HsaEX0073244 @ hg19

Exon Skipping

Gene

ENSG00000198105 | ZNF248

Description

zinc finger protein 248 [Source:HGNC Symbol;Acc:13041]

Coordinates

chr10:38117693-38145265:-

Coord C1 exon

chr10:38145224-38145265

Coord A exon

chr10:38126913-38127039

Coord C2 exon

chr10:38117693-38122044

Length

127 bp

Sequences

Splice sites

3' ss Seq

AAAAGAGTATACTATTACAGGAA

3' ss Score

1.75

5' ss Seq

TAGGTAAGG

5' ss Score

9.31

Exon sequences

Seq C1 exon

CTCTCCTTCCTCCACTAAGAGCGGAAAATGAACAAATCCCAG

Seq A exon

GAACAAGTGTCATTCAAGGATGTATGTGTGGACTTCACTCAGGAAGAGTGGTATCTGCTGGACCCTGCTCAGAAGATTCTATACAGAGATGTGATCCTGGAAAATTATAGCAATCTTGTCTCAGTAG

Seq C2 exon

AAAGGAAATGGAAAGTTGATGACGTGTTAGAGAGCAGCCAGGAAAATGAAGATGACCATTTTTGGGAGCTTCTATTCCACAACAACAAAACAGTAAGTGTAGAAAATGGAGATAGAGGAAGCAAAACTTTCAATTTGGGCACAGACCCTGTTTCTTTAAGAAATTATCCCTATAAAATATGTGACTCATGTGAAATGAATTTGAAAAATATTTCGGGCTTAATTATTAGTAAAAAGAACTGTTCCAGAAAGAAGCCTGATGAGTTTAATGTATGTGAGAAATTGCTCCTTGATATTAGGCATGAGAAAATCCCTATTGGAGAGAAGTCTTATAAATATGATCAAAAAAGGAATGCCATTAATTATCACCAGGATCTCAGTCAGCCAAGTTTTGGCCAATCTTTTGAGTATAGTAAAAATGGACAAGGCTTCCATGATGAGGCAGCATTTTTTACAAATAAGAGATCTCAGATAGGAGAGACAGTCTGTAAATATAACGAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198105_MULTIEX2-4/5=2-C2

Average complexity

C3

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.200 A=0.000 C2=0.053

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF079757=C1_4=WD(100=8.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.2)

Main Inclusion Isoform:

ENSP00000349882