HsaEX0073634 @ hg19

Exon Skipping

Gene

ENSG00000130818 | ZNF426

Description

zinc finger protein 426 [Source:HGNC Symbol;Acc:20725]

Coordinates

chr19:9638683-9643601:-

Coord C1 exon

chr19:9643521-9643601

Coord A exon

chr19:9641661-9641743

Coord C2 exon

chr19:9638683-9640312

Length

83 bp

Sequences

Splice sites

3' ss Seq

GTTTGTCTGTTTTATTTCAGGAT

3' ss Score

10.93

5' ss Seq

TTGGTAAGA

5' ss Score

8.85

Exon sequences

Seq C1 exon

GAGGTCAGATCATCAAACCCAGTCTAATCTCTTGGTTGGAACAAGAAGAGTCAAGGACAGTTCAGGGAGGAGTTCTCCAAG

Seq A exon

GATGGGAAATGCGACTTGAAACCCAGTGGTCTATACTTCAGCAGGACTTTTTGAGGGGTCAGACATCCATTGGGATACAATTG

Seq C2 exon

GAAGGAAAACACAATGGAAGGGAACTCTGTGACTGTGAGCAATGTGGAGAAGTCTTCAGTGAACACTCATGCCTTAAGACGCACGTGAGAACTCAAAGTACAGGGAACACTCATGACTGTAATCAGTATGGAAAAGATTTCCTTACCCTGTGTGAGAAAACCTCTACTGGTGAGAAACTTTCTGAGTTTAATCAGAGTGAAAAAATCTTCAGCCTGACACCAAATATTGTATACCAGAGAACTAGCACACAAGAAAAGTCATTTGAATGTAGTCACTGTGGAAAATCCTTCATTAATGAGTCATACCTTCAGGCACATATGAGAACTCACAATGGAGAAAAACTCTACGAATGGAGGAATTATGGGCCAGGTTTTATTGACTCTACAAGCCTTTCTGTGCTTATAGAAACCCTCAATGCAAAAAAGCCCTACAAATGTAAGGAATGTGGAAAAGGCTATAGATACCCAGCCTACCTCAGTATTCACATGCGAACCCACAC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000130818_CASSETTE1

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.024

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NO

C2:

PF0009621=zf-C2H2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.0),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2)

Main Inclusion Isoform:

ENSP00000253115