HsaEX0073948 @ hg19

Exon Skipping

Gene

ENSG00000186017 | ZNF566

Description

zinc finger protein 566 [Source:HGNC Symbol;Acc:25919]

Coordinates

chr19:36936021-36980463:-

Coord C1 exon

chr19:36980388-36980463

Coord A exon

chr19:36967451-36967518

Coord C2 exon

chr19:36936021-36940903

Length

68 bp

Sequences

Splice sites

3' ss Seq

TCTTCTTTTGCCTCTCCCAGCTC

3' ss Score

8.81

5' ss Seq

CAGGTGAGA

5' ss Score

9.22

Exon sequences

Seq C1 exon

ACGCGCTGGCGGGACCCTCAGGGCTTTACCAGCAACTACCCCAGTGCCGGGGAGGGTTCTGCTGCTTCGAAAGCTG

Seq A exon

CTCTACCCTTCTCCAAAAGAAGAGCCAAGAGAAGGTCCTTTTCTACAAATATCAGAGCCATGGCTCAG

Seq C2 exon

TCCTGGAATCAAGATGTGAGACCAAGAAATTATTTCTGAAGAAAGAAATTTATGAAATAGAATCAACCCAGTGGGAAATAATGGAAAAACTCACAAGACGTGATTTTCAGTGCTCCAGTTTCAGAGATGATTGGGAATGTAATCGGCAGTTTAAGAAAGAACTCGGCTCTCAGGGGGGACATTTCAATCAATTGGTATTCACTCATGAAGATCTGCCCACTTTGAGTCACCATCCATCCTTCACATTACAGCAAATCATTAACAGTAAAAAGAAATTCTGTGCATCTAAAGAATATAGGAAAACCTTTAGACATGGCTCACAGTTTGCTACACATGAGATAATTCATACCATTGAGAAGCCTTATGAATGTAAGGAATGTGGAAAGTCCTTTAGACATCCCTCAAGACTCACTCATCATCAGAAAATTCATACTGGCAAGAAACCCTTTGAATGTAAGGAATGTGGAAAAACCTTTATTTGTGGCTCAGACCTTACTCGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000186017_MULTIEX1-1/3=C1-C2

Average complexity

C2

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. ATG (>10 exons))

Show structural model

Features

Disorder rate (Iupred):

C1=NA A=0.000 C2=0.070

Domain overlap (PFAM):

C1:

NA

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=7.3),PF0013017=C1_1=WD(100=14.0),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6),PF097235=Zn-ribbon_8=WD(100=12.0),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=7.6)

Main Inclusion Isoform:

ENSP00000376010