MmuEX6010219 @ mm9

Exon Skipping

Gene

ENSMUSG00000055102 | Zfp819

Description

zinc finger protein 819 [Source:MGI Symbol;Acc:MGI:1921650]

Coordinates

chr7:50867353-50873586:+

Coord C1 exon

chr7:50867353-50867479

Coord A exon

chr7:50867917-50868009

Coord C2 exon

chr7:50871757-50873586

Length

93 bp

Sequences

Splice sites

3' ss Seq

AGTATCCTTCTAATCCACAGGGT

3' ss Score

6.92

5' ss Seq

AAGGTGAGC

5' ss Score

9.6

Exon sequences

Seq C1 exon

AGATTGGTGTCCTTTGAGGATGTAACTGTGAACTTCAGCCAGGAGGAGTGGCAGCACCTGGACTCCGCCCAGAGACGCCTGTACCAGGACGTGTTGCTGGAGATCTACAGCCACCTCTTGGTAGTGG

Seq A exon

GGTATTCCAGGCCAGAGGTCATCCTCAAGATGAAGAAAGTTAAGGACTCGCCGATGGGGAAGGTTGATTTCCCACATCAGAGGTGTGGTCAAG

Seq C2 exon

GGGAGGCAGAGCATGACTCACACCAAATGTGTGTGAAGGCTGCATTTCCAAATGATGTATCAAGAGTAATCACTACAGGTGGCTCATATTGTTCCATTATCGAGGAACCGTGGCAGGGTGGTGACCCTAAAACTTCAGATCCGCAAAACCACATCCCACCCTCGAGTTCTGGTGCTTTCTTCAGCCAGAAAACACTAATCACAGATGGACGTGAAGCAGCTGGGGGATCCATTCCTTTAGGCGCCCACGTCATTTCTACACAAAAGAGATCTCTGAGATGTTGCCCGTGTGAAAAGACGTTGCAGCCTCACCTTCAAGCAGACAGAGACCATCAAAGCAGTGCCACAGAGCAGCCTGACGGCATTGTTGACTCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCTGTGTGTCCAATTCACAGCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCATGGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000055102-'8-6,'8-5,9-6=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.457 C2=0.280

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1)

Main Inclusion Isoform:

ENSMUSP00000032661