GgaINT0125237 @ galGal4
Intron Retention
Gene
ENSGALG00000008736 | PNPLA7
Description
patatin-like phospholipase domain-containing protein 7 [Source:RefSeq peptide;Acc:NP_001124214]
Coordinates
chr17:1656490-1669020:+
Coord C1 exon
chr17:1656490-1656608
Coord A exon
chr17:1656609-1668863
Coord C2 exon
chr17:1668864-1669020
Length
12255 bp
Sequences
Splice sites
5' ss Seq
CAGGTAGGT
5' ss Score
10.28
3' ss Seq
TCTTTTTCTTCTCTGCACAGGGG
3' ss Score
10.51
Exon sequences
Seq C1 exon
ATAGAGATGTATGAACGTGTGTTCCAGAAGCCACCAGACCGCCACTCGGACTTCTCTCGCCTGGCTCGTGTCCTGACTGGAAATGCCATTGCCCTGGTCCTTGGTGGTGGGGGAGCCAG
Seq A exon
GTAGGTCCCAGAATGTTCTCTGGTGTCGACTGCCAAAGGTCCCAGCCTGCTGCTGTGTGTCCTGTGGCGTGTCCTGGACATGTGGATGCGTTGCTGTGGAGTCCCAGAGCAGCACTGTTGCAGAGTTGTGATTAGATCAGAATAACAGGCATCCTATAAAATCTGCACTGTTCCATAAATAACGTTCTGGAGAGAGGCTGAGGAGATGTTTTTCTTATTCAAACATAATTGGGTGGATTTTTGTTTGGATTTCTGTGGAAGGAACACAAGTAGGAACGTGAGTGTTTGGTACTGAGTATTTGTTATGAGCCCTCTCATATATTGGGCATAGTGCCAGGAGATGATGAGGGTAAATGTGACCCTTCTTTCTTATTCTGGCCTACACTATGGGTTTTTCCCAATGGATTCTTGCATTAAAAAGTGGCTCATGATATTTCCAAGGCCCTCAAAGCTTTTCAAAGTCTAGACAGCCAGAGGAATTACATTCTCTGATGTGAGAATGTTCTCCTCTTTAAAATGATGTGATACCTCAGGTACATGTATGCTTCTCACAGCCCTGCTTCCCTGGAAGCGTGTGTGTCTGCAGACACCAAGGTAGGACATGTGCTGAACACTCCGATTAGGATTCCAACTGAGTTACAAGTGAGCTTTGGAAATGCATTATTACCAGTGGCTTTCTTTGGAATTCCTTTCAACTTTGAGACTTTTCTGTTGAGAAAGATGTAGAATTTAGTATTCAAGAGGGAACCAACTTCATTATCTTCATCACCATGTCCTTGCCCTTCTTTAAAACAGTGCTTTGAAATACTGCTCTCAAATATAAATACAAATACATATATTGCATATTTGATTCAAATCCATGAAGATACCACATTTTTGTCTTGGTACCACCACGTGCTTTGGGGAGGGAATATTCCCTATAAGTAAAGGTTAGAACTCCTTTGTGACAGCTTGTTCTGATTAGTCACTTGATGCTGAGACAGCCAGTGCTTTGCTTTGGCTGTTTCTTCGAGTGTCTGTAAAGATGCCTTTATCCTGGTTGCTTTCACAGTTTCCTCACCCAAGATGATTTCAGTATTTCATTTCTGAGATAAACACTATCCTATGGAGGCACAAGATAAAGCAGAGGAAGGGAGCTTATACTTAATCTGTGTGTCTCAGTAGATTTCTTATCAACTGATCATAAAGCACTGGGTTTCTTGTGGGTTTTTTTGGTTGTGTTGTTTTGTTTTGTCACTAGCTATCTGAGATCTCTCTTTACTGAAGCCTATGCTATGCTAAAATACACGTACTGTATCTTTCTGGCAGCACATTTTGCTTATTCCCTTCCTTTCTTCCTTCTGTAAACACTGCTGTAGTTTTTGCTGAACTGTTTTTTTTTTTGTTCTACTGCTTAATTTGCAAGCTACCACCTGTTGGTGTTCGAGAGCAGGGGTAAGAGCAGGCTTGTTAGAGCCTGTTTGTTGGTCCTGTGTTGTCTTCTTCCCCAAATCTGAGGCACTGCACAGCTGCTGCGTTCAGCTTTTCTGGATGCAGTCACCTATTCAACAATGTGCTCACGTCTCATCAGCCATTAATTTGTCCATCTCTGCATCTGTGCAGTATGGAAGACTTTAAGAGGGTAAAATGGCAGACAGTGGGTAAATGTGATGCTTCCTTCTTGTTCTAACATCCTTTCTTACATTTCATGGCCCAAGAAGCTCTCTTTTTCTGAGAGCTCATGCTGGTGGCACATGGATGGTGGGAGCATTGTGTTTTTCAACAGAAAGGTTCCTGCATGCTATTTCTGTAGCTGGATTGTCATCAAAATCGTGGTTGGATGAAAGACTGATTTTTTTGTTGTTTAATTTGTTTTCCAAGAGAGAGTACAGTTCAGACTCTTGGGAAAGGATAGAGTTATTCTGAGCTCTGTACAAATCTGCCTTTGAAAGCTTTGCAGGCCAAAGGTCTTAGAAGGGGCAAGAGATTGTGCATTGGGTACTGGAAATCATCCTCTGATTAAGGCCTGCCTGACTAAAACCAGCATGACGAGTGGCTGCTCAGACTCCTGCTATTCAGTGTAGCCTTTGGATAGTGCTCTACATGAAGTAACCTCTTGCATTGCCCTGGAAGCATGAGTCATACTGGGCTCAGAAACAGCATAGGGCGCTGGCTGGCCCTTTCAGTGGGAGGTGCTGTGCTCTGTGGCTCCAGTAATATCAATTATTTGGTTGTTATTTCTGGAATGTTTGTCTGGCTTCCCAGTGACAGTCAGTTCGGGAGGTTTTACCCAGGCAGCTTCCTAGTCATTATCTTAGGTTTGTCATGACAAAAGGCGCGTAGGAACTGAGGGTTTTCTTTCTCTTGTGAAGTTAAAAATATAACAAATCCAAGTGATACAGTTCTGAAATTACAGTGTTTTGCTGTAGTGAAGTGCTCACTTAATTTCAGCGAGAATCGCCGAGGAGTTTGGGGGAAGGAAGAGAGATTTGAGTTTAGAAAAATAATACCTTTGAAATGTAGTTGCGAGAATAATGACACAGCAAACCCTGCAATAAAGGCACGAACCTCCCATACGTCACCGCCGTGAACCTCAGCCATCCCACACACAGCCCACCCTTCCTTTGGCTTTCCGTAGCTGTCTTAGCAGAGCTGTTGGAAAGCTAACATTTACGGGCAGTAAATACTCAATAGAGAAGTGTCGGAGAGTCCCTGGGGCTGTGGAGAAAAACAATTGGTCGTGATGTTGCAGAAGGCTGACTGACACTGCATGGTGATGACAAGCCTTGTTGTTGATGATAATGTCATTCTTGTAGGAGTTAATTTGCTCCAATGCGCCGATTCTGAGTAAGACACATTAGGAAAATACAGAGCATTAAACGCATTTGTTTGGGTATTTTGATGAGTGCTGTGCAATACAAACACACCATGCGCATCAGAGATGCTGCAAGCACTTTCTTGCCTTTTCTGGGTGCTGTGCCTGATGTGATGAGCTGTGCTGGGTGCTGCTGCCTTCCCCTACCTGCACACGTGCAGCCCATGTCCCGCTGCTGTCCCGGCTCCACAGTGCTCTGCTTCTCCATTCCTTCCAGCACTTTCCTTCAGGCAGAGAATGGCAGCCTCCTCTGAGAGCTGCTGCTGGAAGGTGTTTCTAGGTATTTATTTCATCTCTTCTCTTTTCCCCACTCAGTTTTCTCCCCAGCAAAAGACTCAGAGCTCTTGGAATGGGTCCAGAGGAGGGCCACTAAGATGATCAGAGGGCTGGAGCACCTCTCCTGTGAGGAAAGGTTGAGGGAACTGGGCTTGTTCAGCTTGGAGAAGAGAAGAATGGAGACCTCATTGTGGCCTTCCAATACTTGAAGGGAGCATATAAACAGGAGGGGGAATGGCTGTTTATGAGGGTGGATGGTGATAGGACAAGGGGGAATGGTTTTAAACTGAGACGGGGAGGTTTAGGTTGGATGTTAGGAGGAAGGTTTTCACCCAGAGGGTGGTGACGACTGGAACAGGTTGCCCAAGGAGGTGTGGATGCCCCATCCCTGCAGGCATTCAAGGCCAGGCTGGATGTGGCTCTGGGCAGCCTGGTCTGGTGGTTGGCGACCCTGCACATAGCAGGGGGTTGGAACTGGATGAGCATTGTGGTCCTTTTCAACCCAGGCCATTCTAGTATTCTATTACATGATTTTGCCTCAGTTCTTGAGAAGTAAGGTAGATTTCTCCCATCCCCTCCCCCCCTCCCCCCACTTGTTCTTGCCATCTCTAAGGGTTTGACTAATTGCTGCCTTTTCATTTTGGGCAGTTGGCCTATTTAATCAACTTCTTTCTGCCTTTTCTTCTTTATTTTCAGCACTGGTCCTCTGGAAAAGGGAGGATAAAAGCAGCCCAGGAGCAGCACGTTATGCCTTCCTTGTTATGGGCTTGCTCGTGTCTGAACCTCTTCTTCCTCATCTCCTTCCCTGTGTCCCCAAGGCACTGAGTGCCCAGACCCCGTGCTTTTGGAGGCCGGGTGCTGCCTGGTGACTGCTTGGTGCTGAGCCTCGCTTGGACCTCTGTGCTCCTTAGAGCTGGGTTTGTTTTTCCTATTCAGGGACTTTAACCAGTGATCCAAAGATAGAGAGGGTGCCTGAGTGGCAAATCTCATCATCCTTTTGCTCTGAGGAAACCACATTTTCCTCTGTACCCTCAGTGCCTGACTCCAAGATCCCAACCTCTACAAAGAATAAAATCAGGAGGCTTTACTGTCTCCATACTCCTCACATTTGGCTGTAACTGTGATTCACTCAGAGCTGTGTAAGCCCTTTAGCAACAGGGATCTGCTCTGGGCTGCTGTGTTTTGCTCCATAGCCCACAGAAGCAGAGAGAAGTGTTGTCCATTAGTTCCCAAGCTCGGTGGGTTTTGTTGGGCGTAACAGAAGTGAAGGCTCCTGGGTGCGAAGCAGTGGTGGAGCTGATAGGTACATCCCAGCCTTCAGGATGTGCCGAAATGTCTGCTGTGGTGGGGGAAGCCTGGAGTTGGAGGTGATGTACCTTTAGTGAGGTGCAGTCCTCAGGGTTGGGTGTTTTGCTTGCAAAATGCAGACAGCACTCATTTCTCGCAGTGACCTCCTCGCTGTGGTGCACGTGAGGGCAGCGGTGTGGTTATTTAACCCTGACGTTCAACTTCAGGTAGGAACAGAGTCTCCAGGGGAGACTGCATCAAGTTTTTATGGTGCAGGTGCTTCAGATGCAGTTCGGGCAGTTAAGGAAGATGAATTCTTATTCCTCAGCTAAGACTGATAACTGATGGTAAGAGGCTCCTTAGCCAGATCAGTGGAAGGAGTCTGTGTGCAGAAATCCTTCAATACCAGCACTGCAGAGTGCAGCACTGGAAGTGGAGATGTGGGCTCAGGAGATCAATGTCTGCGCCACAGAGAGAAGACAGGAGCTGGAGTTGCCTTTTTGAACAGTCCTCCGTGACCACGAGCACCCAGATGGCAAATGTGTGCCTGGGGAGTGATGGGAGGCAGAGGGGAAGGATTCACTGCCTGAATTCTGAAGCTGTCTCCAGAGATGTGTGCTGAAAACACAGTTATAGAGAGCACAGAGGGGTGCTTTCCTCTATGGGCTTCTAGGTGGATCCACTATAGCGGTTACAGAGGGATGAAGGAAAATCCCCCGGGCATTTCCTCGACTCCCAGCATTCCTCATATACATCAGAATGCAGGAAATACTTTTCGGAGCCTTTGCTGTGTTCAAAACTTGACATAAATGGAGACCAGTGGGAGCACCCCTGGGTATGAGGCACACAGGGATTGAGGGAACCCAAATGTGTTGGTATCACCGCGTCCTCACACTGCAGAATAGAAGCACTGTTCATCTTAAGTTGATTAATTATGCCTCCTCCAAGCTTCCATTCCTATCTAGGTCCCCTCATCCTTTCTCTTGTCTTTGTTAGTCTGTAAGCGTGTTTCCTGTTCAGATATACCCAAGCCCTGAGATTAACCTTTGCATCCTTTCATCCTGCTATCATTCCTGCCTGTTTGCCTTATATCTGCCCTTCTTTTCCTCTCCCAGGATTTAATTTCAAATCCTCTCTCAAAGGAGCTATTAAAAAAAAAAAAAAACAAGAAAGAAAGAAGAAATAGTTTACCAACTGCTGCTCCCATACCGGGACATGTCCTTATTTGTCATCAACAGGCACTGCTTGGCTTTGGAGTAATTCCCCCTGGATCACACAGTGTGCTTTGGGACTGCGCTGCCTTTTGCAAAGAGGTGATTGATGGCAGTGCTTGGGGTTGCACTCAGTGCTTTATAACGGGGTGCAGGTGTGCCCTGCATTTGTCAGCCATCTCACTGTGTTTAGAATTCACGGTCAACGGAGGGCCAGCAGCTTGAGAAATGTATAAAAATGGTATTCCCACTCTTGGAGATATGAAAATAATATATCCTGATGAAAAGAATTGTTCTGAAGGAGGTTATGAAACAAAATTGCTGATGATAGAATCATTTGTTCTTCATTCTGACCTTGGTTAGGATGACTCCAGAAAGCACCAACAGCCTCTGGTGCCCACAGTGCCATGAATTACTGCAGCCATGGAGGGCAGGCACTGCAGCACGGAATGGGGATTCTCTCTGCTTTGCTCAGCTCCTGCCCTGGGGTAGGGTTGGGCAAATACCTGCAGTGCTTGTGGTGAGCTGTAGAACGAGGCTGCTGCATCTCAGCTTCAGCATCAGCACAGGTCAACCTCTATAGAATGCTCTGAAGCACTTACAGAAGTTTAAACTGTTATCACTATGAAATCTGGGGGCTTTAGCAGGACGTTGTGCTCCCTGAATGTGCGTTCAGCAGTGAGCTGAATGTGTCTGGGCAGTGTGCTTGAAACCTGACATCCAACCCAAGTATTCTGACTAAGTTAACTCTTTATTGCAGTGGTTTAGGAGCAACCAGGTAATCCTGTGTGCGATGTCTGCTTACAGAGCCAAAGCCCACGTGTTCCCCAGGGCTGCTGAGGTTTGAGGGCACCCTCGCCTGGTTTGGCTGCAAAGAGCCCAGTAGTCCCCAGGAAATCCATTGTGGTGCCACTGCTAAATGAAACTGAAATATGAAAGAGGTCTGAAAAATGCTTCTCTCCTTCTTCTAAACCAAAGAATAAAACTGCAGCATTTACAGTCTGTTAGCAGCCAGTAATGATTATGAAGCAAGATTTCCACGGTATTGAAGCGTCAGAATGATCTGAAGGAGGCTGACTCTGCTTCATGTCAGGAAAAGAGCTGAATGCTTGAGATATCCTTGCCCTGGTTCCCTTTCTTCAAAGTAATCCCTTTGTATACTGAGCCCAACCTCAGCCTTGTGGTATTTGCAAGGGCAGGAAGTTAGTGACTCCGGGTTAATCCCCATGGCCTTTGCATTTGTCAGCCCACAGCTCCTGCTCTCCTTCCAGCACAGCCAGCTCACTGCCATGGGGTGCGTTTGGTGGAAGAGAAGCTCTGTGATAACCTGCATTACGTCCGTGTGCTCCTAGCTAGACATCTGTATCTCAGTATTAGAGCTGTGATTGTTCTTTCTTGTATCTCTCTTTCAAGCTCAGATAGATGTATGGGGCTTCAGAGCCTGTCATTGCTGGAGAAGTGGCTTTATGCCCTGTGTCTGTGCTCCTGGGGTGTGCAGAGGATCCATTGCCACGTCTGAGTGAGCCAGACCCAAAAATGAAAACCAAATTCCAGTGTCAGCCATGCGGTGAGGTGCCTGGATTCCCAGAGTCATTCAAACAGCAGATATGGTTCTAGGGCGATGGCTGGGGGCTGAAATAGTGGTGAAGGATTTCAAGTCTTTATCCTTAAAGATAGAATTAGACCTGGGTGTTCTGTTGGTGCTGTTTCCTATAGTCTGATGGGGGGTGATAAGGAGCCTAGGGTCTTCCTTGGAAACAAAGATGGTAACTTATGTTTGGATTCCTAATTTGAGTGACCCAGATCAGCCCTGGAGTGCACTGTTTGAACAAAGCCCATCTCCTAAAAACGAAGCACTGAGGTTAGTATTTGCCTTAGCTCAGAAAATCTCATGAGATGTGGTCATGAACTGAAGGCTTCAGGCCCTTCTGTTTGCAGATGCTCAGTAATGAACTGCAGAGTGATTGCTCCTAAGGGGCTCTGCTTCGGTGTCTTTGGGGATGGTGCATCCCGTGCATTGCCTTGTGCATCGTTTTGAAATTCTGGCTGAAGATTGATCTGCAGTTAGTGTGCAGGGGGGACAAGGTTGGGAGCAGAAGAAATTGGAATGTCACCATGAGGAGGTGGTTGCAAAAGCTTCCCTTGGGGCAGCTGCTGCAAAGGAGCGTGTTGGGATGAGGACCAGGTAATGAGGGCTTATTCCCCTCAAGTCAGCTTAGATGTGGGACTTCATTCTTAAATGTTATCCTGAATGGAAACTTCCTGGTAAGTGTGTGAGGAGCTCAGCAGGAGTGCAGTGTGGTTCCTGTCACCACTTTGAGCTGAAAGCACTGTAGTTCTTCAGGCAAGTGTATGATGCTGGGCAGCCTTACGGTCATGGAACCTAGGAAATAGTGTTGGAAAGGTACACACGTGTCTAGATTTCCAAGCCTTGTTTGTGTGTGGTGTTGCACTGCAGAAGATTAAAGGTGCCATATTGGAGGTGGTCCCCCTTCACCATGCACAAGACTTGCTTCGTTTCTCAGTCTGGAATGGAAGCCCTGTGTGACCTGAGCTGCTTGCTCTGCTGTCTGTCCCTGCAGTGCAGGTCGGGGCAGCACGATCTGTTCTGCAGCTTCACCACCCCGTAGTCATGCTCAGAAAATGACAGCTCTGCATGCTTGTGGAACTACGTTCCGTGTTGTTGGTGGGAAAGAATATTGGTGCACCATCTCTGCTTTGTAACTGATCATTTTTTCTTCAGCCCCCTGACCAGAGTGTGGAGGCCAGCCTGTATTCCTACAGACAGCATACTCTGAAATGTCCTGCTGCATTTGCTGCCTTTTTCAGTGGGTCGTATCTAATGAGAGCTCTGGCAGCACACACAGAGCAGACACATCACTGCTCTCAGAAGAGTTCTTCTTTTATCAGTTGAGCTCTGGCCTCCGTGCAGCAGAGTTGCATGCCAGCAGCATCTCCCCAGGAGATGAAAACAGGGGTTTGTTTCAGGAGCAGGATTTTTGCTGCAAGAGCTCCTGCCAGAAGGGCTGTGCTCTGATTGCCTTGCTGCCTTGTTCAAGAAAGCACATCTTCAGCCCCCACATTCTCCCTTTGCTTTGTGATCGTTTATTTGTAATTATTAACAGAAAAGAAGAAAGGGTGCTTGGAATTTAGGAAGTATGGGACACCTTTTGGAGGCTTCTTAAGCACAAGTAGGATGAGTTTGGTAAGCAGTGCAGTAAGTGGCCAAAGAAGAGAGTGGATGCAGAGAGCAGTCCCTAATTTGCCTTGCTCAGGTGAGGTTGCAGGGTAGTAATGGCAGTGGCAGCAGAGTGGGGCTCCTGTTTCACTTCCTCCTTGACCTGGTGGGTGCCATTTCTGCTCTCAGTGAAGGGCACAAGTTAGCCAAGCTAACTTCAATCACTGAAGGAGTGATATACAATAGAAAGGAATTCTTGTTTATATATAGTCTGAGCTTTTCTGGAGCACTAGGCAATACTTTGGGTTCTGTTGCATGTTATTTGAAAGTCATCTTTAGGTCATTTGTCCTTGGTGCAAGGGGTCCTTGTCCTTAACCCTGCCAGGAGGTGCTCTCAGCACTGGGCAGCAGCACAGCATGCATTCCTCCATCTGATCTCCCTCCCCATTTCCAGCTGGACTCTGTTCTTCCTCCTGACCTCCGTTCCTGGGATTCTGGGCTCTTGTGCCAGAGATTTTCCAGCCCCTTTCTCCATTCTTCCCAGTCCTCTGGCATTGCTGCATCCGTACAGCTTCACCACGAGCAACCTTTGTACTGCGTGTGCCAAACACTTGCATCTTCACATGTCGCCCCGAAACAGGACAAGTCCCCTGTGAAGTTGTGCCTGGTATTACAAGAAGCACACGATCCTTGTTTCTTCTGCCCCAGTACCCAGGCTGTTAGCAGGGACGTAGCTCCTGAATTTCCTTCCTTCTCCAGTTGCTGTGGCTGTGTGAGGCAGTGGTGGGCTGTCACCAAGAGGGCTGTGTGCAGCCTGGCACAGCTCCTGCCCAGGAATGCTGCTTTCTTTGGCAGTGTGCCTGTGTTTGTGGATGCTGCAAGCTGGGGAGAAGAGGACAAGAAAGGCTCCAACTGCGACAGGTTGGTGCAAAGTCGCATGTAGTGTTGTTGCTGGGAGTAGTGATGGCCTAAAGGTGCAAAGAGAGGGAGAAATGTTTAGGAAGTCATCTTCCAGCAGGCTGGAGGTACGTAGAGAAATGGAGTGGGTTTGGACATGCTCACTTTTCTGAAGTGTCTGAGTTTACACAAGCATGTTTCATCTTGAAGATGTTCAGGATGCTGGAACTGGGGGAATCAGTTTTGCAACCTTGTGTAAGCAGTCAGAGTCATAGAATGGCTTTGGTTGGAAGGGACCTTGAAGGGTCATCCAGTTCCAACAGCCCTGCCTAAGGCCTATGGCAGGGTTGCCAACCACAGGTCAGGCTTCCCAGGATCCCACCCAGCCTGGCCTTAAGTACTTCCAGAGATGCAGCACCCACAGCTCTGGGCATCCCATTCCATGCTTCACTGCCTCTGAGTAAAAAATTCCTTCCTAACATCTAACCTAAATCTCCCCTCTGTTAGTTTAAAGCCATTCCCCTTTGCCCTATCACTGTCCAACTGTGTAAAAAATTGGTCCTCCTCCTGCCTGTAAGCTCCCTTCAGGTACTGAAGGGCTGCAATGAGGTCTCCCTGGAGCCTTCTCCAATCTAAATAAGCCCAAAGCCAATAACCAGAACAAGTCAATAGGAGATCCCTTTCAGAGCAAACAAAGTGCTTTCATTTCTATCTTATTGGTCAGCGCACTGAAAGCAGTCCGTGCTTTGGAGATGAGGAGCTGATGCACACTTGGCTGGGAGGTGGAAATATCCCCAGGGACTTTGCCTGTACAGGGCAGGGAGATGATGGTTTGCCAATAGAAGCAGCAGTAATCTTTTGTGATTCGTTCAAGGGCATCATACAGTGAAACAAAACCAAACCCAGTGTGATCACATCAAATCCTCGTTTTCTGGATGCATGAATGTGTAGATGAGGAGATCCTATTTTGGGAAAGGTTCAAGGGAGGCAATCCAGGGTGAAGCTAGTCCTGACCAGCCTAAAATCACACTCTGAGCAGGAAATGCTTTATGGTAATGAATGTGTGGAAATGAATCCATGCAATGCAGGCGCTCTCCAGAAAGCAGGTCTGGTGGCACAGGGGCTGCTCCTCAGCATAGTGTCAGTATCAGAGTGTCCTTCATCCCTGAAGGCATCCGAGGCCTGGTTGGGTGGGATCCTGGGCAGCCTGAGCTGGTGGGGGGCAGCCAGCCCACGGCAGGGGATGGAGCTGAGGTTCCTTCCAACCTATGAGAAGAAACAATAGGAAAGCAGCAGGAGAATTCAGGGAGGAAAACAAGATGAGTTACTCTCAGCTCCTGCTTTACACCAGTGCAGATCTGTCACTGAAGTCATTTACACCGGTACAACTGAGAACCTGCCTCAAAGCTTGTCAGCAGCTGAAGGGGATTTATTTTAGATGGAAAGAATGTGTTCGGCATAGCTTGGCCAAATGACACCTACAGTGGACTTGGCAGCTGTTAGCAAGTATTTATGGGATGTAAACAGCAAAGGGAAAAAGGACGGAAATAGAGCGAGCTGCAGGGGAGTGGAAAAATGGGATGAAGGTGGGGAAAGGAAGTTTGTACAGCTGTGTGGCTGAGGCTGCAAAGAGTCCGTGCAGGTGAGCTGAGCGAGCTGATGTGTTGGCATTACCTGCACACAGCACCGAGGCTTTCTGTGCTTAGTTGCTGACAGCCCCATAACTCTGATTCGTGCAGCCTACATTTAAATCCAGTTGTGATTTGACTCCTTTGGCATGTGGGCACAGTGGGTTCCCCAGTTTGTGTTATGTGTCTGTGTGTAAATCCTTCCCATAACGCCAGCCTTTCCATGCAGTGACCTCACCAGGTAGCCCCATGTCCCCCCGCTCGGAGATGCTTTGCTATTTTTTTTCTTCTTATCCCATCAAAGTTCATCTGTCTTATCACCAGTGTCCATCATTGCTCTAAGGTCCTTCTGCCACTGTTGATGTCAAGGAGGATTTTAGATTTACTGTCCCAAAGGACTTGGGATCATCCTCTAACACTGCCTCCTCATCTGCCTCTTGTCTGTGTGCTGAATGGAATTGCTTCTTTCTGATAACTGCTTGTCTCTGTTTGCTCTGCTTTCCATCTTCAAATCCATGGTTAGTCCATGTGCTGAGCCATCCCATCACCACAGTCTGGCTGAGGTTCTTGATTCTTCTTCCAGTGATTCTTCTTTCCCAAAGGTCTCTGGAATGCACCCATCCAGTGCTCCAGAACAGCCCTGGTAGGCATTGGATGCAGTGCTCTCTTGAAGCCATGCTGACTCTTCCCTCCATGGTTTACCTCCTGGCTGTTCCCGTGTTGCTGTCCTTCACACTGAAATCAGGGAGACTTTTTTGAAGCCTTCTGCTGTCATTCTGCATTTCCTGTGTCTGGCTCTTGTTTAGCAATGGAATGGCAGTTCAGCTGGCGTACATTCAGGCCCCTTTAGAAGGCAGCATTGATGTGTTCTTGGTTTCTCAGTGGCTGTTTGTCTGATAATGTGTCTTTTTCTTCTCTGCACAG
Seq C2 exon
GGGGTGCTCCCAGGTCGGGCTTATCAGGGCGCTGATTGAAGCTGGCATCCCCGTGGATATGATTGGAGGAACGTCCATCGGCGCTTTCATGAGCGCTCTGTACGCAGAAGAACGCAGCTACAATCAGATGAGGATCAAAGCCAGGCAGTGGGCCATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000008736:ENSGALT00000040268:25
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0173417=Patatin=PU(4.8=20.0)
A:
NA
C2:
PF0173417=Patatin=FE(31.1=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]