATATACCGCACATACTGCCACTTGCAATAAAATTCTTTTTATGGAGGGCAGCACATATCCTCTATTCATTTCCTTCTTAGCCCAACCATGTATACCCTTGTATTAAAAGCAAGCTCAACTGTATAGTCAACAGCACATTTTCCTCCAAAACTGCCTTTCCTAAGTTAAGCCTTATTGTCTTCCAAGTTTCAGATTTAAAGAATTTGTTTACTGTTGGTTGGAATTTGAGTGGGATTTTGAGTGTTTTTTTTTTTTTTTTAATCTAGTTGGATAGTCTTTGTTAGGCATGGCTGTGCGGTTCACCTGCTTATACCACTGATACCATTACTCATAAAGCTGATTCCATAAGATTCCTCTATGTAACATAAATGTTAAGTGGAAGAGTGGGCTAAACAGAAATCCAGTATATATGTGGAATTGACATAGACACGTATTTGGTAGAGATTATGCTGTGATATCAACATGGAGTGAAAAGATAAGAGCACAGGTTACCTCTTAGCCAGGCTTTTTTCGGTGTGAAAGGAGGTAACACATTTTAGCATATAGTTAAGGGCTCATTTGATTTCACGTACTTTTTTGTTTTCAATTGAATGAATTTAGTGTTCTTGAAAGTGAGAGAGCCAGTTCCACTCAGCTGAGTGATCAGGCCTTCTCAAAGTAAAAAATCTGAAGTATGTATTTTTTTTCCTTCTTAAAAACTCACCCAATTCCTGGCCTTTGAGATTTTGCTTTAAAAATAAACTCATTTAAAATGTAAGACAGTACTAACTGACATCCTGAGTTCTCTGTCTAGAACCGGTTCTGCAATTTCATTTCTGCCTAGACCTACTACAAAATCTATTGGGAATCAGTGCAGGACATAAACCAAATGAGATAAGGATGCCAATTTGTACATTAACTACCTATCTGATGAACATTAATGGGCATTTTTAAGCTTTTCAGTATTCATTCTTACTAATTGCCAGACGTCTGGCTTTCTTCGAAAGGTATCTTTCATCTTTCCTCACTTGTTCAGAAATACAAGTTCTCCAATCTTGTACACGTTGCCTGGGGAATCAGTTTGTGTTTCACTACGGATTAAATGAGAACAAATCAACTCATATTTATGTGCTTTAGGATAGATAAGGATGTTATCACAGGGGCAGTTTACAACAGCTTTAGTTAGGGCGCTGCTGGGGAACAAATTGCCAGTAGGTTAACCCTGTTTGTCTTTCTACTAGGCAATATTAATTCACAGACATCTCATTAAGAAAAATCTACTCAAGGTAGTCCACATACTACTTCCTGGACAGGGTAAAACAGAGAGTACCTAAATCTACCAACCTGCTTGTAGTCTTTAGCTTTCAGTCACATTGAGATTGACTTGTTTATGTGTCTGAACCCTGAATTTAAGACAGTAATTCTGAGTATTAAGATACTGTGTTCAAGTCTTGTGCAATATTCAGTTCAAGTGTAGTGGTAGATACAGTTATGTTCTGAATATTATTACTCACTTATTCTGAGTATTATTACTCTGGGCAAGTAGCCTAGACAAAGCTGGGTAACCTACTTGAAGTTTGGAGTTCCAGACTGCTCCATGTGAATTGCTCTTTGGCTGACATAAACAATGACTCAAAATAATATCCTGTAATGTGGTACACATTTTGGGAGCATAGCCTGAGCAGTCTATTTCTGCTGACTCAGTGAGCTTTAGGCTACTGCAAGCAAATTCCAAATGAAGGGCGATGAACTGCTTTGCCTTGCACTATGGTCAGTGTTATCATTTTGCCAGTCTTAGGAACTAGGTAGGGAATATATGTCTCTTTGTGCCCTCCTTTCAGCTGTAGTTACTGCTTATCATTTCAGCCTCAAGAGTTTACAGAAATCTGGTGAACTTAGAAAAAATTTTTTGTTTTGAAGGACTGCTGTTTCTCCTTATCCCTTATCTGTCTTAAAGTCAGACATTACCCAGATTTATGTTTTCAGACATTAAACACCTCAGTGGTCTTTCAGATTTGAGAATCAGCACAAACCCATCTCTCCAAGTGGGGAGCAATTACCTTTAAACTAGTTACTAATTACTAACTAGTGAGAAAAGAGGGTATGTTCTTGTGGTGCCTTAACCAGCAGGCAGCTCAGCACTACACAGGTATTTACAGGCTCCCCCACACTGGGATGGTGAAGAGCATCAGAAATAGGTCTAAGTGCAAGAACTCATGGGTTGAGATAAGGACAGATAGGGCTTTTTAGATCCTGCTGACTGCGAGCTGCCATTCTGGGTAACTGAAAAGATCAGAGAACCACTTCTCTGTCCAAAGGAAACACCTCATTGCGAGAAGTTTGCTCTTCTTTTCATGCCTTGTGGAAAACGGGCTCTTTGGGAAAGAGCTGCATATTGATGAGAAAAAGGGAACTGACACTGATAGGTAGCGCAGTGTTTTTACCCTTTTAATACGCTGTGGGTATAACATACAATTAAGTTCATCCTCTGCCATGCAGAAATCCACGCAGCATTTCTCTGTCATGTCTTGTTCTTGATACTGTATAGATGTGCACTGGACTACACTGAAGAAGTGTTCTACACGGGTTGTTCTGAAAGTAATGTCTCCTATTTTATTATGTTGGCCAACAACATGAGAGCTGGATGTTGGTGGTGTGGCAGTAGGGGTTGAAGCTTCCAACCAACTTCCATTACATTTTGTTGCCATGCGATCGATGGCAGCGGAGGGTCAGCGTGACAAAATAGTGTCTGGCATGGAAGTGCAGTATGAAGCAAAGGTGTGTCACTGAATTCCTCCAGCAGAATAAATGGAACCCATTGACATACATTGATACTTGCTGAACGTTGGTAGGGATGACGGCAACAGTGGGTTACCTGTGCTGGTGCAGATGTTTACAAGCACAGAATGCGTGCTCTTGTCTATTTTTGGAGAAGATGTGCAGCTAAAAGTGGTGACTATATTGAAAAATAGATTTTTTTTGTAGCAGAGAATTTGCTCTATCGAATAGTGTTATTTGTGTCTGCTAGTGTTTTTTGTATCTGTTGTTGTTTCCATGGAAATAAATACAAGGCATTATTTTTGGGGCGACCTTCATACATTGCCTGGTGTCTTGGTAGCCTGCACAATGCACACTGTCTACAAAATAGCACTTCTGCTTTTAGGCAGTAAAAGGAAACACCCAAGTTCTATTCAACATCTTTTTCTGAGAGTTCTTTGTGACTGCCATCTGGCTCAGCCTTCTTGTGGGAGGAGCAGAATTACAGCATAGTTCTGTCTGAAATTTGAGTTCATCAGTTACCTTCTTACTTGCCCACCACTTATGTGCCACCCAAAGTTTTAGGTCTTAAAAAAATGGAACAAAGACGTTGTTACTTGTCCACTTCATTCCTTTTAGCCATTTACAGCATCTTTGGTTTTTTAAACCTGTTTGTCTTCTAAGAGAATCGTTTGAAAGTTGTATGTTAAGCAATTTTTTCTTCACACTGAACAACATACCAACTGCTTTGGCAGGTTGACTGAGTTTTGCATATATGTGCAGGTGTGTACCCACATTCCAGAGCTTATAGGATTAGTTGTTTATGTAGAATATAATTAGAGCCAACTCAAAACGATGGACTGTGTTTAGGACAAAACGGACGCATCTTCATCTGCTGTATGAAGCATTCTTGTATGAATCCTGTTGCATATTGTACTAATCTAAAGCACTCGCAGAGTGGATGAAAAAGAAGAAATTCTATTTTTTTTTCTGCAAAGTGTTACATTTGAGGAGGAATATTATATTGTCAGGGCAAAAATTAAATTAATATTGGGTAGTGTTGAGGATCTTAATTTTGGTACTAGTACTAGTAATTTCTGTACTATCTGTAGTGATAAAAACAATGGTGTTTAATGTTTCTCAGTCATGTGTGCTAATTTCAAAAGATATAAGAAATACTGTCTCTGTTTTACATGAAGAGACTAATATATCACAAAATTTCATGTGAGTACCAAGTAATTTGCCAAAGGTGACACAGCAGCTTATGGGAAACATAAGAAAAAATTAGATCTTTACTTTTGTGCTCCAACTTTCAGAACTTGAGCATATCAGAAATACACAAATATCAGATTCCAAAGAAGGAGGAGTCTGATACTGAGCAGACATGCATTCTGCTCTTGAATTTGACATGATGCTTGCTGTGTTCATGGTCCTACCCTTTTCCTTCTTCTCTTCTAGTACTCTTTATCAGAAATAAATAAAGTGAATTAAAAGTGAAACTGAGCTTTAGTCTCTATAGAATAGGTGAATCAGTCTTCTTGGTCCATAGATTCATGTAAGTGGAAAGGGACTTCTGTAGATCATCTGATCTGATCTCCTGCTCAAGGAAAGGCGAACTACACCCTATTGTTCACGGCCATGTGCAGCTGAATTTTGGATGTCTCCAATGACAGAGATTTCACAGCCTTCCTGGGTACCTGTTCTGATGTTTGACCACTCTCCTTGTGAACATTTTTTTCTTTATATCAAGTTGAAACTCCAGCTTAAATTTGTTGCTTCCACAGTCCCTGTGACCTGACCCACTCACCATACTCTAAACCAGTCTCTTCTTGATCCCTGTGGCCATAAGGATACTACAGAAAATCATGCCAAAGCACTTGCTAAATTTAAGATGAACAGCATCCACATCTCTGCCTTTATTCACAGAGCAAATCATGTCATTGTATAAGGTGATCCTGTTAGCCAGGCAAGGTTTGCCCTTAGTAAGCTGATTTTTAAGTATTCTCAAATCATTTTCTTGTCCTTCATGAGCTTGGAAATGGCTTCCATTATGATTTTTGACTTGAAGCTTACTGGTCTGAAGTTTCCCAGAGCCTCCCACATGCTCTTCTTTATGCTGTCTTCACCAGTCATCAGGAACCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAAAAGGTTCTGTAGACACTAAGACATATATTACTTTATAAGATTCAGATGTCTACCTTCTGCTCCACAAATATACGTAGATTTATTTTGTTTTGCACCGTATCTCAGTTTCTAAAGCTTGTTTTGAATTTTAGATGAAATTGATCCAAAATTTTAAAGTAGATGATAAATATTTCTAGATGTATCTGATTTTCAGTAATACTCTTGAAATCACATTACATTCTTTTGACTGTAAAGATAACATGAAACTAAAAAGATTGAAAGGAGATTTTGAATGACTTTATGAAATAACTGACATCTTCTAAAAACCAGATTTGAGTAGAGGCTTACGTTTTGAGTGCTTATATTTTACGTATTTCATAAAAAAATGAAATGGAGGTTATCAGAAATGTTCCCAAATCATGATAAATGTATTCAGTTTCAGGAATTTAATAGCATTCAAAGCCAAGTAAGTACTGTCTGATGTCAGATCTGTTTTGAAGGAAGTGACCAGGCTCTGTGACCTCCTTGTAAAGATTCTGCTTTAGTTCAAAAGATGCAGAACTAGAGCCTGGCCCTCATCTCTCTCTGCTAAACCCTTGCAGGCACTGGACTGACATATTATAGTACTGAATACCCATGTAACATCACCTGCTAACTTAGTAAACACGCTTAATCCAGTGCTGGAGGGCTGACAGTGCAAGGTTGTACTTTTTAATAGAATATTTGTTTTACTAGGATGTTTAGAAACAATGCATATCCAGTAGTGTAATGGACTATTGTTGAAGCAACAAATATTCTGATGTAGTAAAACATAGTTATGTTGCTAATGAATTTGATTTCTTCTTGTTTATCAATCCAGGGAGCATATATATGAGTCTGTTTCATTGTAAAGAGCTGACAGTGGAAAACAGAATATTTGCTGTCCCACAATGCCTTATATATGTAAATAGATTTCCTTTTATTTAGATCCCTGTTTCTGTCTGCATTTTCTGGTGGGAATTCAGTAAGGATATAAGTAGCTCTGTAAGTAAGGATATGAGCAGGATTTAAAATTCTAGTTAAGGTTAATAGTTAAAATGATGAGCTTTATCACAATTCAGAAGGAGACGATACTTCACCACTGTTTTGTCTTCCACTTCTTTTCTGCTCCTTCATCGTAAAAGAAAACATCGGAAAACCAGTGACCTGTAGGATCAATATCATTGTGAATCTAATCCTAATTTTGAACATCTCTTCCTTCCCTTCCATATAAGTATAGCATCTCCAGCATGGTAGCTCAGAAATAAGACATTTGCTTCTGCTCTGAAACTTGTGTTTGCATTTCAAATACATACTAAAGTTTGACAGAGATGGGAAGAATAGGTTGAAGTCATTTCTAACAGAAACACAAGTGGTGACGTACTTCGGTTTATGTTGCATATAGGCCTCAGCACTTCTATTTGATGTAGTTTGTAATACCTCTTTCCCACATTCTGCTATTTACATTTGTTTTCTTTTACCAATTTTTTTCTCGTGACCTCGAGTTTAAGGAATTTCATCAGTACATCTCTCTGATTATCCAAAATGTTAGGAGGCACTGTCACAAGTCCTCTCGCTCACTTAGATCTTCATTCTGTTAGAGTTCATCACGTATTAAAGTCAGACTCACCAGGAAAGTTGAAGGGTATTTATTCTTTTTGGTTTGTTTTACTAAATCTCTGTGAAAATAAGAAAAGCTGGCTTGATTCCCTCTATTTATACATAGAAATAACTCTTGTTCACTGGATGACCCTTACCCTATAGATCCAGTCATCCATGCCATGGGAAAAAAAAAAAAAAAAATTGTTGTGTCAATTCATTTTCACTGGATGTCATCCAGAAAGCAGAAATATTGCTACTCATGTTCATCTCTTGGTGATGAACTGCAATAAAGGACTCTTCATATGCCAGAGCTAATCTGCTAACATAAGATTTACTACTTGTTGCAGTGCCATGCCAAACGTACATCTTTAGCACTTTTGCCTGGTTTTTAACCTTAACTCCTTAACTCTTTACTCCTAGCTAGTCATTCTACCATTAAACTGTACCCAGTGAGGAAAAAAAAAACACACACTTCTAAATGATCTGAAACTTCTTCCTTTGGCATATGAAGATATGCACATACATTCATATACAAATGGAAGTGTCTTCATTTTACCAAAGAATTCTCCAAAGTGTAATGTCAGCCTCTAAAGCTATTAAATAGTCCTTCCAAGGGAAGTAAGTGAAAATCAGAATTGAAGCAGTTAGTTTTGGTTCCTGAAAGTCCTACCTAAATGGTCTGTGCTCATGCAAAATGGCCCATTCATTTTGTTGGAGAGCGCAGGTAAGCAAGGACTCGGCCTGAAAATAAAGATGTGCAGACTCAGCTCCTTCTTTAGAAATCTGTTGCAAAAACATGGCAGTCCACTTACTGACTGTGCTTTCTGATAGTTGTGTGCAAATTCATTTGTATACTGATTATTTTTTCTATATGATGTTATTATACAGCATATATGGTATAAATGTGTACATATCTAGTACAGCATGAATGAATGTATATGGACAGCAAAGTTTTGTCCCATGCTGTTAATGCATGTGTGCCCCCTACCCCTTGATTTTAGCCTGGGTCATCAGTGCCAGCAGCTTATTCCAAAACTAATACATAGGTCTGTGCTTGTTCAAAATTAGAAACAAATTTATTTTGTTTTACTTAGAAGCAGGGAAGTCCCTCCAGAGGTACAGTCACCTTGAGGGTATTAGCCGAGGCTACTTTGAAACAAAAATGCTTTAGTACCAGTCAGTTTAAAGATAAAGCCTTTTCTGTTCTGTGTAAACAATTTTTGATCAGCCCACTGTTCTAAGGCAGTTCCTTATTAGCATATCCTATAGCGTATTGTGAGACCCCGTCTACAGAGTACAATTGTGACACAGGCTGTGAATATTCAGCAATAAGAGTCTGTAAATCTGAGTAGGTAGTGACAAAGCCTCTTCAGGGAAAGCCAAAATGAGGTGAACTGTGTAGAATAATGGCATCTTGGGGGGAGCAGGGAGACTATTTTAATTTAATCAAAGCCAGAGCAACTGAAAAAGATACTATTAAAAGGACTTACTCTCTGAAGTAAATACTTTTCAGATAAATTCAGAGTTCAAACTGACGTGCTAAATTGGCATCCTTGCATCCAGGCTATTCTCTGGATCAAAGCAAAGCTAATTGTTTCACTTGCCTTTTATCTATTTTATGGATGTGTGTGTGGGTATGCATGTGTATGTGTGTGTAAGGTTTACGCATGTGCTCACACAAGTCACAGAGAATAATGGCATCGAGGGAGAGTTCTCCGCTTTTTTTTGTGTGTGTGTGTGATGAAGTTGAAGATTCTTTTTCTTAATGTGGTGGTACCTAATAGCCATTGCCCACTGTTGTAAAAGCTAAGAAGTACTGCATCTTTCCCTTGCCTGTGTTTGCCCAGCCACCCTTCTACATACTACAAGCACTGGGAAATTTCAATGACACAGCTTGGAATGGGTTCAGTGACCTCAATTATGCCCTCCCACCCACTCCAAACTCCTTTCAATTTGCAAAAAGCTTTAAGTGGACAAAACCCAGATGCCTTTTGCTTGTAGTTCAGTAAGAACAGATTGGGCATGTAGATTCTTGTCAAAGTGATATATGTAGTTCATTTTCCATTAACTCTTTCTTAACTAAGGATTTAAAAGTCTCGGTTCCGTGTCTAGCACTCTGCTTTGCTTTCTACTGCTTTTTAAAGTTCATTATGCCTACAACATCCTTTAAAAAAATGAACCTTAAAAAGCCTTGGCTAGACATTGACTGATATGAAACAGACTGAATGTTTGGTTCTGCTTTTAAAGGCAATCACTTTTTTTTTTTCTTAAACTTGTTTCATATGTAATAACCCATCCTATCACCTAAGACAGTTCAAAAGCACTAGCTAAATATAATAAATAAAAACACCAGTTTGGAGGGAGAAAGAAAATGTGACTTGTGGAAATGATTTACCAGTCAAAACAAGTATGTGGGCCCTGATGACCTTGAGAGCTTGCTTGAGTTGGCTTGCTTATAACTTAGACTGCTTTCATAATATTGTAATATTGCCCCAAAGAGTTGGTGCCTCTCCCCTCCCCCAGAACATTTCATTACACTCCCTTTCTCCCCCCTCTCTCTCTCTCTTTCTCTTTCATTCTGCAG
Seq C2 exon
AAACATGTGCTGTCAATAATGGAGGCTGTGATCGGACTTGCAAGGATACCGCGACAGGGGTACGATGCAGTTGCCCAGTTGGATTTACCCTGCAGCCTGATGGGAAAACGTGCAAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000014178:ENSGALT00000022933:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF146701=FXa_inhibition=WD(100=90.0)
A:
NA
C2:
PF146701=FXa_inhibition=WD(100=90.0)
Main Inclusion Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]