HsaEX0004407 @ hg38
Exon Skipping
Gene
ENSG00000107890 | ANKRD26
Description
ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:29186]
Coordinates
chr10:27079089-27086609:-
Coord C1 exon
chr10:27086539-27086609
Coord A exon
chr10:27082803-27082833
Coord C2 exon
chr10:27079089-27079161
Length
31 bp
Sequences
Splice sites
3' ss Seq
TTTACTTTTCTCTTTAATAGTGG
3' ss Score
8.25
5' ss Seq
CAGGTAGTA
5' ss Score
5.89
Exon sequences
Seq C1 exon
CAGTCACCAACTAATTTCAGAATATAAAGAAGAAAGGATACCTAAACATTCTTCTCAAAATAGTAATTCAG
Seq A exon
TGGATGAAAGCTCTGAAGACTCCTTAAGCAG
Seq C2 exon
GCTTTCTGGCAAACCGGGTGTTGATGATTCATGGCCTACCTCAGATGACGAAGACCTCAATTTTGATACTAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000107890_MULTIEX1-1/2=C1-C2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.724 A=0.869 C2=0.980
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
PF139001=GVQW=PD(7.7=12.0)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development