HsaEX0074347 @ hg19

Exon Skipping

Gene

ENSG00000170100 | ZNF778

Description

zinc finger protein 778 [Source:HGNC Symbol;Acc:26479]

Coordinates

chr16:89291127-89295363:+

Coord C1 exon

chr16:89291127-89291210

Coord A exon

chr16:89291963-89292039

Coord C2 exon

chr16:89293102-89295363

Length

77 bp

Sequences

Splice sites

3' ss Seq

TCATTCTTCTTTCTTTTCAGAAT

3' ss Score

12.09

5' ss Seq

ACGGTAAGA

5' ss Score

10.65

Exon sequences

Seq C1 exon

GACATCACCTGTTCCAACCCAGTGTGATCTATTGGCTGGAGCAGGAAGAGGAGTTGAGGGCAGGGCGGAGAGCAGTTCTCCAAG

Seq A exon

AATGGCGACTTAAAACCAAAGGGCCAGCACTTCGGCAGGATAGATCTTGGTTCAGAGCATCAAATGAGACACAGACG

Seq C2 exon

GCAAGAAGCCACAATGGAGGGCAGCTCTGTGACCGCACGCAGTGTGGAGAAGCTTTCAGTGAACACTCAGGCCTCAGCACACACGTGAGAACTCAAAATACAGGAGACAGTTGTGTGTCTAATCATTATGAAAGGGACTTTTTTATTCCATGCCAGAAAACCTTGTTCAAAATTGGAGAGCAGTTTTCCGTGTTGGGTCAGTGTGGAAAAGCCTTCAGCTCTACTCCAAATGTTGTTTCCCAGCAAGCATGCACTCGGGACAGATCTCTTGACTACAGCAGCTGTGGGGAAGTGTTCCTTAATCAGTCATACCTTCAGGCACGTGCGGGAAGTCACAACGGAGAAGAAACATGGAAATGGAAGCCGTGTGGGAAAGCTCTAACTCACTCCATGGGCTGCGCCACACCTGTTGAAATGCATGCCGTCAGGAATCCCCACGTATGTAGGGAATGTGGGAAGGCCTTTAGGTACACTGCCTACCTTACTGGTCGCGTGCAAGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000170100_MULTIEX1-4/6=3-5

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.192 C2=0.021

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.2),PF097235=Zn-ribbon_8=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0),PF097235=Zn-ribbon_8=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.3),PF0009621=zf-C2H2=WD(100=3.7)

Main Inclusion Isoform:

ENSP00000305203