HsaEX0004403 @ hg38
Exon Skipping
Gene
ENSG00000107890 | ANKRD26
Description
ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:29186]
Coordinates
chr10:27086539-27093522:-
Coord C1 exon
chr10:27093349-27093522
Coord A exon
chr10:27092406-27092512
Coord C2 exon
chr10:27086539-27086609
Length
107 bp
Sequences
Splice sites
3' ss Seq
TTGTTTTTGCTGTCTTACAGGAT
3' ss Score
12.23
5' ss Seq
AAGGTACAG
5' ss Score
8.04
Exon sequences
Seq C1 exon
GCTGTACAATGCCAGGAAGAGAAATGTGCAACTATTCTGCTAGAACATGGTGCTGATCCAAATCTTGCGGATGTCCATGGCAACACTGCTCTTCACTATGCTGTCTATAATGAGGACATATCAGTAGCAACAAAGCTGCTTTTGTATGATGCAAATATTGAAGCAAAAAACAAG
Seq A exon
GATGACCTCACACCACTTTTACTTGCAGTAAGTGGAAAAAAGCAGCAAATGGTGGAATTTTTAATAAAGAAAAAAGCAAATGTAAATGCAGTAGATAAGTTGGAAAG
Seq C2 exon
CAGTCACCAACTAATTTCAGAATATAAAGAAGAAAGGATACCTAAACATTCTTCTCAAAATAGTAATTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000107890-'4-11,'4-8,7-11
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.724
Domain overlap (PFAM):
C1:
PF127962=Ank_2=PD(24.5=39.7),PF0002325=Ank=WD(100=56.9)
A:
PF0002325=Ank=WD(100=91.7)
C2:
NO
Main Skipping Isoform:
ENST00000376087fB395
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development