MmuEX6010217 @ mm9

Exon Skipping

Gene

ENSMUSG00000056592 | Zfp658

Description

zinc finger protein 658 [Source:MGI Symbol;Acc:MGI:2652821]

Coordinates

chr7:50822638-50830831:+

Coord C1 exon

chr7:50822638-50822764

Coord A exon

chr7:50823015-50823113

Coord C2 exon

chr7:50827959-50830831

Length

99 bp

Sequences

Splice sites

3' ss Seq

AGATATTCTTCCAACTACAGGCT

3' ss Score

5.16

5' ss Seq

AAGGTGAGT

5' ss Score

10.47

Exon sequences

Seq C1 exon

AGATTGGTGTCCTTTGAGGATGTGACTGTGGACTTCAGCCAGGAGGAGTGGCGACGCCTGGACTCCGTCCAGAGACACCTGTACCAGGACGTGATGCTGGAGATCTACAGCCACCTCTTGGCAGTGG

Seq A exon

GCTACCCTGTTCCTAGCCCTGGGGCCATCTTCAGGATAAAGAAAAGAAAGGAGGCACGGACAGGAGAGGCCAAGCTCCCACATCCTTGTTGGTGTCAAG

Seq C2 exon

AAGTGGAATCAGAGTTTTACAGGCCTCAGCAGAAAGCATCTGAGGAGGCAGCATTCCAAACTAGTAAGGCAAGCGCAGTCACAAGGCATGGCTTGTGGTGCTCGATTTTAGAAGAACTGTGGCAAGATCCTGACCCTGCACAAAGAGATGGGCAAAACCAGATCCCACCCTGGAGTCCTGGGGCTTCCCTCAACAAGAAAACAGCGCGAGCAGATAGAGACTGTGGGTGGAAAGAGCCCGGGAAGACCACTCCCTTCGTAGCTAACCTTTTTTCTACACAAAAGGGAGCTCCAAGGTTACTTGCAAAACGTTTGAACCCTAACCTTGAAGCCAACGGTGAAGAGCAAGGCAGTGTCACAAAACAGCTGAATGGTCTTGTTACATCTGCTCACCTCCTCCCGCAAGACTCTTCTAATGCTAACTGTACAATTCTTCGTGAAACATGGAATCCGTGCAAAGGTAACCAGTGCAGAAAAGTTCCCACCCATAAACAACTGACA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000056592-'2-4,'2-3,3-4=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.023 A=0.088 C2=0.170

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.1),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.2),PF0009621=zf-C2H2=WD(100=3.0),PF0009621=zf-C2H2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.4),PF097235=Zn-ribbon_8=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.4),PF097235=Zn-ribbon_8=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=PU(88.5=3.0)

Main Inclusion Isoform:

ENSMUSP00000005597