GgaINT0125237 @ galGal3
Intron Retention
Gene
ENSGALG00000008736 | PNPLA7
Description
NA
Coordinates
chr17:2056159-2068689:+
Coord C1 exon
chr17:2056159-2056277
Coord A exon
chr17:2056278-2068532
Coord C2 exon
chr17:2068533-2068689
Length
12255 bp
Sequences
Splice sites
5' ss Seq
CAGGTAGGT
5' ss Score
10.28
3' ss Seq
TCTTTTTCTTCTCTGCACAGGGG
3' ss Score
10.51
Exon sequences
Seq C1 exon
ATAGAGATGTATGAACGTGTGTTCCAGAAGCCACCAGACCGCCACTCGGACTTCTCTCGCCTGGCTCGTGTCCTGACTGGAAATGCCATTGCCCTGGTCCTTGGTGGTGGGGGAGCCAG
Seq A exon
GTAGGTCCCAGAATGTTCTCTGGTGTCGACTGCCAAAGGTCCCAGCCTGCTGCTGTGTGTCCTGTGGCGTGTCCTGGACATGTGGATGCGTTGCTGTGGAGTCCCAGAGCAGCACTGTTGCAGAGTTGTGATTAGATCAGAATAACAGGCATCCTATAAAATCTGCACTGTTCCATAAATAACGTTCTGGAGAGAGGCTGAGGAGATGTTTTTCTTATTCAAACATAATTGGGTGGATTTTTGTTTGGATTTCTGTGGAAGGAACACAAGTAGGAACGTGAGTGTTTGGTACTGAGTATTTGTTATGAGCCCTCTCATATATTGGGCATAGTGCCAGGAGATGATGAGGGTAAATGTGACCCTTCTTTCTTATTCTGGCCTACACTATGGGTTTTTCCCAATGGATTCTTGCATTAAAAAGTGGCTCATGATATTTCCAAGGCCCTCAAAGCTTTTCAAAGTCTAGACAGCCAGAGGAATTACATTCTCTGATGTGAGAATGTTCTCCTCTTTAAAATGATGTGATACCTCAGGTACATGTATGCTTCTCACAGCCCTGCTTCCCTGGAAGCGTGTGTGTCTGCAGACACCAAGGTAGGACATGTGCTGAACACTCCGATTAGGATTCCAACTGAGTTACAAGTGAGCTTTGGAAATGCATTATTACCAGTGGCTTTCTTTGGAATTCCTTTCAACTTTGAGACTTTTCTGTTGAGAAAGATGTAGAATTTAGTATTCAAGAGGGAACCAACTTCATTATCTTCATCACCATGTCCTTGCCCTTCTTTAAAACAGTGCTTTGAAATACTGCTCTCAAATATAAATACAAATACATATATTGCATATTTGATTCAAATCCATGAAGATACCACATTTTTGTCTTGGTACCACCACGTGCTTTGGGGAGGGAATATTCCCTATAAGTAAAGGTTAGAACTCCTTTGTGACAGCTTGTTCTGATTAGTCACTTGATGCTGAGACAGCCAGTGCTTTGCTTTGGCTGTTTCTTCGAGTGTCTGTAAAGATGCCTTTATCCTGGTTGCTTTCACAGTTTCCTCACCCAAGATGATTTCAGTATTTCATTTCTGAGATAAACACTATCCTATGGAGGCACAAGATAAAGCAGAGGAAGGGAGCTTATACTTAATCTGTGTGTCTCAGTAGATTTCTTATCAACTGATCATAAAGCACTGGGTTTCTTGTGGGTTTTTTTGGTTGTGTTGTTTTGTTTTGTCACTAGCTATCTGAGATCTCTCTTTACTGAAGCCTATGCTATGCTAAAATACACGTACTGTATCTTTCTGGCAGCACATTTTGCTTATTCCCTTCCTTTCTTCCTTCTGTAAACACTGCTGTAGTTTTTGCTGAACTGTTTTTTTTTTTGTTCTACTGCTTAATTTGCAAGCTACCACCTGTTGGTGTTCGAGAGCAGGGGTAAGAGCAGGCTTGTTAGAGCCTGTTTGTTGGTCCTGTGTTGTCTTCTTCCCCAAATCTGAGGCACTGCACAGCTGCTGCGTTCAGCTTTTCTGGATGCAGTCACCTATTCAACAATGTGCTCACGTCTCATCAGCCATTAATTTGTCCATCTCTGCATCTGTGCAGTATGGAAGACTTTAAGAGGGTAAAATGGCAGACAGTGGGTAAATGTGATGCTTCCTTCTTGTTCTAACATCCTTTCTTACATTTCATGGCCCAAGAAGCTCTCTTTTTCTGAGAGCTCATGCTGGTGGCACATGGATGGTGGGAGCATTGTGTTTTTCAACAGAAAGGTTCCTGCATGCTATTTCTGTAGCTGGATTGTCATCAAAATCGTGGTTGGATGAAAGACTGATTTTTTTGTTGTTTAATTTGTTTTCCAAGAGAGAGTACAGTTCAGACTCTTGGGAAAGGATAGAGTTATTCTGAGCTCTGTACAAATCTGCCTTTGAAAGCTTTGCAGGCCAAAGGTCTTAGAAGGGGCAAGAGATTGTGCATTGGGTACTGGAAATCATCCTCTGATTAAGGCCTGCCTGACTAAAACCAGCATGACGAGTGGCTGCTCAGACTCCTGCTATTCAGTGTAGCCTTTGGATAGTGCTCTACATGAAGTAACCTCTTGCATTGCCCTGGAAGCATGAGTCATACTGGGCTCAGAAACAGCATAGGGCGCTGGCTGGCCCTTTCAGTGGGAGGTGCTGTGCTCTGTGGCTCCAGTAATATCAATTATTTGGTTGTTATTTCTGGAATGTTTGTCTGGCTTCCCAGTGACAGTCAGTTCGGGAGGTTTTACCCAGGCAGCTTCCTAGTCATTATCTTAGGTTTGTCATGACAAAAGGCGCGTAGGAACTGAGGGTTTTCTTTCTCTTGTGAAGTTAAAAATATAACAAATCCAAGTGATACAGTTCTGAAATTACAGTGTTTTGCTGTAGTGAAGTGCTCACTTAATTTCAGCGAGAATCGCCGAGGAGTTTGGGGGAAGGAAGAGAGATTTGAGTTTAGAAAAATAATACCTTTGAAATGTAGTTGCGAGAATAATGACACAGCAAACCCTGCAATAAAGGCACGAACCTCCCATACGTCACCGCCGTGAACCTCAGCCATCCCACACACAGCCCACCCTTCCTTTGGCTTTCCGTAGCTGTCTTAGCAGAGCTGTTGGAAAGCTAACATTTACGGGCAGTAAATACTCAATAGAGAAGTGTCGGAGAGTCCCTGGGGCTGTGGAGAAAAACAATTGGTCGTGATGTTGCAGAAGGCTGACTGACACTGCATGGTGATGACAAGCCTTGTTGTTGATGATAATGTCATTCTTGTAGGAGTTAATTTGCTCCAATGCGCCGATTCTGAGTAAGACACATTAGGAAAATACAGAGCATTAAACGCATTTGTTTGGGTATTTTGATGAGTGCTGTGCAATACAAACACACCATGCGCATCAGAGATGCTGCAAGCACTTTCTTGCCTTTTCTGGGTGCTGTGCCTGATGTGATGAGCTGTGCTGGGTGCTGCTGCCTTCCCCTACCTGCACACGTGCAGCCCATGTCCCGCTGCTGTCCCGGCTCCACAGTGCTCTGCTTCTCCATTCCTTCCAGCACTTTCCTTCAGGCAGAGAATGGCAGCCTCCTCTGAGAGCTGCTGCTGGAAGGTGTTTCTAGGTATTTATTTCATCTCTTCTCTTTTCCCCACTCAGTTTTCTCCCCAGCAAAAGACTCAGAGCTCTTGGAATGGGTCCAGAGGAGGGCCACTAAGATGATCAGAGGGCTGGAGCACCTCTCCTGTGAGGAAAGGTTGAGGGAACTGGGCTTGTTCAGCTTGGAGAAGAGAAGAATGGAGACCTCATTGTGGCCTTCCAATACTTGAAGGGAGCATATAAACAGGAGGGGGAATGGCTGTTTATGAGGGTGGATGGTGATAGGACAAGGGGGAATGGTTTTAAACTGAGACGGGGAGGTTTAGGTTGGATGTTAGGAGGAAGGTTTTCACCCAGAGGGTGGTGACGACTGGAACAGGTTGCCCAAGGAGGTGTGGATGCCCCATCCCTGCAGGCATTCAAGGCCAGGCTGGATGTGGCTCTGGGCAGCCTGGTCTGGTGGTTGGCGACCCTGCACATAGCAGGGGGTTGGAACTGGATGAGCATTGTGGTCCTTTTCAACCCAGGCCATTCTAGTATTCTATTACATGATTTTGCCTCAGTTCTTGAGAAGTAAGGTAGATTTCTCCCATCCCCTCCCCCCCTCCCCCCACTTGTCCTAGCAATCTCTAAGGGTTTGACTAATTGCTGCCTTTTCATTTTGGGCAGTTGGCCTATTTAATCAACTTCTTTCTGCCTTTTCTTCTTTATTTTCAGCACTGGTCCTCTGGAAAAGGGAGGATAAAAGCAGCCCAGGAGCAGCACGTTATGCCTTCCTTGTTATGGGCTTGCTCGTGTCTGAACCTCTTCTTCCTCATCTCCTTCCCTGTGTCCCCAAGGCACTGAGTGCCCAGACCCCGTGCTTTTGGAGGCCGGGTGCTGCCTGGTGACTGCTTGGTGCTGAGCCTCGCTTGGACCTCTGTGCTCCTTAGAGCTGGGTTTGTTTTTCCTATTCAGGGACTTTAACCAGTGATCCAAAGATAGAGAGGGTGCCTGAGTGGCAAATCTCATCATCCTTTTGCTCTGAGGAAACCACATTTTCCTCTGTACCCTCAGTGCCTGACTCCAAGATCCCAACCTCTACAAAGAATAAAATCAGGAGGCTTTACTGTCTCCATACTCCTCACATTTGGCTGTAACTGTGATTCACTCAGAGCTGTGTAAGCCCTTTAGCAACAGGGATCTGCTCTGGGCTGCTGTGTTTTGCTCCATAGCCCACAGAAGCAGAGAGAAGTGTTGTCCATTAGTTCCCAAGCTCGGTGGGTTTTGTTGGGCGTAACAGAAGTGAAGGCTCCTGGGTGCGAAGCAGTGGTGGAGCTGATAGGTACATCCCAGCCTTCAGGATGTGCCGAAATGTCTGCTGTGGTGGGGGAAGCCTGGAGTTGGAGGTGATGTACCTTTAGTGAGGTGCAGTCCTCAGGGTTGGGTGTTTTGCTTGCAAAATGCAGACAGCACTCATTTCTCGCAGTGACCTCCTCGCTGTGGTGCACGTGAGGGCAGCGGTGTGGTTATTTAACCCTGACGTTCAACTTCAGGTAGGAACAGAGTCTCCAGGGGAGACTGCATCAAGTTTTTATGGTGCAGGTGCTTCAGATGCAGTTCGGGCAGTTAAGGAAGATGAATTCTTATTCCTCAGCTAAGACTGATAACTGATGGTAAGAGGCTCCTTAGCCAGATCAGTGGAAGGAGTCTGTGTGCAGAAATCCTTCAATACCAGCACTGCAGAGTGCAGCACTGGAAGTGGAGATGTGGGCTCAGGAGATCAATGTCTGCGCCACAGAGAGAAGACAGGAGCTGGAGTTGCCTTTTTGAACAGTCCTCCGTGACCACGAGCACCCAGATGGCAAATGTGTGCCTGGGGAGTGATGGGAGGCAGAGGGGAAGGATTCACTGCCTGAATTCTGAAGCTGTCTCCAGAGATGTGTGCTGAAAACACAGTTATAGAGAGCACAGAGGGGTGCTTTCCTCTATGGGCTTCTAGGTGGATCCACTATAGCGGTTACAGAGGGATGAAGGAAAATCCCCCGGGCATTTCCTCGACTCCCAGCATTCCTCATATACATCAGAATGCAGGAAATACTTTTCGGAGCCTTTGCTGTGTTCAAAACTTGACATAAATGGAGACCAGTGGGAGCACCCCTGGGTATGAGGCACACAGGGATTGAGGGAACCCAAATGTGTTGGTATCACCGCGTCCTCACACTGCAGAATAGAAGCACTGTTCATCTTAAGTTGATTAATTATGCCTCCTCCAAGCTTCCATTCCTATCTAGGTCCCCTCATCCTTTCTCTTGTCTTTGTTAGTCTGTAAGCGTGTTTCCTGTTCAGATATACCCAAGCCCTGAGATTAACCTTTGCATCCTTTCATCCTGCTATCATTCCTGCCTGTTTGCCTTATATCTGCCCTTCTTTTCCTCTCCCAGGATTTAATTTCAAATCCTCTCTCAAAGGAGCTATTAAAAAAAAAAAAAAACAAGAAAGAAAGAAGAAATAGTTTACCAACTGCTGCTCCCATACCGGGACATGTCCTTATTTGTCATCAACAGGCACTGCTTGGCTTTGGAGTAATTCCCCCTGGATCACACAGTGTGCTTTGGGACTGCGCTGCCTTTTGCAAAGAGGTGATTGATGGCAGTGCTTGGGGTTGCACTCAGTGCTTTATAACGGGGTGCAGGTGTGCCCTGCATTTGTCAGCCATCTCACTGTGTTTAGAATTCACGGTCAACGGAGGGCCAGCAGCTTGAGAAATGTATAAAAATGGTATTCCCACTCTTGGAGATATGAAAATAATATATCCTGATGAAAAGAATTGTTCTGAAGGAGGTTATGAAACAAAATTGCTGATGATAGAATCATTTGTTCTTCATTCTGACCTTGGTTAGGATGACTCCAGAAAGCACCAACAGCCTCTGGTGCCCACAGTGCCATGAATTACTGCAGCCATGGAGGGCAGGCACTGCAGCACGGAATGGGGATTCTCTCTGCTTTGCTCAGCTCCTGCCCTGGGGTAGGGTTGGGCAAATACCTGCAGTGCTTGTGGTGAGCTGTAGAACGAGGCTGCTGCATCTCAGCTTCAGCATCAGCACAGGTCAACCTCTATAGAATGCTCTGAAGCACTTACAGAAGTTTAAACTGTTATCACTATGAAATCTGGGGGCTTTAGCAGGACGTTGTGCTCCCTGAATGTGCGTTCAGCAGTGAGCTGAATGTGTCTGGGCAGTGTGCTTGAAACCTGACATCCAACCCAAGTATTCTGACTAAGTTAACTCTTTATTGCAGTGGTTTAGGAGCAACCAGGTAATCCTGTGTGCGATGTCTGCTTACAGAGCCAAAGCCCACGTGTTCCCCAGGGCTGCTGAGGTTTGAGGGCACCCTCGCCTGGTTTGGCTGCAAAGAGCCCAGTAGTCCCCAGGAAATCCATTGTGGTGCCACTGCTAAATGAAACTGAAATATGAAAGAGGTCTGAAAAATGCTTCTCTCCTTCTTCTAAACCAAAGAATAAAACTGCAGCATTTACAGTCTGTTAGCAGCCAGTAATGATTATGAAGCAAGATTTCCACGGTATTGAAGCGTCAGAATGATCTGAAGGAGGCTGACTCTGCTTCATGTCAGGAAAAGAGCTGAATGCTTGAGATATCCTTGCCCTGGTTCCCTTTCTTCAAAGTAATCCCTTTGTATACTGAGCCCAACCTCAGCCTTGTGGTATTTGCAAGGGCAGGAAGTTAGTGACTCCGGGTTAATCCCCATGGCCTTTGCATTTGTCAGCCCACAGCTCCTGCTCTCCTTCCAGCACAGCCAGCTCACTGCCATGGGGTGCGTTTGGTGGAAGAGAAGCTCTGTGATAACCTGCATTACGTCCGTGTGCTCCTAGCTAGACATCTGTATCTCAGTATTAGAGCTGTGATTGTTCTTTCTTGTATCTCTCTTTCAAGCTCAGATAGATGTATGGGGCTTCAGAGCCTGTCATTGCTGGAGAAGTGGCTTTATGCCCTGTGTCTGTGCTCCTGGGGTGTGCAGAGGATCCATTGCCACGTCTGAGTGAGCCAGACCCAAAAATGAAAACCAAATTCCAGTGTCAGCCATGCGGTGAGGTGCCTGGATTCCCAGAGTCATTCAAACAGCAGATATGGTTCTAGGGCGATGGCTGGGGGCTGAAATAGTGGTGAAGGATTTCAAGTCTTTATCCTTAAAGATAGAATTAGACCTGGGTGTTCTGTTGGTGCTGTTTCCTATAGTCTGATGGGGGGTGATAAGGAGCCTAGGGTCTTCCTTGGAAACAAAGATGGTAACTTATGTTTGGATTCCTAATTTGAGTGACCCAGATCAGCCCTGGAGTGCACTGTTTGAACAAAGCCCATCTCCTAAAAACGAAGCACTGAGGTTAGTATTTGCCTTAGCTCAGAAAATCTCATGAGATGTGGTCATGAACTGAAGGCTTCAGGCCCTTCTGTTTGCAGATGCTCAGTAATGAACTGCAGAGTGATTGCTCCTAAGGGGCTCTGCTTCGGTGTCTTTGGGGATGGTGCATCCCGTGCATTGCCTTGTGCATCGTTTTGAAATTCTGGCTGAAGATTGATCTGCAGTTAGTGTGCAGGGGGGACAAGGTTGGGAGCAGAAGAAATTGGAATGTCACCATGAGGAGGTGGTTGCAAAAGCTTCCCTTGGGGCAGCTGCTGCAAAGGAGCGTGTTGGGATGAGGACCAGGTAATGAGGGCTTATTCCCCTCAAGTCAGCTTAGATGTGGGACTTCATTCTTAAATGTTATCCTGAATGGAAACTTCCTGGTAAGTGTGTGAGGAGCTCAGCAGGAGTGCAGTGTGGTTCCTGTCACCACTTTGAGCTGAAAGCACTGTAGTTCTTCAGGCAAGTGTATGATGCTGGGCAGCCTTACGGTCATGGAACCTAGGAAATAGTGTTGGAAAGGTACACACGTGTCTAGATTTCCAAGCCTTGTTTGTGTGTGGTGTTGCACTGCAGAAGATTAAAGGTGCCATATTGGAGGTGGTCCCCCTTCACCATGCACAAGACTTGCTTCGTTTCTCAGTCTGGAATGGAAGCCCTGTGTGACCTGAGCTGCTTGCTCTGCTGTCTGTCCCTGCAGTGCAGGTCGGGGCAGCACGATCTGTTCTGCAGCTTCACCACCCCGTAGTCATGCTCAGAAAATGACAGCTCTGCATGCTTGTGGAACTACGTTCCGTGTTGTTGGTGGGAAAGAATATTGGTGCACCATCTCTGCTTTGTAACTGATCATTTTTTCTTCAGCCCCCTGACCAGAGTGTGGAGGCCAGCCTGTATTCCTACAGACAGCATACTCTGAAATGTCCTGCTGCATTTGCTGCCTTTTTCAGTGGGTCGTATCTAATGAGAGCTCTGGCAGCACACACAGAGCAGACACATCACTGCTCTCAGAAGAGTTCTTCTTTTATCAGTTGAGCTCTGGCCTCCGTGCAGCAGAGTTGCATGCCAGCAGCATCTCCCCAGGAGATGAAAACAGGGGTTTGTTTCAGGAGCAGGATTTTTGCTGCAAGAGCTCCTGCCAGAAGGGCTGTGCTCTGATTGCCTTGCTGCCTTGTTCAAGAAAGCACATCTTCAGCCCCCACATTCTCCCTTTGCTTTGTGATCGTTTATTTGTAATTATTAACAGAAAAGAAGAAAGGGTGCTTGGAATTTAGGAAGTATGGGACACCTTTTGGAGGCTTCTTAAGCACAAGTAGGATGAGTTTGGTAAGCAGTGCAGTAAGTGGCCAAAGAAGAGAGTGGATGCAGAGAGCAGTCCCTAATTTGCCTTGCTCAGGTGAGGTTGCAGGGTAGTAATGGCAGTGGCAGCAGAGTGGGGCTCCTGTTTCACTTCCTCCTTGACCTGGTGGGTGCCATTTCTGCTCTCAGTGAAGGGCACAAGTTAGCCAAGCTAACTTCAATCACTGAAGGAGTGATATACAATAGAAAGGAATTCTTGTTTATATATAGTCTGAGCTTTTCTGGAGCACTAGGCAATACTTTGGGTTCTGTTGCATGTTATTTGAAAGTCATCTTTAGGTCATTTGTCCTTGGTGCAAGGGGTCCTTGTCCTTAACCCTGCCAGGAGGTGCTCTCAGCACTGGGCAGCAGCACAGCATGCATTCCTCCATCTGATCTCCCTCCCCATTTCCAGCTGGACTCTGTTCTTCCTCCTGACCTCCGTTCCTGGGATTCTGGGCTCTTGTGCCAGAGATTTTCCAGCCCCTTTCTCCATTCTTCCCAGTCCTCTGGCATTGCTGCATCCGTACAGCTTCACCACGAGCAACCTTTGTACTGCGTGTGCCAAACACTTGCATCTTCACATGTCGCCCCGAAACAGGACAAGTCCCCTGTGAAGTTGTGCCTGGTATTACAAGAAGCACACGATCCTTGTTTCTTCTGCCCCAGTACCCAGGCTGTTAGCAGGGACGTAGCTCCTGAATTTCCTTCCTTCTCCAGTTGCTGTGGCTGTGTGAGGCAGTGGTGGGCTGTCACCAAGAGGGCTGTGTGCAGCCTGGCACAGCTCCTGCCCAGGAATGCTGCTTTCTTTGGCAGTGTGCCTGTGTTTGTGGATGCTGCAAGCTGGGGAGAAGAGGACAAGAAAGGCTCCAACTGCGACAGGTTGGTGCAAAGTCGCATGTAGTGTTGTTGCTGGGAGTAGTGATGGCCTAAAGGTGCAAAGAGAGGGAGAAATGTTTAGGAAGTCATCTTCCAGCAGGCTGGAGGTACGTAGAGAAATGGAGTGGGTTTGGACATGCTCACTTTTCTGAAGTGTCTGAGTTTACACAAGCATGTTTCATCTTGAAGATGTTCAGGATGCTGGAACTGGGGGAATCAGTTTTGCAACCTTGTGTAAGCAGTCAGAGTCATAGAATGGCTTTGGTTGGAAGGGACCTTGAAGGGTCATCCAGTTCCAACAGCCCTGCCTAAGGCCTATGGCAGGGTTGCCAACCACAGGTCAGGCTTCCCAGGATCCCACCCAGCCTGGCCTTAAGTACTTCCAGAGATGCAGCACCCACAGCTCTGGGCATCCCATTCCATGCTTCACTGCCTCTGAGTAAAAAATTCCTTCCTAACATCTAACCTAAATCTCCCCTCTGTTAGTTTAAAGCCATTCCCCTTTGCCCTATCACTGTCCAACTGTGTAAAAAATTGGTCCTCCTCCTGCCTGTAAGCTCCCTTCAGGTACTGAAGGGCTGCAATGAGGTCTCCCTGGAGCCTTCTCCAATCTAAATAAGCCCAAAGCCAATAACCAGAACAAGTCAATAGGAGATCCCTTTCAGAGCAAACAAAGTGCTTTCATTTCTATCTTATTGGTCAGCGCACTGAAAGCAGTCCGTGCTTTGGAGATGAGGAGCTGATGCACACTTGGCTGGGAGGTGGAAATATCCCCAGGGACTTTGCCTGTACAGGGCAGGGAGATGATGGTTTGCCAATAGAAGCAGCAGTAATCTTTTGTGATTCGTTCAAGGGCATCATACAGTGAAACAAAACCAAACCCAGTGTGATCACATCAAATCCTCGTTTTCTGGATGCATGAATGTGTAGATGAGGAGATCCTATTTTGGGAAAGGTTCAAGGGAGGCAATCCAGGGTGAAGCTAGTCCTGACCAGCCTAAAATCACACTCTGAGCAGGAAATGCTTTATGGTAATGAATGTGTGGAAATGAATCCATGCAATGCAGGCGCTCTCCAGAAAGCAGGTCTGGTGGCACAGGGGCTGCTCCTCAGCATAGTGTCAGTATCAGAGTGTCCTTCATCCCTGAAGGCATCCGAGGCCTGGTTGGGTGGGATCCTGGGCAGCCTGAGCTGGTGGGGGGCAGCCAGCCCACGGCAGGGGATGGAGCTGAGGTTCCTTCCAACCTATGAGAAGAAACAATAGGAAAGCAGCAGGAGAATTCAGGGAGGAAAACAAGATGAGTTACTCTCAGCTCCTGCTTTACACCAGTGCAGATCTGTCACTGAAGTCATTTACACCGGTACAACTGAGAACCTGCCTCAAAGCTTGTCAGCAGCTGAAGGGGATTTATTTTAGATGGAAAGAATGTGTTCGGCATAGCTTGGCCAAATGACACCTACAGTGGACTTGGCAGCTGTTAGCAAGTATTTATGGGATGTAAACAGCAAAGGGAAAAAGGACGGAAATAGAGCGAGCTGCAGGGGAGTGGAAAAATGGGATGAAGGTGGGGAAAGGAAGTTTGTACAGCTGTGTGGCTGAGGCTGCAAAGAGTCCGTGCAGGTGAGCTGAGCGAGCTGATGTGTTGGCATTACCTGCACACAGCACCGAGGCTTTCTGTGCTTAGTTGCTGACAGCCCCATAACTCTGATTCGTGCAGCCTACATTTAAATCCAGTTGTGATTTGACTCCTTTGGCATGTGGGCACAGTGGGTTCCCCAGTTTGTGTTATGTGTCTGTGTGTAAATCCTTCCCATAACGCCAGCCTTTCCATGCAGTGACCTCACCAGGTAGCCCCATGTCCCCCCGCTCGGAGATGCTTTGCTATTTTTTTTCTTCTTATCCCATCAAAGTTCATCTGTCTTATCACCAGTGTCCATCATTGCTCTAAGGTCCTTCTGCCACTGTTGATGTCAAGGAGGATTTTAGATTTACTGTCCCAAAGGACTTGGGATCATCCTCTAACACTGCCTCCTCATCTGCCTCTTGTCTGTGTGCTGAATGGAATTGCTTCTTTCTGATAACTGCTTGTCTCTGTTTGCTCTGCTTTCCATCTTCAAATCCATGGTTAGTCCATGTGCTGAGCCATCCCATCACCACAGTCTGGCTGAGGTTCTTGATTCTTCTTCCAGTGATTCTTCTTTCCCAAAGGTCTCTGGAATGCACCCATCCAGTGCTCCAGAACAGCCCTGGTAGGCATTGGATGCAGTGCTCTCTTGAAGCCATGCTGACTCTTCCCTCCATGGTTTACCTCCTGGCTGTTCCCGTGTTGCTGTCCTTCACACTGAAATCAGGGAGACTTTTTTGAAGCCTTCTGCTGTCATTCTGCATTTCCTGTGTCTGGCTCTTGTTTAGCAATGGAATGGCAGTTCAGCTGGCGTACATTCAGGCCCCTTTAGAAGGCAGCATTGATGTGTTCTTGGTTTCTCAGTGGCTGTTTGTCTGATAATGTGTCTTTTTCTTCTCTGCACAG
Seq C2 exon
GGGGTGCTCCCAGGTCGGGCTTATCAGGGCGCTGATTGAAGCTGGCATCCCCGTGGATATGATTGGAGGAACGTCCATCGGCGCTTTCATGAGCGCTCTGTACGCAGAAGAACGCAGCTACAATCAGATGAGGATCAAAGCCAGGCAGTGGGCCATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000008736:ENSGALT00000014216:28
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0173417=Patatin=PU(4.8=20.0)
A:
NA
C2:
PF0173417=Patatin=FE(31.1=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]