HsaEX0073969 @ hg19

Exon Skipping

Gene

ENSG00000196437 | ZNF569

Description

zinc finger protein 569 [Source:HGNC Symbol;Acc:24737]

Coordinates

chr19:37902062-37917280:-

Coord C1 exon

chr19:37917154-37917280

Coord A exon

chr19:37916770-37916865

Coord C2 exon

chr19:37902062-37905321

Length

96 bp

Sequences

Splice sites

3' ss Seq

ATGTAACTTCCCTTTGACAGGCT

3' ss Score

6.92

5' ss Seq

AAGGTTAGT

5' ss Score

8.54

Exon sequences

Seq C1 exon

GGAACAGTAACATTCAAAGATGTGGCTATCGACTTCACTCAGGAGGAGTGGAAGAGATTGGATCCTGCTCAGAGAAAACTGTACCGGAATGTGATGCTAGAAAACTATAACAACTTAATCACAGTAG

Seq A exon

GCTATCCGTTCACCAAACCTGATGTGATTTTCAAATTGGAGCAAGAAGAAGAACCATGGGTGATGGAGGAAGAAGTATTAAGGAGACACTGGCAAG

Seq C2 exon

GAGAAATATGGGGAGTTGATGAGCATCAGAAAAACCAGGACAGACTTTTGAGACAAGTTGAAGTTAAATTCCAGAAAACACTGACTGAAGAAAAAGGCAATGAATGTCAAAAGAAATTTGCAAATGTATTTCCTCTGAACTCTGATTTTTTCCCTTCCAGACACAATCTCTATGAGTATGACTTATTTGGAAAGTGTTTAGAACATAATTTTGACTGTCATAATAATGTGAAATGCCTTATGAGAAAGGAGCATTGTGAATATAATGAACCTGTGAAATCATATGGTAATAGCTCATCCCATTTTGTCATTACCCCCTTTAAGTGTAATCATTGTGGAAAAGGCTTCAATCAGACTTTGGACCTCATCAGACATCTGAGAATTCATACTGGAGAGAAGCCCTATGAATGTAGTAACTGTAGAAAAGCCTTCAGTCACAAGGAAAAACTTATTAAACATTATAAAATTCACAGTAGGGAGCAGTCTTACAAATGTAATGAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196437_MULTIEX1-8/8=7-C2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

Show structural model

Features

Disorder rate (Iupred):

C1=0.011 A=0.000 C2=0.023

Domain overlap (PFAM):

C1:

PF0173211=DUF31=FE(24.1=100),PF0135222=KRAB=WD(100=95.3)

A:

PF0173211=DUF31=FE(18.4=100),PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF097235=Zn-ribbon_8=WD(100=8.3),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9)

Main Inclusion Isoform:

ENSP00000325018