HsaEX0074154 @ hg19

Exon Skipping

Gene

ENSG00000188295 | ZNF669

Description

zinc finger protein 669 [Source:HGNC Symbol;Acc:25736]

Coordinates

chr1:247263264-247265415:-

Coord C1 exon

chr1:247265289-247265415

Coord A exon

chr1:247265033-247265093

Coord C2 exon

chr1:247263264-247264621

Length

61 bp

Sequences

Splice sites

3' ss Seq

TTTATGGGTCTGCATTTTAGGAA

3' ss Score

8.75

5' ss Seq

AAGGTAATT

5' ss Score

8.83

Exon sequences

Seq C1 exon

GACTCGGTGGCTTTTGAGGATGTGGCTGTGAACTTTACCCAGGAGGAATGGGCTTTGCTAGATTCTTCTCAGAAGAATCTCTACAGAGAAGTGATGCAGGAAACCTGCAGGAACCTGGCTTCTGTAG

Seq A exon

GAAGCCAATGGAAAGACCAGAATATTGAAGATCACTTCGAAAAACCTGGGAAAGATATAAG

Seq C2 exon

AAATCATATCGTACAGAGACTGTGTGAAAGTAAAGAAGATGGTCAGTATGGAGAAGTTGTCAGCCAAATTCCAAATCTTGATCTGAACGAGAACATTTCTACTGGATTAAAACCATGTGAATGCAGTATTTGTGGAAAAGTCTTTGTACGTCATTCCCTCCTTAATAGGCATATCCTAGCTCACTCAGGATACAAACCATATGGAGAGAAGCAATATAAATGTGAACAGTGTGGGAAATTCTTCGTTTCTGTTCCAGGTGTTAGAAGACACATGATAATGCACAGTGGAAATCCAGCTTATAAATGTACGATATGTGGGAAAGCTTTTTATTTTCTCAATTCAGTTGAAAGACATCAGAGAACTCACACAGGAGAAAAACCCTATAAATGTAAACAATGTGGTAAAGCATTCACTGTTTCCGGTTCTTGTCTAATACATGAACGAACTCACACTGGAGAGAAACCCTACGAATGTAAGGAATGTGGGAAAACATTCAGAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000188295-'3-2,'3-1,4-2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.113 C2=0.006

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.9),PF134651=zf-H2C2_2=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=7.9),PF134651=zf-H2C2_2=WD(100=8.2)

Main Inclusion Isoform:

ENSP00000342818