HsaEX0074154 @ hg38

Exon Skipping

Gene

ENSG00000188295 | ZNF669

Description

zinc finger protein 669 [Source:HGNC Symbol;Acc:HGNC:25736]

Coordinates

chr1:247099962-247102113:-

Coord C1 exon

chr1:247101987-247102113

Coord A exon

chr1:247101731-247101787

Coord C2 exon

chr1:247099962-247101319

Length

57 bp

Sequences

Splice sites

3' ss Seq

TGGGTCTGCATTTTAGGAAGCCA

3' ss Score

-5.18

5' ss Seq

AAGGTAATT

5' ss Score

8.83

Exon sequences

Seq C1 exon

GACTCGGTGGCTTTTGAGGATGTGGCTGTGAACTTTACCCAGGAGGAATGGGCTTTGCTAGATTCTTCTCAGAAGAATCTCTACAGAGAAGTGATGCAGGAAACCTGCAGGAACCTGGCTTCTGTAG

Seq A exon

CCAATGGAAAGACCAGAATATTGAAGATCACTTCGAAAAACCTGGGAAAGATATAAG

Seq C2 exon

AAATCATATCGTACAGAGACTGTGTGAAAGTAAAGAAGATGGTCAGTATGGAGAAGTTGTCAGCCAAATTCCAAATCTTGATCTGAACGAGAACATTTCTACTGGATTAAAACCATGTGAATGCAGTATTTGTGGAAAAGTCTTTGTACGTCATTCCCTCCTTAATAGGCATATCCTAGCTCACTCAGGATACAAACCATATGGAGAGAAGCAATATAAATGTGAACAGTGTGGGAAATTCTTCGTTTCTGTTCCAGGTGTTAGAAGACACATGATAATGCACAGTGGAAATCCAGCTTATAAATGTACGATATGTGGGAAAGCTTTTTATTTTCTCAATTCAGTTGAAAGACATCAGAGAACTCACACAGGAGAAAAACCCTATAAATGTAAACAATGTGGTAAAGCATTCACTGTTTCCGGTTCTTGTCTAATACATGAACGAACTCACACTGGAGAGAAACCCTACGAATGTAAGGAATGTGGGAAAACATTCAGAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000188295-'4-3,'4-2,5-3

Average complexity

S*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.078 C2=0.006

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=7.9),PF134651=zf-H2C2_2=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=7.9),PF134651=zf-H2C2_2=WD(100=8.2)

Main Inclusion Isoform:

ENST00000366500fB8206