HsaEX0074300 @ hg19

Exon Skipping

Gene

ENSG00000162086 | ZNF75A

Description

zinc finger protein 75a [Source:HGNC Symbol;Acc:13146]

Coordinates

chr16:3363049-3368574:+

Coord C1 exon

chr16:3363049-3363175

Coord A exon

chr16:3366912-3367022

Coord C2 exon

chr16:3367190-3368574

Length

111 bp

Sequences

Splice sites

3' ss Seq

TCATTTTGTCCATTTGACAGCAT

3' ss Score

4.81

5' ss Seq

CAGGTAAAT

5' ss Score

8.76

Exon sequences

Seq C1 exon

AGCTTGTTGACATTTGAAGAAGTGGCCATGTATTTTTCCCAGGAAGAATGGGAGTTATTGGATCCCACTCAGAAGGCCCTCTACAATGATGTAATGCAGGAAAACTATGAGACTGTCATCTCTCTAG

Seq A exon

CATTGTTTGTGCTCCCCAAACCTAAAGTGATCTCCTGTCTAGAGCAAGGGGAAGAGCCATGGGTTCAAGTATCCCCGGAGTTTAAGGATAGTGCCGGAAAATCTCCTACAG

Seq C2 exon

GGTTAAAGCTCAAAAACGACACTGAAAATCATCAGCCTGTGTCTCTTTCTGACTTAGAAATACAAGCATCAGCAGGCGTCATATCAAAAAAGGCCAAAGTAAAAGTTCCCCAGAAAACAGCAGGCAAAGAAAATCATTTTGATATGCACAGAGTGGGAAAATGGCACCAAGATTTTCCAGTGAAGAAAAGAAAGAAACTTTCAACCTGGAAACAAGAGCTGCTCAAACTTATGGATCGTCACAAGAAAGATTGTGCAAGAGAGAAGCCTTTTAAATGTCAGGAATGTGGGAAAACCTTCAGAGTTAGCTCTGACCTTATTAAGCACCAAAGAATTCACACTGAAGAGAAACCCTATAAATGTCAACAGTGTGATAAGAGGTTTAGATGGAGTTCAGATCTTAATAAGCACTTAACAACACACCAAGGAATAAAACCATATAAATGTTCATGGTGTGGGAAAAGCTTCAGTCAAAATACAAATTTACATACACACCAAAGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000162086_MULTIEX1-5/5=4-C2

Average complexity

C1*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.263 C2=0.173

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=100.0)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=10.6),PF134651=zf-H2C2_2=WD(100=11.0),PF0013017=C1_1=WD(100=22.5),PF134651=zf-H2C2_2=WD(100=11.5),PF134651=zf-H2C2_2=WD(100=11.5),PF134651=zf-H2C2_2=WD(100=11.5)

Main Inclusion Isoform:

ENSP00000459566