HsaEX0073420 @ hg38
Exon Skipping
Gene
ENSG00000249471 | ZNF324B
Description
zinc finger protein 324B [Source:HGNC Symbol;Acc:HGNC:33107]
Coordinates
chr19:58451604-58453822:+
Coord C1 exon
chr19:58451604-58451704
Coord A exon
chr19:58452128-58452782
Coord C2 exon
chr19:58453696-58453822
Length
655 bp
Sequences
Splice sites
3' ss Seq
GTGCAAACTCCTGCGTCCAGGGC
3' ss Score
3.98
5' ss Seq
AGGGTAAAG
5' ss Score
5.2
Exon sequences
Seq C1 exon
ACTTCCGGCGTTGGGACTGTCACTTGGCTGCTCGCGTCAGGCCACACCGGTGGTCTGGGCTGTGGCGCGCGGGTCGGGGCCCGAGGCGGGCGGCCAGGAAG
Seq A exon
GGCACTGGTGAGCTCCCGACTTCCGGCAGCCAGGGGGCTGAGGTCCCGAAGGAGGCTCCGAGGGGAGAGTCCTGCGTGTGCAAAACCTGGGAGGGGAGCCGAAGCCCAGATGCTTCTGGGACTGAGCGCTCTCGATGTGGAGCTGGAGTAGAGGGGATGTGTGCGGCTGCAGTAGCAGGCGAGGGAGTGGGCTTTATCTCGAGGGCGTCGGGAGACATAGAAGTTTTGAACAGAATCAGGACATCCTCTGAGTTGGGACTTTAAAACGGTTCCACCGTTTGTTGCGTGGAGAACAGACATGCAGGGGTGTCGGCATGAAGGGAAGAACCGACTGCCACAGTCTGGGCAGCAGTGGAGGTGGGCGACCAGGTGAATTCTGGTGGATCTGCGGATGCATCAGGTGTGGGCTGTTTGAAGAACTAAGTACCCCATGTTGTTCAGCCTGAGCGCCTGGAAGAAGAGAGCTGCTGTAGATAGAAAGGAGAATTGAAAGGAAAGCAGGTTTCCTTCAGGGGAAAGATCAAGAGTCTGGGATGTCCCAGGTTGGTCATGTCACTGGACCTGACGTTGTTGGTGTCCTGGGCTGAGGACAGGGCCTATAAACTGGACTGAAGAAGGCGATGAGCAGTCAGGCGTGCGGAGTTACAGCTTGAGG
Seq C2 exon
GACCTGATGACCTTCGAGGATGTGGCCGTGTACTTCTCCCAGGAGGAGTGGGGGCTCCTGGACACAGCGCAGAGGGCCCTGTACCGCCACGTGATGCTGGAAAACTTCACACTTGTGACCTCACTTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000249471_MULTIEX1-1/2=C1-C2
Average complexity
C1*
Mappability confidence:
100%=100=100%
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0135222=KRAB=WD(100=100.0)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ACTTCCGGCGTTGGGACT
R:
ACAAGTGTGAAGTTTTCCAGCA
Band lengths:
217-872
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development