HsaEX6096488 @ hg19

Exon Skipping

Gene

ENSG00000105497 | ZNF175

Description

zinc finger protein 175 [Source:HGNC Symbol;Acc:12964]

Coordinates

chr19:52084644-52092993:+

Coord C1 exon

chr19:52084644-52084770

Coord A exon

chr19:52085040-52085135

Coord C2 exon

chr19:52089880-52092993

Length

96 bp

Sequences

Splice sites

3' ss Seq

GTATCCTTTCTAATTAACAGGGT

3' ss Score

7.38

5' ss Seq

AAGGTGAGT

5' ss Score

10.47

Exon sequences

Seq C1 exon

GCATCAGTGTCATTTGAGGACGTGACCGTGGACTTCAGCAGGGAGGAGTGGCAGCAACTGGACCCTGCCCAGAGATGCCTGTACCGGGATGTGATGCTGGAGCTCTATAGCCATCTCTTCGCAGTGG

Seq A exon

GGTATCACATTCCCAACCCAGAGGTCATCTTCAGAATGCTAAAAGAAAAGGAGCCGCGTGTGGAGGAGGCTGAAGTCTCACATCAGAGGTGTCAAG

Seq C2 exon

AAAGGGAGTTTGGGCTTGAAATCCCACAAAAGGAGATTTCTAAGAAAGCTTCATTTCAAAAGGATATGGTAGGTGAGTTCACAAGAGATGGTTCATGGTGTTCCATTTTAGAAGAACTGAGGCTGGATGCTGACCGCACAAAGAAAGATGAGCAAAATCAAATTCAACCCATGAGTCACAGTGCTTTCTTCAACAAGAAAACATTGAACACAGAAAGCAATTGTGAATATAAGGACCCTGGGAAAATGATTCGCACGAGGCCCCACCTTGCTTCTTCACAGAAACAACCTCAGAAATGTTGCTTATTTACAGAAAGTTTGAAGCTGAACCTAGAAGTGAACGGTCAGAATGAAAGCAATGACACAGAACAGCTTGATGACGTTGTTGGGTCTGGTCAGCTATTCAGCCATAGCTCTTCTGATGCCTGCAGCAAGAATATTCATACAGGAGAGACATTTTGCAAAGGTAACCAGTGTAGAAAAGTCTGTGGCCATAAACAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000105497-'2-4,'2-3,3-4=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.023 A=0.212 C2=0.126

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF097235=Zn-ribbon_8=WD(100=7.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2)

Main Inclusion Isoform:

ENSP00000262259