HsaEX6021229 @ hg19

Exon Skipping

Gene

ENSG00000187607 | ZNF286

Description

zinc finger protein 286A [Source:HGNC Symbol;Acc:13501]

Coordinates

chr17:15609701-15624096:+

Coord C1 exon

chr17:15609701-15609815

Coord A exon

chr17:15611469-15611561

Coord C2 exon

chr17:15619373-15624096

Length

93 bp

Sequences

Splice sites

3' ss Seq

TTCTTTTTTTAAATGAATAGGGC

3' ss Score

6.17

5' ss Seq

CAGGTGAGC

5' ss Score

9.6

Exon sequences

Seq C1 exon

GAAACAGTGACATTCAAGGATGTGGCCATGGACTTTACACCAGAGGAGTGGGGGAAGCTGGATCCTGCACAAAGGGATGTGATGCTGGAGAACTATAGGAACCTAGTCTCACTTT

Seq A exon

GGCTTCCAGTTTCCAAACCTGAGAGCTACAACTTGGAGAATGGAAAAGAACCATTGAAGCTTGAGAGAAAAGCCCCCAAAAGCAGCTATTCAG

Seq C2 exon

ACATGGAGACTAGACCACAGAGCAAGGATTCAACTTCAGTGCAAGATTTTTCCAAAGCAGAATCATGCAAAGTTGCAATAATAGACAGACTGACACGGAATAGTGTCTATGACTCTAACTTGGAAGCAGCCCTTGAATGTGAAAATTGGTTAGAGAATCAGCAAGGAAATCAGGAGAGACATTTGAGAGAAATGTTCACTCACATGAATTCACTCTCTGAGGAAACAGACCATAAGCATGATGTATACTGGAAAAGCTTCAATCAGAAATCTGTCCTTATCACTGAAGACAGAGTTCCCAAAGGATCTTATGCCTTCCATACACTTGAAAAAAGCTTGAAACAAAAATCAAACTTAATGAAAAAGCAGAGAACTTATAAAGAGAAAAAACCTCATAAATGTAATGATTGTGGTGAACTCTTCACCTACCATTCAGTGCTTATTCGACACCAGAGAGTCCATACTGGAGAGAAACCCTATACCTGCAATGAATGTGGGAAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000187607-'3-9,'3-6,4-9=AN

Average complexity

A_C2

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.123 A=0.506 C2=0.159

Domain overlap (PFAM):

C1:

PF108153=ComZ=FE(67.9=100),PF0135222=KRAB=WD(100=94.9)

A:

PF108153=ComZ=PD(28.6=50.0),PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=6.3),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.3),PF134651=zf-H2C2_2=WD(100=6.3),PF134651=zf-H2C2_2=WD(100=6.3),PF134651=zf-H2C2_2=WD(100=6.3),PF134651=zf-H2C2_2=WD(100=6.3),PF134651=zf-H2C2_2=WD(100=6.3),PF134651=zf-H2C2_2=WD(100=6.3)

Main Inclusion Isoform:

ENSP00000397163