HsaEX0072811 @ hg19

Exon Skipping

Gene

ENSG00000171649 | ZIK1

Description

zinc finger protein interacting with K protein 1 homolog (mouse) [Source:HGNC Symbol;Acc:33104]

Coordinates

chr19:58096320-58101566:+

Coord C1 exon

chr19:58096320-58096358

Coord A exon

chr19:58099907-58100033

Coord C2 exon

chr19:58101379-58101566

Length

127 bp

Sequences

Splice sites

3' ss Seq

ACCTGTCCCCATCATGACAGGGC

3' ss Score

7.71

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

GTTACTGTGTCTCCAGAAACACATATGGACCTCACAAAG

Seq A exon

GGCTGTGTGACCTTTGAGGACATCGCCATTTACTTCTCACAGGACGAGTGGGGACTTCTTGATGAGGCTCAGAGACTCCTGTACCTTGAAGTGATGCTGGAGAACTTTGCCCTTGTAGCCTCACTGG

Seq C2 exon

GTTGTGGCCATGGAACAGAGGATGAAGAGACACCTTCTGACCAGAATGTTTCTGTAGGAGTGTCACAGTCAAAGGCAGGTTCATCCACACAGAAGACTCAATCCTGTGAGATGTGTGTCCCAGTCCTGAAAGATATTTTGCATCTAGCTGATCTCCCTGGGCAGAAACCATACTTGGTTGGAGAATGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000171649-'1-2,'1-1,2-2

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.077 A=0.000 C2=0.155

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=7.1),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF132401=zinc_ribbon_2=WD(100=8.8),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=6.2)

Main Inclusion Isoform:

ENSP00000472867