HsaEX0073597 @ hg38

Exon Skipping

Gene

ENSG00000147124 | ZNF41

Description

zinc finger protein 41 [Source:HGNC Symbol;Acc:HGNC:13107]

Coordinates

chrX:47445879-47456398:-

Coord C1 exon

chrX:47456272-47456398

Coord A exon

chrX:47455921-47456016

Coord C2 exon

chrX:47445879-47449474

Length

96 bp

Sequences

Splice sites

3' ss Seq

GTATCATGTCCTGTTAACAGGGT

3' ss Score

7.79

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GCTTCAGTGTCATTTGAGGACGTGACTGTGGACTTCAGCAAGGAGGAGTGGCAGCACTTGGACCCTGCCCAGAGACGCCTGTACTGGGATGTGACACTAGAGAACTACAGCCACCTGCTCTCAGTGG

Seq A exon

GGTACCAAATTCCCAAGTCAGAGGCTGCCTTCAAGTTGGAGCAAGGAGAGGGGCCATGGATGCTGGAGGGGGAAGCCCCACATCAGAGCTGTTCAG

Seq C2 exon

GTGAGGCTATTGGGAAAATGCAGCAACAGGGAATTCCTGGAGGAATTTTCTTCCACTGTGAGAGATTTGATCAACCCATAGGAGAAGATTCATTATGTTCTATTTTAGAAGAACTGTGGCAAGATAATGACCAGCTAGAGCAACGTCAGGAAAACCAGAATAACCTTTTAAGTCATGTGAAAGTATTGATTAAGGAGAGGGGCTATGAACATAAAAACATTGAAAAAATAATTCATGTGACTACCAAGCTTGTTCCTTCAATTAAAAGACTCCATAACTGTGACACAATTTTGAAGCATACTTTAAACTCACATAATCATAATAGAAACAGTGCAACAAAGAACCTTGGCAAGATTTTTGGAAATGGTAACAATTTCCCCCATAGCCCTTCCTCTACTAAGAATGAGAATGCTAAAACAGGAGCAAATTCCTGTGAACATGACCACTATGAAAAACATCTCAGCCACAAACAAGCTCCCACCCACCATCAGAAAATTCAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000147124_CASSETTE1

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.019 A=0.374 C2=0.210

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.8),PF097235=Zn-ribbon_8=WD(100=6.3),PF134651=zf-H2C2_2=WD(100=3.8),PF0009621=zf-C2H2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8)

Main Inclusion Isoform:

ENSP00000315173