HsaEX6008344 @ hg38
Exon Skipping
Gene
ENSG00000234444 | ZNF736
Description
zinc finger protein 736 [Source:HGNC Symbol;Acc:HGNC:32467]
Coordinates
chr7:64313873-64384594:+
Coord C1 exon
chr7:64313873-64314153
Coord A exon
chr7:64336259-64336385
Coord C2 exon
chr7:64374567-64384594
Length
127 bp
Sequences
Splice sites
3' ss Seq
AAATATGTTTTGTTTTCCAGGGA
3' ss Score
9.39
5' ss Seq
TGGGTGAGA
5' ss Score
6.04
Exon sequences
Seq C1 exon
GATTGAAACGGGTGGGGCCTGGAGCCCTAGCCAATCAGTGGCGCCAGCGTGAAACTGTCCAATCAAGTGCGCAGCTACAGAGGAAGAGGCGGCCTCTTCAATATGGCGGGGCCTTTGTCTCCTAGCTTCCGGGCTCTGATCCTAGTTCGCGTCTCCACTGTTCCATCTCCTCCGTTCCTGGAGTTCCTCGGTGACTCTACTATAGCTTCTGTTATCCTGTGACCTGCAGGTACTGGGAGATCCATAGGGAGGACGGCGGAACATCTGGAGGCTGGGAAATG
Seq A exon
GGAGTGTTGACATTCAGGGATGTGGCTGTAGAATTCTCCCCAGAAGAGTGGGAATGCCTGGACTCTGCTCAGCAGCGTTTGTATAGGGATGTGATGTTAGAGAACTATGGAAACCTGGTCTCCTTGG
Seq C2 exon
GTAATATTGTGCCATATACCAGAGACCAGATCAAAGGCCTAATAAGGACTCTTGTACCTGGAGCCAGGACTTGTGCAGGATGGTGACTCTCATCCCTGAACATTTCCACAGGTGTTATTGTGACATATACCTGTGCCCACCTCCTGAGTGATTTAATAATCCTGCCTGTTATAGCCCACAGATGACATATTGACGTATACCTGGGCCAAGAACCTTGGTGATTTGACTCTCATATCTTAACAGTGTCCTCAGAAGGGACCGTCACATATCTCTGGACCCATCATCTAGGTTATGTGACTCTCCTCTCCTACCTGAACCCTGCTTCCAGTGAAGAGTGTAGCATTTCTAAGCACTGCATCCAAATGACATGACTCTCTTGCCTGGGCCCTTTTAACAGGAGTTGTGACATATCTCTAGGCCCATCACTTAGGTGATGCGACTCTCCTTTCCTGCCTGGATGTTCTCCACAAGAGGCATTATGCCATAGAGCTGAGCCTAGC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000234444_MULTIEX1-4/9=3-C2
Average complexity
C3
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=NA
Domain overlap (PFAM):
C1:
NO
A:
PF0135222=KRAB=WD(100=95.3)
C2:
NA
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CTGGAGTTCCTCGGTGACTCT
R:
CAGGAGGTGGGCACAGGTATA
Band lengths:
250-377
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains