HsaEX0074253 @ hg38
Exon Skipping
Gene
ENSG00000160352 | ZNF714
Description
zinc finger protein 714 [Source:HGNC Symbol;Acc:HGNC:27124]
Coordinates
chr19:21104494-21109644:+
Coord C1 exon
chr19:21104494-21104548
Coord A exon
chr19:21104661-21104755
Coord C2 exon
chr19:21109623-21109644
Length
95 bp
Sequences
Splice sites
3' ss Seq
GTCTTACTGTTATCACCCAGGCT
3' ss Score
6.75
5' ss Seq
CAGGTACCT
5' ss Score
8.16
Exon sequences
Seq C1 exon
TCAACATAGTTTTATTTTCATTGCATCATCAACAGATTTGGTGTTTTAAAAAAAG
Seq A exon
GCTGGAGTACAATGGTGCAATGGCTCACTGCAACCTCCGCCTCCTGGATTCCAACAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTACAG
Seq C2 exon
GATACATGTGCAGGATGTGCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000160352-'11-12,'11-11,12-12
Average complexity
C3
Mappability confidence:
100%=100=100%
Protein Impact
In the CDS, with uncertain impact
No structure available
Features
Disorder rate (Iupred):
C1=NA A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NO
C2:
NO
Main Inclusion Isoform:
ENST00000425625fB8224
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm10)
No conservation detected
Mouse
(mm9)
No conservation detected
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development