HsaEX0073244 @ hg38

Exon Skipping

Gene

ENSG00000198105 | ZNF248

Description

zinc finger protein 248 [Source:HGNC Symbol;Acc:HGNC:13041]

Coordinates

chr10:37828765-37856337:-

Coord C1 exon

chr10:37856296-37856337

Coord A exon

chr10:37837985-37838111

Coord C2 exon

chr10:37828765-37833116

Length

127 bp

Sequences

Splice sites

3' ss Seq

AAAAGAGTATACTATTACAGGAA

3' ss Score

1.75

5' ss Seq

TAGGTAAGG

5' ss Score

9.31

Exon sequences

Seq C1 exon

CTCTCCTTCCTCCACTAAGAGCGGAAAATGAACAAATCCCAG

Seq A exon

GAACAAGTGTCATTCAAGGATGTATGTGTGGACTTCACTCAGGAAGAGTGGTATCTGCTGGACCCTGCTCAGAAGATTCTATACAGAGATGTGATCCTGGAAAATTATAGCAATCTTGTCTCAGTAG

Seq C2 exon

AAAGGAAATGGAAAGTTGATGACGTGTTAGAGAGCAGCCAGGAAAATGAAGATGACCATTTTTGGGAGCTTCTATTCCACAACAACAAAACAGTAAGTGTAGAAAATGGAGATAGAGGAAGCAAAACTTTCAATTTGGGCACAGACCCTGTTTCTTTAAGAAATTATCCCTATAAAATATGTGACTCATGTGAAATGAATTTGAAAAATATTTCGGGCTTAATTATTAGTAAAAAGAACTGTTCCAGAAAGAAGCCTGATGAGTTTAATGTATGTGAGAAATTGCTCCTTGATATTAGGCATGAGAAAATCCCTATTGGAGAGAAGTCTTATAAATATGATCAAAAAAGGAATGCCATTAATTATCACCAGGATCTCAGTCAGCCAAGTTTTGGCCAATCTTTTGAGTATAGTAAAAATGGACAAGGCTTCCATGATGAGGCAGCATTTTTTACAAATAAGAGATCTCAGATAGGAGAGACAGTCTGTAAATATAACGAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198105_MULTIEX2-5/6=3-C2

Average complexity

C3

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.079 A=0.000 C2=0.054

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.2)

Main Inclusion Isoform:

ENSP00000349882